RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 C10orf95Q9H7T3 257 aa7.04□□□□□ -1.28
SGMS1-208ENST00000608287 KRTAP19-5Q3LI72 72 aa7.02□□□□□ -1.29
SGMS1-208ENST00000608287 TNP1P09430 55 aa7.01□□□□□ -1.29
SGMS1-208ENST00000608287 PP632Q6XCG6 107 aa7□□□□□ -1.29
SGMS1-208ENST00000608287 MT1GP13640 62 aa6.95□□□□□ -1.3
SGMS1-208ENST00000608287 LCE3AQ5TA76 89 aa6.93□□□□□ -1.3
SGMS1-208ENST00000608287 MIR22HGQ0VDD5 57 aa6.9□□□□□ -1.3
SGMS1-208ENST00000608287 KRTAP5-4Q6L8H1 288 aa6.89□□□□□ -1.31
SGMS1-208ENST00000608287 KRTAP5-3Q6L8H2 238 aa6.88□□□□□ -1.31
SGMS1-208ENST00000608287 V9GYY9 64 aa6.87□□□□□ -1.31
SGMS1-208ENST00000608287 PSPHP1O15172 72 aa6.84□□□□□ -1.31
SGMS1-208ENST00000608287 KRTAP4-6Q9BYQ5 205 aa6.84□□□□□ -1.31
SGMS1-208ENST00000608287 SPRR5A0A1B0GTR4 108 aa6.82□□□□□ -1.32
SGMS1-208ENST00000608287 Q1T7F1 81 aa6.81□□□□□ -1.32
SGMS1-208ENST00000608287 MT1LQ93083 61 aa6.8□□□□□ -1.32
SGMS1-208ENST00000608287 PCP4P48539 62 aa6.78□□□□□ -1.32
SGMS1-208ENST00000608287 K7ERS5 55 aa6.77□□□□□ -1.33
SGMS1-208ENST00000608287 MT1MQ8N339 61 aa6.75□□□□□ -1.33
SGMS1-208ENST00000608287 KRTAP25-1Q3LHN0 102 aa6.67□□□□□ -1.34
SGMS1-208ENST00000608287 KRTAP12-3P60328 96 aa6.66□□□□□ -1.34
SGMS1-208ENST00000608287 A6NED7 52 aa6.62□□□□□ -1.35
SGMS1-208ENST00000608287 KRTAP4-3Q9BYR4 195 aa6.6□□□□□ -1.35
SGMS1-208ENST00000608287 KRTAP20-2Q3LI61 65 aa6.55□□□□□ -1.36
SGMS1-208ENST00000608287 RPS28P62857 69 aaKnown RBP6.53□□□□□ -1.36
SGMS1-208ENST00000608287 KRTAP4-7Q9BYR0 210 aa6.49□□□□□ -1.37
SGMS1-208ENST00000608287 KRTAP12-4P60329 112 aa6.41□□□□□ -1.38
SGMS1-208ENST00000608287 CDC42SE1Q9NRR8 79 aa6.41□□□□□ -1.38
SGMS1-208ENST00000608287 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.38
SGMS1-208ENST00000608287 ROMO1P60602 79 aa6.31□□□□□ -1.4
SGMS1-208ENST00000608287 KRTAP19-4Q3LI73 84 aa6.26□□□□□ -1.41
SGMS1-208ENST00000608287 KRTAP15-1Q3LI76 137 aa6.26□□□□□ -1.41
SGMS1-208ENST00000608287 KRTAP5-5Q701N2 237 aaPredicted RBP6.25□□□□□ -1.41
SGMS1-208ENST00000608287 KRTAP4-11Q9BYQ6 195 aa6.19□□□□□ -1.42
SGMS1-208ENST00000608287 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
SGMS1-208ENST00000608287 LCE3CQ5T5A8 94 aa6.14□□□□□ -1.43
SGMS1-208ENST00000608287 AHNAKQ09666 5890 aaKnown RBP6.14□□□□□ -1.43
SGMS1-208ENST00000608287 MUC5ACP98088 5654 aa6.07□□□□□ -1.44
SGMS1-208ENST00000608287 SYNE1Q8NF91 8797 aaKnown RBP6.03□□□□□ -1.44
SGMS1-208ENST00000608287 MUC5BQ9HC84 5762 aaPredicted RBP6.02□□□□□ -1.45
SGMS1-208ENST00000608287 KRTAP5-8O75690 187 aa5.98□□□□□ -1.45
SGMS1-208ENST00000608287 KRTAP5-2Q701N4 177 aa5.89□□□□□ -1.47
SGMS1-208ENST00000608287 KRTAP9-9Q9BYP9 154 aa5.88□□□□□ -1.47
SGMS1-208ENST00000608287 BRK1Q8WUW1 75 aa5.8□□□□□ -1.48
SGMS1-208ENST00000608287 KRTAP9-6A8MVA2 160 aa5.78□□□□□ -1.48
SGMS1-208ENST00000608287 MT1AP04731 61 aa5.78□□□□□ -1.48
SGMS1-208ENST00000608287 KRTAP6-1Q3LI64 71 aa5.75□□□□□ -1.49
SGMS1-208ENST00000608287 OBSCNQ5VST9 7968 aa5.66□□□□□ -1.5
SGMS1-208ENST00000608287 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
SGMS1-208ENST00000608287 KRTAP6-2Q3LI66 62 aa5.5□□□□□ -1.53
SGMS1-208ENST00000608287 PRO0628Q9UI54 55 aa5.45□□□□□ -1.54
SGMS1-208ENST00000608287 PMAIP1Q13794 54 aa5.44□□□□□ -1.54
SGMS1-208ENST00000608287 KRTAP5-1Q6L8H4 278 aa5.41□□□□□ -1.54
SGMS1-208ENST00000608287 KRTAP4-12Q9BQ66 201 aa5.32□□□□□ -1.56
SGMS1-208ENST00000608287 SVIPQ8NHG7 77 aa5.3□□□□□ -1.56
SGMS1-208ENST00000608287 MT3P25713 68 aa5.29□□□□□ -1.56
SGMS1-208ENST00000608287 PRAC1Q96KF2 57 aa5.23□□□□□ -1.57
SGMS1-208ENST00000608287 KTN1-AS1Q86SY8 53 aa5.04□□□□□ -1.6
SGMS1-208ENST00000608287 LCE1EQ5T753 118 aa5□□□□□ -1.61
SGMS1-208ENST00000608287 H3BS24 57 aa4.88□□□□□ -1.63
SGMS1-208ENST00000608287 LCE1BQ5T7P3 118 aa4.7□□□□□ -1.66
SGMS1-208ENST00000608287 KRTAP4-2Q9BYR5 136 aa4.7□□□□□ -1.66
SGMS1-208ENST00000608287 LCE1CQ5T751 118 aa4.62□□□□□ -1.67
SGMS1-208ENST00000608287 LCE3DQ9BYE3 92 aa4.46□□□□□ -1.7
SGMS1-208ENST00000608287 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
SGMS1-208ENST00000608287 LCE1FQ5T754 118 aa4.37□□□□□ -1.71
SGMS1-208ENST00000608287 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
SGMS1-208ENST00000608287 PHGR1C9JFL3 82 aa4.27□□□□□ -1.73
SGMS1-208ENST00000608287 LCE3EQ5T5B0 92 aa4.21□□□□□ -1.74
SGMS1-208ENST00000608287 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
SGMS1-208ENST00000608287 NDUFAF8A1L188 74 aa3.92□□□□□ -1.78
SGMS1-208ENST00000608287 KRTAP21-2Q3LI59 83 aa3.77□□□□□ -1.81
SGMS1-208ENST00000608287 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
SGMS1-208ENST00000608287 A0A0A0MQY5 61 aa3.49□□□□□ -1.85
SGMS1-208ENST00000608287 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
SGMS1-208ENST00000608287 KRTAP21-1Q3LI58 79 aa3.3□□□□□ -1.88
SGMS1-208ENST00000608287 INE1O15225 51 aa3.26□□□□□ -1.89
SGMS1-208ENST00000608287 PRM1P04553 51 aa3.24□□□□□ -1.89
SGMS1-208ENST00000608287 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 100.4 ms