RNA–Protein interactions for RNA: ENST00000607320.5

RFTN1-212, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 3

Gene RFTN1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-212ENST00000607320 KRTAP19-7Q3SYF9 63 aa4□□□□□ -1.77
RFTN1-212ENST00000607320 COA5Q86WW8 74 aa3.99□□□□□ -1.77
RFTN1-212ENST00000607320 MT1EP04732 61 aa3.98□□□□□ -1.77
RFTN1-212ENST00000607320 KRTAP19-3Q7Z4W3 81 aa3.98□□□□□ -1.77
RFTN1-212ENST00000607320 DSTQ03001 7570 aaKnown RBP3.98□□□□□ -1.77
RFTN1-212ENST00000607320 A0A0D9SG42 100 aa3.97□□□□□ -1.77
RFTN1-212ENST00000607320 K7ERS5 55 aa3.94□□□□□ -1.78
RFTN1-212ENST00000607320 SPINT4Q6UDR6 99 aa3.94□□□□□ -1.78
RFTN1-212ENST00000607320 A0A1B0GU33 70 aa3.93□□□□□ -1.78
RFTN1-212ENST00000607320 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
RFTN1-212ENST00000607320 CYSTM1Q9H1C7 97 aa3.9□□□□□ -1.79
RFTN1-212ENST00000607320 MT1GP13640 62 aa3.88□□□□□ -1.79
RFTN1-212ENST00000607320 KRTAP12-1P59990 96 aa3.88□□□□□ -1.79
RFTN1-212ENST00000607320 KRTAP19-5Q3LI72 72 aa3.88□□□□□ -1.79
RFTN1-212ENST00000607320 PP632Q6XCG6 107 aa3.88□□□□□ -1.79
RFTN1-212ENST00000607320 COX7CP15954 63 aa3.86□□□□□ -1.79
RFTN1-212ENST00000607320 LCE1EQ5T753 118 aa3.83□□□□□ -1.8
RFTN1-212ENST00000607320 H7BZZ5 65 aa3.82□□□□□ -1.8
RFTN1-212ENST00000607320 GPR98Q8WXG9 6306 aa3.82□□□□□ -1.8
RFTN1-212ENST00000607320 A0A1B0GU69 56 aa3.81□□□□□ -1.8
RFTN1-212ENST00000607320 RPS28P62857 69 aaKnown RBP3.81□□□□□ -1.8
RFTN1-212ENST00000607320 MT1MQ8N339 61 aa3.8□□□□□ -1.8
RFTN1-212ENST00000607320 A6NED7 52 aa3.78□□□□□ -1.8
RFTN1-212ENST00000607320 MT1LQ93083 61 aa3.78□□□□□ -1.8
RFTN1-212ENST00000607320 TNP1P09430 55 aa3.77□□□□□ -1.81
RFTN1-212ENST00000607320 LCE3EQ5T5B0 92 aa3.77□□□□□ -1.81
RFTN1-212ENST00000607320 MT4P47944 62 aa3.75□□□□□ -1.81
RFTN1-212ENST00000607320 C10orf95Q9H7T3 257 aa3.75□□□□□ -1.81
RFTN1-212ENST00000607320 LCE3AQ5TA76 89 aa3.74□□□□□ -1.81
RFTN1-212ENST00000607320 HMCN1Q96RW7 5635 aa3.72□□□□□ -1.81
RFTN1-212ENST00000607320 PRR15LQ9BU68 103 aa3.69□□□□□ -1.82
RFTN1-212ENST00000607320 KRTAP5-4Q6L8H1 288 aa3.68□□□□□ -1.82
RFTN1-212ENST00000607320 KTN1-AS1Q86SY8 53 aa3.68□□□□□ -1.82
RFTN1-212ENST00000607320 KRTAP4-3Q9BYR4 195 aa3.68□□□□□ -1.82
RFTN1-212ENST00000607320 KRTAP25-1Q3LHN0 102 aa3.65□□□□□ -1.83
RFTN1-212ENST00000607320 ATP5EP56381 51 aaPredicted RBP3.62□□□□□ -1.83
RFTN1-212ENST00000607320 AHNAK2Q8IVF2 5795 aa3.62□□□□□ -1.83
RFTN1-212ENST00000607320 KRTAP12-3P60328 96 aa3.61□□□□□ -1.83
RFTN1-212ENST00000607320 LINC01558Q9Y6Z2 57 aa3.59□□□□□ -1.83
RFTN1-212ENST00000607320 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
RFTN1-212ENST00000607320 KRTAP5-10Q6L8G5 202 aa3.58□□□□□ -1.84
RFTN1-212ENST00000607320 CCDC179H3BU77 68 aa3.56□□□□□ -1.84
RFTN1-212ENST00000607320 UQCR11O14957 56 aa3.55□□□□□ -1.84
RFTN1-212ENST00000607320 BRK1Q8WUW1 75 aa3.54□□□□□ -1.84
RFTN1-212ENST00000607320 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
RFTN1-212ENST00000607320 KRTAP20-2Q3LI61 65 aa3.49□□□□□ -1.85
RFTN1-212ENST00000607320 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
RFTN1-212ENST00000607320 KRTAP5-7Q6L8G8 165 aa3.47□□□□□ -1.85
RFTN1-212ENST00000607320 KRTAP12-4P60329 112 aa3.46□□□□□ -1.86
RFTN1-212ENST00000607320 TMEM258P61165 79 aa3.46□□□□□ -1.86
RFTN1-212ENST00000607320 MIR22HGQ0VDD5 57 aa3.44□□□□□ -1.86
RFTN1-212ENST00000607320 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
RFTN1-212ENST00000607320 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
RFTN1-212ENST00000607320 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
RFTN1-212ENST00000607320 ROMO1P60602 79 aa3.26□□□□□ -1.89
RFTN1-212ENST00000607320 Q1T7F1 81 aa3.26□□□□□ -1.89
RFTN1-212ENST00000607320 MT1AP04731 61 aa3.23□□□□□ -1.89
RFTN1-212ENST00000607320 CDC42SE1Q9NRR8 79 aa3.22□□□□□ -1.89
RFTN1-212ENST00000607320 KRTAP6-1Q3LI64 71 aa3.2□□□□□ -1.9
RFTN1-212ENST00000607320 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
RFTN1-212ENST00000607320 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
RFTN1-212ENST00000607320 KRTAP6-2Q3LI66 62 aa3.08□□□□□ -1.92
RFTN1-212ENST00000607320 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
RFTN1-212ENST00000607320 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
RFTN1-212ENST00000607320 MUC5BQ9HC84 5762 aaPredicted RBP3□□□□□ -1.93
RFTN1-212ENST00000607320 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
RFTN1-212ENST00000607320 AHNAKQ09666 5890 aaKnown RBP2.96□□□□□ -1.93
RFTN1-212ENST00000607320 KRTAP5-1Q6L8H4 278 aa2.89□□□□□ -1.95
RFTN1-212ENST00000607320 INE1O15225 51 aa2.69□□□□□ -1.98
RFTN1-212ENST00000607320 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
RFTN1-212ENST00000607320 LCE1BQ5T7P3 118 aa2.59□□□□□ -1.99
RFTN1-212ENST00000607320 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
RFTN1-212ENST00000607320 PHGR1C9JFL3 82 aa2.1□□□□□ -2.07
RFTN1-212ENST00000607320 KRTAP21-2Q3LI59 83 aa2.1□□□□□ -2.07
RFTN1-212ENST00000607320 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
RFTN1-212ENST00000607320 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
RFTN1-212ENST00000607320 PRM1P04553 51 aa1.59□□□□□ -2.15
RFTN1-212ENST00000607320 MUC16Q8WXI7 14507 aa1.35□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 44.8 ms