RNA–Protein interactions for RNA: ENST00000606558.5

TRAM2-AS1-203, Transcript of TRAM2 antisense RNA 1 (head to head), humanhuman

TSL 2

Gene TRAM2-AS1, Length 553 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM2-AS1-203ENST00000606558 LYSTQ99698 3801 aa0.95□□□□□ -2.26
TRAM2-AS1-203ENST00000606558 SYNE2Q8WXH0 6885 aaKnown RBP0.94□□□□□ -2.26
TRAM2-AS1-203ENST00000606558 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
TRAM2-AS1-203ENST00000606558 NEBP20929 6669 aa0.93□□□□□ -2.26
TRAM2-AS1-203ENST00000606558 KMT2AQ03164 3969 aa0.92□□□□□ -2.26
TRAM2-AS1-203ENST00000606558 FAT2Q9NYQ8 4349 aa0.92□□□□□ -2.26
TRAM2-AS1-203ENST00000606558 KRTAP2-3P0C7H8 128 aa0.92□□□□□ -2.26
TRAM2-AS1-203ENST00000606558 HTN3P15516 51 aa0.92□□□□□ -2.26
TRAM2-AS1-203ENST00000606558 KRTAP2-4Q9BYR9 128 aa0.92□□□□□ -2.26
TRAM2-AS1-203ENST00000606558 KRTAP2-1Q9BYU5 128 aa0.92□□□□□ -2.26
TRAM2-AS1-203ENST00000606558 MYCBP2O75592 4640 aa0.92□□□□□ -2.26
TRAM2-AS1-203ENST00000606558 STARD9Q9P2P6 4700 aa0.91□□□□□ -2.26
TRAM2-AS1-203ENST00000606558 KRTAP8-1Q8IUC2 63 aa0.91□□□□□ -2.26
TRAM2-AS1-203ENST00000606558 DNAH17Q9UFH2 4485 aa0.91□□□□□ -2.26
TRAM2-AS1-203ENST00000606558 DNAH2Q9P225 4427 aa0.9□□□□□ -2.26
TRAM2-AS1-203ENST00000606558 DNAH6Q9C0G6 4158 aa0.9□□□□□ -2.26
TRAM2-AS1-203ENST00000606558 PKHD1L1Q86WI1 4243 aa0.9□□□□□ -2.27
TRAM2-AS1-203ENST00000606558 GPR98Q8WXG9 6306 aa0.9□□□□□ -2.27
TRAM2-AS1-203ENST00000606558 CSMD3Q7Z407 3707 aa0.89□□□□□ -2.27
TRAM2-AS1-203ENST00000606558 LRP1BQ9NZR2 4599 aa0.89□□□□□ -2.27
TRAM2-AS1-203ENST00000606558 APOBP04114 4563 aaKnown RBP0.89□□□□□ -2.27
TRAM2-AS1-203ENST00000606558 FAT1Q14517 4588 aa0.88□□□□□ -2.27
TRAM2-AS1-203ENST00000606558 DNAH5Q8TE73 4624 aa0.87□□□□□ -2.27
TRAM2-AS1-203ENST00000606558 PKD1P98161 4303 aa0.86□□□□□ -2.27
TRAM2-AS1-203ENST00000606558 LRP2P98164 4655 aa0.86□□□□□ -2.27
TRAM2-AS1-203ENST00000606558 VPS13BQ7Z7G8 4022 aa0.85□□□□□ -2.27
TRAM2-AS1-203ENST00000606558 DNAH8Q96JB1 4490 aa0.85□□□□□ -2.27
TRAM2-AS1-203ENST00000606558 MACF1Q9UPN3 7388 aaKnown RBP0.85□□□□□ -2.27
TRAM2-AS1-203ENST00000606558 DEFB4AO15263 64 aa0.84□□□□□ -2.27
TRAM2-AS1-203ENST00000606558 SSPOA2VEC9 5147 aa0.84□□□□□ -2.28
TRAM2-AS1-203ENST00000606558 FAT3Q8TDW7 4589 aa0.83□□□□□ -2.28
TRAM2-AS1-203ENST00000606558 TNXBP22105 4242 aa0.83□□□□□ -2.28
TRAM2-AS1-203ENST00000606558 LRP1Q07954 4544 aaKnown RBP0.81□□□□□ -2.28
TRAM2-AS1-203ENST00000606558 USH2AO75445 5202 aa0.79□□□□□ -2.28
TRAM2-AS1-203ENST00000606558 SMR3BP02814 79 aaPredicted RBP0.77□□□□□ -2.29
TRAM2-AS1-203ENST00000606558 MT1AP04731 61 aa0.77□□□□□ -2.29
TRAM2-AS1-203ENST00000606558 MDN1Q9NU22 5596 aa0.76□□□□□ -2.29
TRAM2-AS1-203ENST00000606558 PRM1P04553 51 aa0.75□□□□□ -2.29
TRAM2-AS1-203ENST00000606558 MUC12Q9UKN1 5478 aa0.75□□□□□ -2.29
TRAM2-AS1-203ENST00000606558 KMT2DO14686 5537 aa0.74□□□□□ -2.29
TRAM2-AS1-203ENST00000606558 LPAP08519 4548 aa0.73□□□□□ -2.29
TRAM2-AS1-203ENST00000606558 MUC17Q685J3 4493 aa0.73□□□□□ -2.29
TRAM2-AS1-203ENST00000606558 SPRR2BP35325 72 aa0.72□□□□□ -2.29
TRAM2-AS1-203ENST00000606558 KRTAP19-5Q3LI72 72 aa0.72□□□□□ -2.29
TRAM2-AS1-203ENST00000606558 DSTQ03001 7570 aaKnown RBP0.72□□□□□ -2.29
TRAM2-AS1-203ENST00000606558 AHNAK2Q8IVF2 5795 aa0.72□□□□□ -2.29
TRAM2-AS1-203ENST00000606558 SPRR2AP35326 72 aa0.71□□□□□ -2.3
TRAM2-AS1-203ENST00000606558 MT1HL1P0DM35 61 aa0.7□□□□□ -2.3
TRAM2-AS1-203ENST00000606558 KRTAP20-1Q3LI63 56 aa0.7□□□□□ -2.3
TRAM2-AS1-203ENST00000606558 SPRR2DP22532 72 aa0.69□□□□□ -2.3
TRAM2-AS1-203ENST00000606558 AHNAKQ09666 5890 aaKnown RBP0.69□□□□□ -2.3
TRAM2-AS1-203ENST00000606558 MT1EP04732 61 aa0.68□□□□□ -2.3
TRAM2-AS1-203ENST00000606558 KRTAP19-3Q7Z4W3 81 aa0.67□□□□□ -2.3
TRAM2-AS1-203ENST00000606558 SPRR2GQ9BYE4 73 aa0.67□□□□□ -2.3
TRAM2-AS1-203ENST00000606558 MUC5BQ9HC84 5762 aaPredicted RBP0.66□□□□□ -2.3
TRAM2-AS1-203ENST00000606558 MT1LQ93083 61 aa0.65□□□□□ -2.31
TRAM2-AS1-203ENST00000606558 FLGP20930 4061 aaPredicted RBP0.64□□□□□ -2.31
TRAM2-AS1-203ENST00000606558 SPRR2FQ96RM1 72 aa0.64□□□□□ -2.31
TRAM2-AS1-203ENST00000606558 SYNE1Q8NF91 8797 aaKnown RBP0.64□□□□□ -2.31
TRAM2-AS1-203ENST00000606558 MT1HP80294 61 aa0.63□□□□□ -2.31
TRAM2-AS1-203ENST00000606558 SPRR2EP22531 72 aa0.62□□□□□ -2.31
TRAM2-AS1-203ENST00000606558 KRTAP6-2Q3LI66 62 aa0.61□□□□□ -2.31
TRAM2-AS1-203ENST00000606558 MUC5ACP98088 5654 aa0.59□□□□□ -2.31
TRAM2-AS1-203ENST00000606558 KRTAP19-2Q3LHN2 52 aa0.59□□□□□ -2.31
TRAM2-AS1-203ENST00000606558 KRTAP19-8Q3LI54 63 aa0.59□□□□□ -2.31
TRAM2-AS1-203ENST00000606558 KRTAP21-1Q3LI58 79 aa0.59□□□□□ -2.31
TRAM2-AS1-203ENST00000606558 KRTAP19-6Q3LI70 58 aa0.59□□□□□ -2.31
TRAM2-AS1-203ENST00000606558 MT1XP80297 61 aa0.54□□□□□ -2.32
TRAM2-AS1-203ENST00000606558 MT2AP02795 61 aa0.53□□□□□ -2.32
TRAM2-AS1-203ENST00000606558 MT1FP04733 61 aa0.53□□□□□ -2.32
TRAM2-AS1-203ENST00000606558 MT1GP13640 62 aa0.49□□□□□ -2.33
TRAM2-AS1-203ENST00000606558 MT1MQ8N339 61 aa0.48□□□□□ -2.33
TRAM2-AS1-203ENST00000606558 MT4P47944 62 aa0.47□□□□□ -2.33
TRAM2-AS1-203ENST00000606558 KRTAP19-7Q3SYF9 63 aa0.47□□□□□ -2.33
TRAM2-AS1-203ENST00000606558 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
TRAM2-AS1-203ENST00000606558 MT1BP07438 61 aa0.45□□□□□ -2.34
TRAM2-AS1-203ENST00000606558 KRTAP20-2Q3LI61 65 aa0.41□□□□□ -2.34
TRAM2-AS1-203ENST00000606558 KRTAP6-1Q3LI64 71 aa0.38□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 49.9 ms