RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 MT4P47944 62 aa5.65□□□□□ -1.5
SGMS1-209ENST00000609445 A8MU10 97 aa5.64□□□□□ -1.51
SGMS1-209ENST00000609445 LCE4AQ5TA78 99 aa5.64□□□□□ -1.51
SGMS1-209ENST00000609445 KRTAP4-3Q9BYR4 195 aa5.63□□□□□ -1.51
SGMS1-209ENST00000609445 SMIM26A0A096LP01 95 aa5.62□□□□□ -1.51
SGMS1-209ENST00000609445 LCE3AQ5TA76 89 aa5.62□□□□□ -1.51
SGMS1-209ENST00000609445 AHNAK2Q8IVF2 5795 aa5.6□□□□□ -1.51
SGMS1-209ENST00000609445 A0A1B0GU69 56 aa5.6□□□□□ -1.51
SGMS1-209ENST00000609445 C10orf95Q9H7T3 257 aa5.6□□□□□ -1.51
SGMS1-209ENST00000609445 KRTAP4-11Q9BYQ6 195 aa5.57□□□□□ -1.52
SGMS1-209ENST00000609445 TNP1P09430 55 aa5.54□□□□□ -1.52
SGMS1-209ENST00000609445 KRTAP5-4Q6L8H1 288 aa5.52□□□□□ -1.53
SGMS1-209ENST00000609445 PCP4P48539 62 aa5.43□□□□□ -1.54
SGMS1-209ENST00000609445 KRTAP5-10Q6L8G5 202 aa5.42□□□□□ -1.54
SGMS1-209ENST00000609445 KRTAP12-3P60328 96 aa5.38□□□□□ -1.55
SGMS1-209ENST00000609445 ANAPC13Q9BS18 74 aa5.38□□□□□ -1.55
SGMS1-209ENST00000609445 PRR15LQ9BU68 103 aa5.35□□□□□ -1.55
SGMS1-209ENST00000609445 KRTAP5-3Q6L8H2 238 aa5.34□□□□□ -1.55
SGMS1-209ENST00000609445 CCDC179H3BU77 68 aa5.32□□□□□ -1.56
SGMS1-209ENST00000609445 LINC01558Q9Y6Z2 57 aa5.29□□□□□ -1.56
SGMS1-209ENST00000609445 KRTAP23-1A1A580 65 aa5.28□□□□□ -1.56
SGMS1-209ENST00000609445 ATP5EP56381 51 aaPredicted RBP5.25□□□□□ -1.57
SGMS1-209ENST00000609445 KRTAP5-7Q6L8G8 165 aa5.25□□□□□ -1.57
SGMS1-209ENST00000609445 KRTAP20-2Q3LI61 65 aa5.24□□□□□ -1.57
SGMS1-209ENST00000609445 KRTAP5-5Q701N2 237 aaPredicted RBP5.24□□□□□ -1.57
SGMS1-209ENST00000609445 UQCR11O14957 56 aa5.18□□□□□ -1.58
SGMS1-209ENST00000609445 SPRR5A0A1B0GTR4 108 aa5.16□□□□□ -1.58
SGMS1-209ENST00000609445 KRTAP25-1Q3LHN0 102 aa5.13□□□□□ -1.59
SGMS1-209ENST00000609445 KRTAP12-4P60329 112 aa5.12□□□□□ -1.59
SGMS1-209ENST00000609445 SYNE1Q8NF91 8797 aaKnown RBP5.1□□□□□ -1.59
SGMS1-209ENST00000609445 MIR22HGQ0VDD5 57 aa5.07□□□□□ -1.6
SGMS1-209ENST00000609445 TMEM258P61165 79 aa5.05□□□□□ -1.6
SGMS1-209ENST00000609445 A0A0A0MQY5 61 aa5.04□□□□□ -1.6
SGMS1-209ENST00000609445 K7ERS5 55 aa4.97□□□□□ -1.61
SGMS1-209ENST00000609445 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
SGMS1-209ENST00000609445 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
SGMS1-209ENST00000609445 PSPHP1O15172 72 aa4.9□□□□□ -1.63
SGMS1-209ENST00000609445 KRTAP6-1Q3LI64 71 aa4.84□□□□□ -1.63
SGMS1-209ENST00000609445 MT1AP04731 61 aa4.82□□□□□ -1.64
SGMS1-209ENST00000609445 KRTAP5-2Q701N4 177 aa4.81□□□□□ -1.64
SGMS1-209ENST00000609445 V9GYY9 64 aa4.79□□□□□ -1.64
SGMS1-209ENST00000609445 Q1T7F1 81 aa4.78□□□□□ -1.64
SGMS1-209ENST00000609445 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.66
SGMS1-209ENST00000609445 CDC42SE1Q9NRR8 79 aa4.7□□□□□ -1.66
SGMS1-209ENST00000609445 AHNAKQ09666 5890 aaKnown RBP4.69□□□□□ -1.66
SGMS1-209ENST00000609445 A6NED7 52 aa4.69□□□□□ -1.66
SGMS1-209ENST00000609445 MUC5ACP98088 5654 aa4.68□□□□□ -1.66
SGMS1-209ENST00000609445 KRTAP5-8O75690 187 aa4.67□□□□□ -1.66
SGMS1-209ENST00000609445 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.66
SGMS1-209ENST00000609445 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
SGMS1-209ENST00000609445 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
SGMS1-209ENST00000609445 ROMO1P60602 79 aa4.63□□□□□ -1.67
SGMS1-209ENST00000609445 RPS28P62857 69 aaKnown RBP4.63□□□□□ -1.67
SGMS1-209ENST00000609445 MT3P25713 68 aa4.41□□□□□ -1.7
SGMS1-209ENST00000609445 KRTAP5-1Q6L8H4 278 aa4.36□□□□□ -1.71
SGMS1-209ENST00000609445 PRAC1Q96KF2 57 aa4.2□□□□□ -1.74
SGMS1-209ENST00000609445 LCE1EQ5T753 118 aa4.07□□□□□ -1.76
SGMS1-209ENST00000609445 NDUFAF8A1L188 74 aa3.93□□□□□ -1.78
SGMS1-209ENST00000609445 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
SGMS1-209ENST00000609445 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.79
SGMS1-209ENST00000609445 BRK1Q8WUW1 75 aa3.79□□□□□ -1.8
SGMS1-209ENST00000609445 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
SGMS1-209ENST00000609445 KRTAP5-11Q6L8G4 156 aa3.73□□□□□ -1.81
SGMS1-209ENST00000609445 PMAIP1Q13794 54 aa3.52□□□□□ -1.85
SGMS1-209ENST00000609445 LCE3DQ9BYE3 92 aa3.51□□□□□ -1.85
SGMS1-209ENST00000609445 PRO0628Q9UI54 55 aa3.37□□□□□ -1.87
SGMS1-209ENST00000609445 LCE1FQ5T754 118 aa3.36□□□□□ -1.87
SGMS1-209ENST00000609445 LCE3EQ5T5B0 92 aa3.27□□□□□ -1.89
SGMS1-209ENST00000609445 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
SGMS1-209ENST00000609445 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
SGMS1-209ENST00000609445 PHGR1C9JFL3 82 aa3.16□□□□□ -1.9
SGMS1-209ENST00000609445 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
SGMS1-209ENST00000609445 KTN1-AS1Q86SY8 53 aa3.1□□□□□ -1.91
SGMS1-209ENST00000609445 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
SGMS1-209ENST00000609445 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
SGMS1-209ENST00000609445 PRM1P04553 51 aa2.37□□□□□ -2.03
SGMS1-209ENST00000609445 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
SGMS1-209ENST00000609445 INE1O15225 51 aa2.05□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms