RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 UQCR11O14957 56 aa6.19□□□□□ -1.42
LINC00240-203ENST00000606878 KRTAP19-7Q3SYF9 63 aa6.19□□□□□ -1.42
LINC00240-203ENST00000606878 MT1EP04732 61 aa6.14□□□□□ -1.43
LINC00240-203ENST00000606878 TNP1P09430 55 aa6.14□□□□□ -1.43
LINC00240-203ENST00000606878 C10orf95Q9H7T3 257 aa6.14□□□□□ -1.43
LINC00240-203ENST00000606878 KRTAP19-5Q3LI72 72 aa6.1□□□□□ -1.43
LINC00240-203ENST00000606878 KRTAP19-3Q7Z4W3 81 aa6.08□□□□□ -1.44
LINC00240-203ENST00000606878 V9GYY9 64 aa6.07□□□□□ -1.44
LINC00240-203ENST00000606878 MIR22HGQ0VDD5 57 aa6.05□□□□□ -1.44
LINC00240-203ENST00000606878 Q1T7F1 81 aa6□□□□□ -1.45
LINC00240-203ENST00000606878 LCE3AQ5TA76 89 aa6□□□□□ -1.45
LINC00240-203ENST00000606878 PSPHP1O15172 72 aa5.99□□□□□ -1.45
LINC00240-203ENST00000606878 MT1GP13640 62 aa5.98□□□□□ -1.45
LINC00240-203ENST00000606878 K7ERS5 55 aa5.96□□□□□ -1.46
LINC00240-203ENST00000606878 PP632Q6XCG6 107 aa5.94□□□□□ -1.46
LINC00240-203ENST00000606878 KRTAP15-1Q3LI76 137 aa5.92□□□□□ -1.46
LINC00240-203ENST00000606878 KRTAP5-3Q6L8H2 238 aa5.89□□□□□ -1.47
LINC00240-203ENST00000606878 MT1LQ93083 61 aa5.89□□□□□ -1.47
LINC00240-203ENST00000606878 DSTQ03001 7570 aaKnown RBP5.88□□□□□ -1.47
LINC00240-203ENST00000606878 KRTAP25-1Q3LHN0 102 aa5.84□□□□□ -1.47
LINC00240-203ENST00000606878 MT1MQ8N339 61 aa5.84□□□□□ -1.47
LINC00240-203ENST00000606878 RPS28P62857 69 aaKnown RBP5.82□□□□□ -1.48
LINC00240-203ENST00000606878 A6NED7 52 aa5.81□□□□□ -1.48
LINC00240-203ENST00000606878 KRTAP12-3P60328 96 aa5.81□□□□□ -1.48
LINC00240-203ENST00000606878 PCP4P48539 62 aa5.8□□□□□ -1.48
LINC00240-203ENST00000606878 KRTAP4-3Q9BYR4 195 aa5.69□□□□□ -1.5
LINC00240-203ENST00000606878 CDC42SE1Q9NRR8 79 aa5.62□□□□□ -1.51
LINC00240-203ENST00000606878 ROMO1P60602 79 aa5.54□□□□□ -1.52
LINC00240-203ENST00000606878 MT4P47944 62 aa5.51□□□□□ -1.53
LINC00240-203ENST00000606878 KRTAP5-4Q6L8H1 288 aa5.49□□□□□ -1.53
LINC00240-203ENST00000606878 GPR98Q8WXG9 6306 aa5.4□□□□□ -1.54
LINC00240-203ENST00000606878 HMCN1Q96RW7 5635 aa5.39□□□□□ -1.55
LINC00240-203ENST00000606878 LCE3CQ5T5A8 94 aa5.37□□□□□ -1.55
LINC00240-203ENST00000606878 KRTAP5-5Q701N2 237 aaPredicted RBP5.32□□□□□ -1.56
LINC00240-203ENST00000606878 KRTAP12-4P60329 112 aa5.24□□□□□ -1.57
LINC00240-203ENST00000606878 SPRR5A0A1B0GTR4 108 aa5.19□□□□□ -1.58
LINC00240-203ENST00000606878 KRTAP20-2Q3LI61 65 aa5.17□□□□□ -1.58
LINC00240-203ENST00000606878 AHNAK2Q8IVF2 5795 aa5.13□□□□□ -1.59
LINC00240-203ENST00000606878 BRK1Q8WUW1 75 aa5.09□□□□□ -1.59
LINC00240-203ENST00000606878 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
LINC00240-203ENST00000606878 KRTAP5-10Q6L8G5 202 aa5.07□□□□□ -1.6
LINC00240-203ENST00000606878 MT1AP04731 61 aa5.02□□□□□ -1.61
LINC00240-203ENST00000606878 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
LINC00240-203ENST00000606878 KRTAP6-1Q3LI64 71 aa4.98□□□□□ -1.61
LINC00240-203ENST00000606878 KRTAP5-7Q6L8G8 165 aa4.87□□□□□ -1.63
LINC00240-203ENST00000606878 PMAIP1Q13794 54 aa4.82□□□□□ -1.64
LINC00240-203ENST00000606878 KRTAP5-2Q701N4 177 aa4.82□□□□□ -1.64
LINC00240-203ENST00000606878 KRTAP6-2Q3LI66 62 aa4.74□□□□□ -1.65
LINC00240-203ENST00000606878 MT3P25713 68 aa4.64□□□□□ -1.67
LINC00240-203ENST00000606878 PRAC1Q96KF2 57 aa4.57□□□□□ -1.68
LINC00240-203ENST00000606878 KRTAP5-8O75690 187 aa4.53□□□□□ -1.68
LINC00240-203ENST00000606878 PRO0628Q9UI54 55 aa4.51□□□□□ -1.69
LINC00240-203ENST00000606878 SVIPQ8NHG7 77 aa4.49□□□□□ -1.69
LINC00240-203ENST00000606878 OBSCNQ5VST9 7968 aa4.47□□□□□ -1.69
LINC00240-203ENST00000606878 A0A0A0MQY5 61 aa4.46□□□□□ -1.7
LINC00240-203ENST00000606878 LCE1EQ5T753 118 aa4.46□□□□□ -1.7
LINC00240-203ENST00000606878 KRTAP5-11Q6L8G4 156 aa4.46□□□□□ -1.7
LINC00240-203ENST00000606878 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.43□□□□□ -1.7
LINC00240-203ENST00000606878 KRTAP5-1Q6L8H4 278 aa4.31□□□□□ -1.72
LINC00240-203ENST00000606878 KTN1-AS1Q86SY8 53 aa4.28□□□□□ -1.72
LINC00240-203ENST00000606878 AHNAKQ09666 5890 aaKnown RBP4.23□□□□□ -1.73
LINC00240-203ENST00000606878 MUC5BQ9HC84 5762 aaPredicted RBP4.22□□□□□ -1.73
LINC00240-203ENST00000606878 MUC5ACP98088 5654 aa4.21□□□□□ -1.74
LINC00240-203ENST00000606878 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
LINC00240-203ENST00000606878 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
LINC00240-203ENST00000606878 LUZP6Q538Z0 58 aa3.93□□□□□ -1.78
LINC00240-203ENST00000606878 LCE1CQ5T751 118 aa3.9□□□□□ -1.79
LINC00240-203ENST00000606878 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
LINC00240-203ENST00000606878 NDUFAF8A1L188 74 aa3.83□□□□□ -1.8
LINC00240-203ENST00000606878 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
LINC00240-203ENST00000606878 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
LINC00240-203ENST00000606878 KRTAP21-2Q3LI59 83 aa3.28□□□□□ -1.88
LINC00240-203ENST00000606878 PHGR1C9JFL3 82 aa3.02□□□□□ -1.93
LINC00240-203ENST00000606878 PRM1P04553 51 aa2.82□□□□□ -1.96
LINC00240-203ENST00000606878 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
LINC00240-203ENST00000606878 INE1O15225 51 aa2.59□□□□□ -1.99
LINC00240-203ENST00000606878 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
LINC00240-203ENST00000606878 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 13.8 ms