RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 LCE3BQ5TA77 95 aa5.22□□□□□ -1.57
HDDC2-209ENST00000609477 LCE3AQ5TA76 89 aa5.2□□□□□ -1.58
HDDC2-209ENST00000609477 MT1GP13640 62 aa5.17□□□□□ -1.58
HDDC2-209ENST00000609477 A6NED7 52 aa5.16□□□□□ -1.58
HDDC2-209ENST00000609477 KRTAP25-1Q3LHN0 102 aa5.15□□□□□ -1.59
HDDC2-209ENST00000609477 PP632Q6XCG6 107 aa5.15□□□□□ -1.59
HDDC2-209ENST00000609477 MT1LQ93083 61 aa5.09□□□□□ -1.59
HDDC2-209ENST00000609477 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
HDDC2-209ENST00000609477 H3BS24 57 aa5.05□□□□□ -1.6
HDDC2-209ENST00000609477 KRTAP12-3P60328 96 aa5.04□□□□□ -1.6
HDDC2-209ENST00000609477 MT1MQ8N339 61 aa5.03□□□□□ -1.6
HDDC2-209ENST00000609477 A0A0A0MQY5 61 aa5.02□□□□□ -1.61
HDDC2-209ENST00000609477 KRTAP23-1A1A580 65 aa5.02□□□□□ -1.61
HDDC2-209ENST00000609477 CDC42SE1Q9NRR8 79 aa4.98□□□□□ -1.61
HDDC2-209ENST00000609477 KRTAP19-4Q3LI73 84 aa4.93□□□□□ -1.62
HDDC2-209ENST00000609477 ROMO1P60602 79 aa4.9□□□□□ -1.63
HDDC2-209ENST00000609477 KRTAP4-3Q9BYR4 195 aa4.83□□□□□ -1.64
HDDC2-209ENST00000609477 LCE4AQ5TA78 99 aa4.81□□□□□ -1.64
HDDC2-209ENST00000609477 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
HDDC2-209ENST00000609477 KRTAP4-7Q9BYR0 210 aa4.78□□□□□ -1.64
HDDC2-209ENST00000609477 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
HDDC2-209ENST00000609477 KRTAP5-4Q6L8H1 288 aa4.74□□□□□ -1.65
HDDC2-209ENST00000609477 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
HDDC2-209ENST00000609477 LCE3CQ5T5A8 94 aa4.67□□□□□ -1.66
HDDC2-209ENST00000609477 MT4P47944 62 aa4.64□□□□□ -1.67
HDDC2-209ENST00000609477 GPR98Q8WXG9 6306 aa4.62□□□□□ -1.67
HDDC2-209ENST00000609477 KRTAP5-5Q701N2 237 aaPredicted RBP4.61□□□□□ -1.67
HDDC2-209ENST00000609477 HMCN1Q96RW7 5635 aa4.59□□□□□ -1.67
HDDC2-209ENST00000609477 PRO0628Q9UI54 55 aa4.59□□□□□ -1.67
HDDC2-209ENST00000609477 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
HDDC2-209ENST00000609477 KRTAP4-6Q9BYQ5 205 aa4.54□□□□□ -1.68
HDDC2-209ENST00000609477 LOC100996750A0A140TA64 210 aa4.52□□□□□ -1.69
HDDC2-209ENST00000609477 SPRR5A0A1B0GTR4 108 aa4.49□□□□□ -1.69
HDDC2-209ENST00000609477 KRTAP12-4P60329 112 aa4.49□□□□□ -1.69
HDDC2-209ENST00000609477 KRTAP20-2Q3LI61 65 aa4.43□□□□□ -1.7
HDDC2-209ENST00000609477 AHNAK2Q8IVF2 5795 aa4.42□□□□□ -1.7
HDDC2-209ENST00000609477 PMAIP1Q13794 54 aa4.39□□□□□ -1.71
HDDC2-209ENST00000609477 SYNE1Q8NF91 8797 aaKnown RBP4.36□□□□□ -1.71
HDDC2-209ENST00000609477 MT1AP04731 61 aa4.35□□□□□ -1.71
HDDC2-209ENST00000609477 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
HDDC2-209ENST00000609477 KRTAP5-10Q6L8G5 202 aa4.31□□□□□ -1.72
HDDC2-209ENST00000609477 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
HDDC2-209ENST00000609477 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
HDDC2-209ENST00000609477 KRTAP9-4Q9BYQ2 154 aa4.2□□□□□ -1.74
HDDC2-209ENST00000609477 KRTAP5-2Q701N4 177 aa4.17□□□□□ -1.74
HDDC2-209ENST00000609477 KRTAP5-7Q6L8G8 165 aa4.14□□□□□ -1.75
HDDC2-209ENST00000609477 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
HDDC2-209ENST00000609477 KTN1-AS1Q86SY8 53 aa4.08□□□□□ -1.76
HDDC2-209ENST00000609477 KRTAP6-2Q3LI66 62 aa4.06□□□□□ -1.76
HDDC2-209ENST00000609477 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
HDDC2-209ENST00000609477 MT3P25713 68 aa4□□□□□ -1.77
HDDC2-209ENST00000609477 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
HDDC2-209ENST00000609477 OBSCNQ5VST9 7968 aa3.85□□□□□ -1.79
HDDC2-209ENST00000609477 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
HDDC2-209ENST00000609477 KRTAP5-1Q6L8H4 278 aa3.7□□□□□ -1.82
HDDC2-209ENST00000609477 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
HDDC2-209ENST00000609477 KRTAP9-9Q9BYP9 154 aa3.66□□□□□ -1.82
HDDC2-209ENST00000609477 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
HDDC2-209ENST00000609477 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
HDDC2-209ENST00000609477 AHNAKQ09666 5890 aaKnown RBP3.61□□□□□ -1.83
HDDC2-209ENST00000609477 KRTAP4-12Q9BQ66 201 aa3.59□□□□□ -1.83
HDDC2-209ENST00000609477 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
HDDC2-209ENST00000609477 LCE3DQ9BYE3 92 aa3.41□□□□□ -1.86
HDDC2-209ENST00000609477 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
HDDC2-209ENST00000609477 LCE1BQ5T7P3 118 aa3.39□□□□□ -1.87
HDDC2-209ENST00000609477 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
HDDC2-209ENST00000609477 LCE3EQ5T5B0 92 aa3.24□□□□□ -1.89
HDDC2-209ENST00000609477 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.11□□□□□ -1.91
HDDC2-209ENST00000609477 KRTAP5-11Q6L8G4 156 aa3.04□□□□□ -1.92
HDDC2-209ENST00000609477 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
HDDC2-209ENST00000609477 INE1O15225 51 aa2.91□□□□□ -1.94
HDDC2-209ENST00000609477 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
HDDC2-209ENST00000609477 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
HDDC2-209ENST00000609477 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
HDDC2-209ENST00000609477 PRM1P04553 51 aa2.48□□□□□ -2.01
HDDC2-209ENST00000609477 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
HDDC2-209ENST00000609477 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
HDDC2-209ENST00000609477 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 10.2 ms