RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 KRTAP5-11Q6L8G4 156 aa1.78□□□□□ -2.12
HDDC2-208ENST00000609021 KRTAP2-2Q9BYT5 123 aa1.77□□□□□ -2.13
HDDC2-208ENST00000609021 KRTAP12-3P60328 96 aa1.75□□□□□ -2.13
HDDC2-208ENST00000609021 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
HDDC2-208ENST00000609021 KRTAP8-1Q8IUC2 63 aa1.74□□□□□ -2.13
HDDC2-208ENST00000609021 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
HDDC2-208ENST00000609021 KRTAP5-2Q701N4 177 aa1.73□□□□□ -2.13
HDDC2-208ENST00000609021 CRCT1Q9UGL9 99 aa1.73□□□□□ -2.13
HDDC2-208ENST00000609021 LCE1AQ5T7P2 110 aa1.71□□□□□ -2.14
HDDC2-208ENST00000609021 KRTAP10-12P60413 245 aa1.7□□□□□ -2.14
HDDC2-208ENST00000609021 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
HDDC2-208ENST00000609021 KRTAP5-1Q6L8H4 278 aa1.7□□□□□ -2.14
HDDC2-208ENST00000609021 KRTAP10-7P60409 375 aaPredicted RBP1.69□□□□□ -2.14
HDDC2-208ENST00000609021 SSPOA2VEC9 5147 aa1.69□□□□□ -2.14
HDDC2-208ENST00000609021 OBSCNQ5VST9 7968 aa1.68□□□□□ -2.14
HDDC2-208ENST00000609021 MT1HP80294 61 aa1.67□□□□□ -2.14
HDDC2-208ENST00000609021 LCE1EQ5T753 118 aa1.67□□□□□ -2.14
HDDC2-208ENST00000609021 KRTAP5-5Q701N2 237 aaPredicted RBP1.67□□□□□ -2.14
HDDC2-208ENST00000609021 KRTAP4-3Q9BYR4 195 aa1.67□□□□□ -2.14
HDDC2-208ENST00000609021 USH2AO75445 5202 aa1.66□□□□□ -2.14
HDDC2-208ENST00000609021 KRTAP6-3Q3LI67 103 aa1.65□□□□□ -2.15
HDDC2-208ENST00000609021 KRTAP2-3P0C7H8 128 aa1.63□□□□□ -2.15
HDDC2-208ENST00000609021 KRTAP2-4Q9BYR9 128 aa1.63□□□□□ -2.15
HDDC2-208ENST00000609021 KRTAP2-1Q9BYU5 128 aa1.63□□□□□ -2.15
HDDC2-208ENST00000609021 KRTAP10-5P60370 271 aa1.63□□□□□ -2.15
HDDC2-208ENST00000609021 LCE3CQ5T5A8 94 aa1.63□□□□□ -2.15
HDDC2-208ENST00000609021 LCE1FQ5T754 118 aa1.61□□□□□ -2.15
HDDC2-208ENST00000609021 MT1FP04733 61 aa1.61□□□□□ -2.15
HDDC2-208ENST00000609021 MT2AP02795 61 aa1.6□□□□□ -2.15
HDDC2-208ENST00000609021 MT3P25713 68 aa1.58□□□□□ -2.16
HDDC2-208ENST00000609021 SPRR2GQ9BYE4 73 aa1.58□□□□□ -2.16
HDDC2-208ENST00000609021 MT1BP07438 61 aa1.56□□□□□ -2.16
HDDC2-208ENST00000609021 KRTAP19-8Q3LI54 63 aa1.56□□□□□ -2.16
HDDC2-208ENST00000609021 PRM1P04553 51 aa1.53□□□□□ -2.16
HDDC2-208ENST00000609021 KMT2DO14686 5537 aa1.52□□□□□ -2.17
HDDC2-208ENST00000609021 DSTQ03001 7570 aaKnown RBP1.52□□□□□ -2.17
HDDC2-208ENST00000609021 AHNAK2Q8IVF2 5795 aa1.51□□□□□ -2.17
HDDC2-208ENST00000609021 SYNE1Q8NF91 8797 aaKnown RBP1.51□□□□□ -2.17
HDDC2-208ENST00000609021 MT1XP80297 61 aa1.5□□□□□ -2.17
HDDC2-208ENST00000609021 AHNAKQ09666 5890 aaKnown RBP1.5□□□□□ -2.17
HDDC2-208ENST00000609021 KRTAP9-6A8MVA2 160 aa1.48□□□□□ -2.17
HDDC2-208ENST00000609021 KRTAP20-1Q3LI63 56 aa1.48□□□□□ -2.17
HDDC2-208ENST00000609021 FCGBPQ9Y6R7 5405 aaPredicted RBP1.47□□□□□ -2.17
HDDC2-208ENST00000609021 LCE3EQ5T5B0 92 aa1.46□□□□□ -2.17
HDDC2-208ENST00000609021 KRTAP19-5Q3LI72 72 aa1.46□□□□□ -2.18
HDDC2-208ENST00000609021 SYNE2Q8WXH0 6885 aaKnown RBP1.45□□□□□ -2.18
HDDC2-208ENST00000609021 KRTAP19-6Q3LI70 58 aa1.44□□□□□ -2.18
HDDC2-208ENST00000609021 MACF1Q9UPN3 7388 aaKnown RBP1.43□□□□□ -2.18
HDDC2-208ENST00000609021 LCE3DQ9BYE3 92 aa1.43□□□□□ -2.18
HDDC2-208ENST00000609021 NEBP20929 6669 aa1.42□□□□□ -2.18
HDDC2-208ENST00000609021 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
HDDC2-208ENST00000609021 KRTAP19-7Q3SYF9 63 aa1.37□□□□□ -2.19
HDDC2-208ENST00000609021 MUC12Q9UKN1 5478 aa1.35□□□□□ -2.19
HDDC2-208ENST00000609021 MUC5ACP98088 5654 aa1.33□□□□□ -2.2
HDDC2-208ENST00000609021 SPRR2FQ96RM1 72 aa1.33□□□□□ -2.2
HDDC2-208ENST00000609021 MDN1Q9NU22 5596 aa1.33□□□□□ -2.2
HDDC2-208ENST00000609021 MT1AP04731 61 aa1.29□□□□□ -2.2
HDDC2-208ENST00000609021 KRTAP6-2Q3LI66 62 aa1.29□□□□□ -2.2
HDDC2-208ENST00000609021 MT1EP04732 61 aa1.29□□□□□ -2.2
HDDC2-208ENST00000609021 SPRR2EP22531 72 aa1.28□□□□□ -2.2
HDDC2-208ENST00000609021 SPRR2BP35325 72 aa1.28□□□□□ -2.2
HDDC2-208ENST00000609021 SPRR2AP35326 72 aa1.28□□□□□ -2.2
HDDC2-208ENST00000609021 MT1LQ93083 61 aa1.28□□□□□ -2.21
HDDC2-208ENST00000609021 MT1GP13640 62 aa1.26□□□□□ -2.21
HDDC2-208ENST00000609021 SPRR2DP22532 72 aa1.23□□□□□ -2.21
HDDC2-208ENST00000609021 KRTAP5-7Q6L8G8 165 aa1.21□□□□□ -2.22
HDDC2-208ENST00000609021 MT1MQ8N339 61 aa1.19□□□□□ -2.22
HDDC2-208ENST00000609021 KRTAP19-3Q7Z4W3 81 aa1.18□□□□□ -2.22
HDDC2-208ENST00000609021 MT4P47944 62 aa1.17□□□□□ -2.22
HDDC2-208ENST00000609021 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
HDDC2-208ENST00000609021 LCE1CQ5T751 118 aa1.1□□□□□ -2.23
HDDC2-208ENST00000609021 LCE1BQ5T7P3 118 aa1.1□□□□□ -2.23
HDDC2-208ENST00000609021 KRTAP6-1Q3LI64 71 aa1.07□□□□□ -2.24
HDDC2-208ENST00000609021 KRTAP20-2Q3LI61 65 aa0.98□□□□□ -2.25
HDDC2-208ENST00000609021 KRTAP21-1Q3LI58 79 aa0.93□□□□□ -2.26
HDDC2-208ENST00000609021 KRTAP21-2Q3LI59 83 aa0.78□□□□□ -2.28
HDDC2-208ENST00000609021 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
HDDC2-208ENST00000609021 PHGR1C9JFL3 82 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms