RNA–Protein interactions for RNA: ENST00000607100.5

LINC00954-204, long intergenic non-protein coding RNA 954, humanhuman

TSL 2

Gene LINC00954, Length 2,239 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-204ENST00000607100 KRTAP10-5P60370 271 aa4.37□□□□□ -1.71
LINC00954-204ENST00000607100 MT1XP80297 61 aa4.36□□□□□ -1.71
LINC00954-204ENST00000607100 SPRR5A0A1B0GTR4 108 aa4.3□□□□□ -1.72
LINC00954-204ENST00000607100 KRTAP8-1Q8IUC2 63 aa4.26□□□□□ -1.73
LINC00954-204ENST00000607100 KRTAP10-7P60409 375 aaPredicted RBP4.23□□□□□ -1.73
LINC00954-204ENST00000607100 KRTAP10-12P60413 245 aa4.21□□□□□ -1.74
LINC00954-204ENST00000607100 INE1O15225 51 aa4.16□□□□□ -1.74
LINC00954-204ENST00000607100 USH2AO75445 5202 aa4.16□□□□□ -1.74
LINC00954-204ENST00000607100 KRTAP12-3P60328 96 aa4.15□□□□□ -1.74
LINC00954-204ENST00000607100 KMT2DO14686 5537 aa4.07□□□□□ -1.76
LINC00954-204ENST00000607100 KRTAP2-2Q9BYT5 123 aa4.04□□□□□ -1.76
LINC00954-204ENST00000607100 MT3P25713 68 aa4.03□□□□□ -1.76
LINC00954-204ENST00000607100 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
LINC00954-204ENST00000607100 SSPOA2VEC9 5147 aa3.93□□□□□ -1.78
LINC00954-204ENST00000607100 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
LINC00954-204ENST00000607100 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
LINC00954-204ENST00000607100 FSIP2Q5CZC0 6907 aa3.86□□□□□ -1.79
LINC00954-204ENST00000607100 KRTAP9-6A8MVA2 160 aa3.81□□□□□ -1.8
LINC00954-204ENST00000607100 KRTAP20-1Q3LI63 56 aa3.8□□□□□ -1.8
LINC00954-204ENST00000607100 KRTAP19-6Q3LI70 58 aa3.78□□□□□ -1.8
LINC00954-204ENST00000607100 MT1EP04732 61 aa3.76□□□□□ -1.81
LINC00954-204ENST00000607100 MT1LQ93083 61 aa3.75□□□□□ -1.81
LINC00954-204ENST00000607100 NEBP20929 6669 aa3.71□□□□□ -1.82
LINC00954-204ENST00000607100 KRTAP6-3Q3LI67 103 aa3.68□□□□□ -1.82
LINC00954-204ENST00000607100 GPR98Q8WXG9 6306 aa3.68□□□□□ -1.82
LINC00954-204ENST00000607100 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
LINC00954-204ENST00000607100 FCGBPQ9Y6R7 5405 aaPredicted RBP3.64□□□□□ -1.83
LINC00954-204ENST00000607100 KRTAP2-3P0C7H8 128 aa3.61□□□□□ -1.83
LINC00954-204ENST00000607100 KRTAP2-4Q9BYR9 128 aa3.61□□□□□ -1.83
LINC00954-204ENST00000607100 KRTAP2-1Q9BYU5 128 aa3.61□□□□□ -1.83
LINC00954-204ENST00000607100 MUC12Q9UKN1 5478 aa3.59□□□□□ -1.83
LINC00954-204ENST00000607100 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.84
LINC00954-204ENST00000607100 KRTAP5-11Q6L8G4 156 aa3.58□□□□□ -1.84
LINC00954-204ENST00000607100 SYNE2Q8WXH0 6885 aaKnown RBP3.56□□□□□ -1.84
LINC00954-204ENST00000607100 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
LINC00954-204ENST00000607100 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.84
LINC00954-204ENST00000607100 MT1MQ8N339 61 aa3.52□□□□□ -1.85
LINC00954-204ENST00000607100 MT1GP13640 62 aa3.51□□□□□ -1.85
LINC00954-204ENST00000607100 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
LINC00954-204ENST00000607100 MACF1Q9UPN3 7388 aaKnown RBP3.45□□□□□ -1.86
LINC00954-204ENST00000607100 SPRR2FQ96RM1 72 aa3.44□□□□□ -1.86
LINC00954-204ENST00000607100 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
LINC00954-204ENST00000607100 MUC5BQ9HC84 5762 aaPredicted RBP3.36□□□□□ -1.87
LINC00954-204ENST00000607100 MDN1Q9NU22 5596 aa3.28□□□□□ -1.88
LINC00954-204ENST00000607100 KRTAP5-9P26371 169 aa3.24□□□□□ -1.89
LINC00954-204ENST00000607100 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
LINC00954-204ENST00000607100 KRTAP6-1Q3LI64 71 aa3.2□□□□□ -1.9
LINC00954-204ENST00000607100 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
LINC00954-204ENST00000607100 MT1AP04731 61 aa3.14□□□□□ -1.91
LINC00954-204ENST00000607100 SPRR2EP22531 72 aa3.14□□□□□ -1.91
LINC00954-204ENST00000607100 SPRR2BP35325 72 aa3.14□□□□□ -1.91
LINC00954-204ENST00000607100 SPRR2AP35326 72 aa3.14□□□□□ -1.91
LINC00954-204ENST00000607100 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
LINC00954-204ENST00000607100 SYNE1Q8NF91 8797 aaKnown RBP3.14□□□□□ -1.91
LINC00954-204ENST00000607100 KRTAP5-7Q6L8G8 165 aa3.08□□□□□ -1.92
LINC00954-204ENST00000607100 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
LINC00954-204ENST00000607100 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
LINC00954-204ENST00000607100 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
LINC00954-204ENST00000607100 SPRR2DP22532 72 aa3.01□□□□□ -1.93
LINC00954-204ENST00000607100 KRTAP5-10Q6L8G5 202 aa2.99□□□□□ -1.93
LINC00954-204ENST00000607100 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
LINC00954-204ENST00000607100 AHNAKQ09666 5890 aaKnown RBP2.95□□□□□ -1.94
LINC00954-204ENST00000607100 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
LINC00954-204ENST00000607100 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
LINC00954-204ENST00000607100 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
LINC00954-204ENST00000607100 PRM1P04553 51 aa2.79□□□□□ -1.96
LINC00954-204ENST00000607100 MT4P47944 62 aa2.66□□□□□ -1.98
LINC00954-204ENST00000607100 KRTAP20-2Q3LI61 65 aa2.62□□□□□ -1.99
LINC00954-204ENST00000607100 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
LINC00954-204ENST00000607100 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
LINC00954-204ENST00000607100 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
LINC00954-204ENST00000607100 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
LINC00954-204ENST00000607100 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
LINC00954-204ENST00000607100 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
LINC00954-204ENST00000607100 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
LINC00954-204ENST00000607100 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
LINC00954-204ENST00000607100 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
LINC00954-204ENST00000607100 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 48.6 ms