RNA–Protein interactions for RNA: ENST00000608426.1

LINC00343-211, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 709 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-211ENST00000608426 KIAA1109Q2LD37 5005 aa0.73□□□□□ -2.29
LINC00343-211ENST00000608426 MUC2Q02817 5179 aa0.73□□□□□ -2.29
LINC00343-211ENST00000608426 GOLGB1Q14789 3259 aaKnown RBP0.73□□□□□ -2.29
LINC00343-211ENST00000608426 IGSF10Q6WRI0 2623 aa0.72□□□□□ -2.29
LINC00343-211ENST00000608426 MUC17Q685J3 4493 aa0.72□□□□□ -2.29
LINC00343-211ENST00000608426 ASPMQ8IZT6 3477 aa0.72□□□□□ -2.29
LINC00343-211ENST00000608426 DOPEY1Q5JWR5 2465 aa0.72□□□□□ -2.29
LINC00343-211ENST00000608426 VCANP13611 3396 aa0.71□□□□□ -2.3
LINC00343-211ENST00000608426 FASNP49327 2511 aaKnown RBP0.71□□□□□ -2.3
LINC00343-211ENST00000608426 FSIP2Q5CZC0 6907 aa0.71□□□□□ -2.3
LINC00343-211ENST00000608426 MYO9AB2RTY4 2548 aa0.7□□□□□ -2.3
LINC00343-211ENST00000608426 NBEAL1Q6ZS30 2694 aa0.7□□□□□ -2.3
LINC00343-211ENST00000608426 SPRR2FQ96RM1 72 aa0.7□□□□□ -2.3
LINC00343-211ENST00000608426 MACF1Q9UPN3 7388 aaKnown RBP0.69□□□□□ -2.3
LINC00343-211ENST00000608426 NEBP20929 6669 aa0.69□□□□□ -2.3
LINC00343-211ENST00000608426 SPRR2EP22531 72 aa0.69□□□□□ -2.3
LINC00343-211ENST00000608426 SYNE2Q8WXH0 6885 aaKnown RBP0.69□□□□□ -2.3
LINC00343-211ENST00000608426 RYR1P21817 5038 aa0.68□□□□□ -2.3
LINC00343-211ENST00000608426 CENPEQ02224 2701 aa0.68□□□□□ -2.3
LINC00343-211ENST00000608426 MYO15AQ9UKN7 3530 aa0.68□□□□□ -2.3
LINC00343-211ENST00000608426 DNHD1Q96M86 4753 aa0.66□□□□□ -2.3
LINC00343-211ENST00000608426 DEFB4AO15263 64 aa0.66□□□□□ -2.3
LINC00343-211ENST00000608426 CEP295Q9C0D2 2601 aa0.66□□□□□ -2.3
LINC00343-211ENST00000608426 EYSQ5T1H1 3165 aa0.65□□□□□ -2.3
LINC00343-211ENST00000608426 MGAM2Q2M2H8 2515 aa0.65□□□□□ -2.31
LINC00343-211ENST00000608426 HERC1Q15751 4861 aa0.64□□□□□ -2.31
LINC00343-211ENST00000608426 EP400Q96L91 3159 aa0.63□□□□□ -2.31
LINC00343-211ENST00000608426 TLN1Q9Y490 2541 aaKnown RBP0.63□□□□□ -2.31
LINC00343-211ENST00000608426 UNC80Q8N2C7 3258 aa0.63□□□□□ -2.31
LINC00343-211ENST00000608426 STARD9Q9P2P6 4700 aa0.63□□□□□ -2.31
LINC00343-211ENST00000608426 AHNAKQ09666 5890 aaKnown RBP0.63□□□□□ -2.31
LINC00343-211ENST00000608426 RYR3Q15413 4870 aa0.62□□□□□ -2.31
LINC00343-211ENST00000608426 EPPK1P58107 5090 aaKnown RBP0.62□□□□□ -2.31
LINC00343-211ENST00000608426 HYDINQ4G0P3 5121 aa0.62□□□□□ -2.31
LINC00343-211ENST00000608426 HMCN2Q8NDA2 5059 aa0.62□□□□□ -2.31
LINC00343-211ENST00000608426 SPTAN1Q13813 2472 aaKnown RBP0.61□□□□□ -2.31
LINC00343-211ENST00000608426 BIRC6Q9NR09 4857 aa0.61□□□□□ -2.31
LINC00343-211ENST00000608426 MT1EP04732 61 aa0.61□□□□□ -2.31
LINC00343-211ENST00000608426 KRTAP20-1Q3LI63 56 aa0.61□□□□□ -2.31
LINC00343-211ENST00000608426 RYR2Q92736 4967 aa0.61□□□□□ -2.31
LINC00343-211ENST00000608426 CENPFP49454 3210 aa0.6□□□□□ -2.31
LINC00343-211ENST00000608426 ABCA13Q86UQ4 5058 aa0.6□□□□□ -2.31
LINC00343-211ENST00000608426 KMT2CQ8NEZ4 4911 aaKnown RBP0.59□□□□□ -2.31
LINC00343-211ENST00000608426 LRP2P98164 4655 aa0.59□□□□□ -2.31
LINC00343-211ENST00000608426 STAB2Q8WWQ8 2551 aa0.58□□□□□ -2.32
LINC00343-211ENST00000608426 DSTQ03001 7570 aaKnown RBP0.58□□□□□ -2.32
LINC00343-211ENST00000608426 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
LINC00343-211ENST00000608426 WDFY3Q8IZQ1 3526 aa0.58□□□□□ -2.32
LINC00343-211ENST00000608426 BRCA2P51587 3418 aa0.58□□□□□ -2.32
LINC00343-211ENST00000608426 MT1HP80294 61 aa0.57□□□□□ -2.32
LINC00343-211ENST00000608426 MT1LQ93083 61 aa0.57□□□□□ -2.32
LINC00343-211ENST00000608426 SSPOA2VEC9 5147 aa0.57□□□□□ -2.32
LINC00343-211ENST00000608426 CDH23Q9H251 3354 aa0.55□□□□□ -2.32
LINC00343-211ENST00000608426 MUC5BQ9HC84 5762 aaPredicted RBP0.54□□□□□ -2.32
LINC00343-211ENST00000608426 MDN1Q9NU22 5596 aa0.54□□□□□ -2.32
LINC00343-211ENST00000608426 FAT4Q6V0I7 4981 aa0.53□□□□□ -2.32
LINC00343-211ENST00000608426 SPRR2GQ9BYE4 73 aa0.53□□□□□ -2.32
LINC00343-211ENST00000608426 HERC2O95714 4834 aa0.52□□□□□ -2.33
LINC00343-211ENST00000608426 RNF213Q63HN8 5207 aa0.52□□□□□ -2.33
LINC00343-211ENST00000608426 DNAH14Q0VDD8 3507 aa0.51□□□□□ -2.33
LINC00343-211ENST00000608426 KMT2DO14686 5537 aa0.5□□□□□ -2.33
LINC00343-211ENST00000608426 USH2AO75445 5202 aa0.5□□□□□ -2.33
LINC00343-211ENST00000608426 MT1XP80297 61 aa0.47□□□□□ -2.33
LINC00343-211ENST00000608426 MUC5ACP98088 5654 aa0.47□□□□□ -2.33
LINC00343-211ENST00000608426 MT1GP13640 62 aa0.41□□□□□ -2.34
LINC00343-211ENST00000608426 KRTAP19-8Q3LI54 63 aa0.41□□□□□ -2.34
LINC00343-211ENST00000608426 KRTAP19-7Q3SYF9 63 aa0.39□□□□□ -2.35
LINC00343-211ENST00000608426 MUC12Q9UKN1 5478 aa0.36□□□□□ -2.35
LINC00343-211ENST00000608426 KRTAP6-1Q3LI64 71 aa0.35□□□□□ -2.35
LINC00343-211ENST00000608426 MT2AP02795 61 aa0.33□□□□□ -2.36
LINC00343-211ENST00000608426 KRTAP19-6Q3LI70 58 aa0.33□□□□□ -2.36
LINC00343-211ENST00000608426 MT1MQ8N339 61 aa0.32□□□□□ -2.36
LINC00343-211ENST00000608426 MT4P47944 62 aa0.31□□□□□ -2.36
LINC00343-211ENST00000608426 MT1BP07438 61 aa0.29□□□□□ -2.36
LINC00343-211ENST00000608426 KRTAP19-2Q3LHN2 52 aa0.29□□□□□ -2.36
LINC00343-211ENST00000608426 MT1HL1P0DM35 61 aa0.25□□□□□ -2.37
LINC00343-211ENST00000608426 MT1FP04733 61 aa0.17□□□□□ -2.38
LINC00343-211ENST00000608426 KRTAP20-2Q3LI61 65 aa0.15□□□□□ -2.39
Retrieved 78 of 20,778 RNA–protein pairs in 58.8 ms