RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 KRTAP25-1Q3LHN0 102 aa5.3□□□□□ -1.56
CTSA-211ENST00000606066 LCE3AQ5TA76 89 aa5.29□□□□□ -1.56
CTSA-211ENST00000606066 MT1EP04732 61 aa5.28□□□□□ -1.56
CTSA-211ENST00000606066 KRTAP19-5Q3LI72 72 aa5.28□□□□□ -1.56
CTSA-211ENST00000606066 KRTAP19-3Q7Z4W3 81 aa5.19□□□□□ -1.58
CTSA-211ENST00000606066 ROMO1P60602 79 aa5.17□□□□□ -1.58
CTSA-211ENST00000606066 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
CTSA-211ENST00000606066 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
CTSA-211ENST00000606066 KRTAP12-3P60328 96 aa5.12□□□□□ -1.59
CTSA-211ENST00000606066 MT1GP13640 62 aa5.11□□□□□ -1.59
CTSA-211ENST00000606066 KRTAP4-9Q9BYQ8 210 aa5.11□□□□□ -1.59
CTSA-211ENST00000606066 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
CTSA-211ENST00000606066 MT1LQ93083 61 aa5.08□□□□□ -1.6
CTSA-211ENST00000606066 HMCN1Q96RW7 5635 aa5.06□□□□□ -1.6
CTSA-211ENST00000606066 BRK1Q8WUW1 75 aa5.04□□□□□ -1.6
CTSA-211ENST00000606066 MT1MQ8N339 61 aa5□□□□□ -1.61
CTSA-211ENST00000606066 AHNAK2Q8IVF2 5795 aa4.98□□□□□ -1.61
CTSA-211ENST00000606066 LCE1DQ5T752 114 aa4.96□□□□□ -1.62
CTSA-211ENST00000606066 SVIPQ8NHG7 77 aa4.95□□□□□ -1.62
CTSA-211ENST00000606066 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
CTSA-211ENST00000606066 LCE4AQ5TA78 99 aa4.9□□□□□ -1.63
CTSA-211ENST00000606066 KRTAP15-1Q3LI76 137 aa4.88□□□□□ -1.63
CTSA-211ENST00000606066 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
CTSA-211ENST00000606066 MT4P47944 62 aa4.83□□□□□ -1.64
CTSA-211ENST00000606066 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
CTSA-211ENST00000606066 KRTAP5-10Q6L8G5 202 aa4.81□□□□□ -1.64
CTSA-211ENST00000606066 PMAIP1Q13794 54 aa4.77□□□□□ -1.65
CTSA-211ENST00000606066 KRTAP5-4Q6L8H1 288 aa4.76□□□□□ -1.65
CTSA-211ENST00000606066 LCE3CQ5T5A8 94 aa4.74□□□□□ -1.65
CTSA-211ENST00000606066 KRTAP4-6Q9BYQ5 205 aa4.7□□□□□ -1.66
CTSA-211ENST00000606066 KRTAP5-7Q6L8G8 165 aa4.69□□□□□ -1.66
CTSA-211ENST00000606066 PRO0628Q9UI54 55 aa4.64□□□□□ -1.67
CTSA-211ENST00000606066 KRTAP5-3Q6L8H2 238 aa4.61□□□□□ -1.67
CTSA-211ENST00000606066 LOC100996750A0A140TA64 210 aa4.56□□□□□ -1.68
CTSA-211ENST00000606066 KRTAP5-5Q701N2 237 aaPredicted RBP4.55□□□□□ -1.68
CTSA-211ENST00000606066 KRTAP20-2Q3LI61 65 aa4.48□□□□□ -1.69
CTSA-211ENST00000606066 PRAC1Q96KF2 57 aa4.47□□□□□ -1.69
CTSA-211ENST00000606066 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.7
CTSA-211ENST00000606066 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
CTSA-211ENST00000606066 KRTAP9-6A8MVA2 160 aa4.4□□□□□ -1.71
CTSA-211ENST00000606066 KTN1-AS1Q86SY8 53 aa4.38□□□□□ -1.71
CTSA-211ENST00000606066 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
CTSA-211ENST00000606066 MT1AP04731 61 aa4.34□□□□□ -1.71
CTSA-211ENST00000606066 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
CTSA-211ENST00000606066 AHNAKQ09666 5890 aaKnown RBP4.27□□□□□ -1.73
CTSA-211ENST00000606066 MUC5BQ9HC84 5762 aaPredicted RBP4.22□□□□□ -1.73
CTSA-211ENST00000606066 KRTAP4-11Q9BYQ6 195 aa4.2□□□□□ -1.74
CTSA-211ENST00000606066 KRTAP9-4Q9BYQ2 154 aa4.18□□□□□ -1.74
CTSA-211ENST00000606066 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
CTSA-211ENST00000606066 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
CTSA-211ENST00000606066 KRTAP5-8O75690 187 aa4.06□□□□□ -1.76
CTSA-211ENST00000606066 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
CTSA-211ENST00000606066 OBSCNQ5VST9 7968 aa4.04□□□□□ -1.76
CTSA-211ENST00000606066 MT3P25713 68 aa3.99□□□□□ -1.77
CTSA-211ENST00000606066 KRTAP9-9Q9BYP9 154 aa3.91□□□□□ -1.78
CTSA-211ENST00000606066 LUZP6Q538Z0 58 aa3.83□□□□□ -1.8
CTSA-211ENST00000606066 KRTAP5-1Q6L8H4 278 aa3.75□□□□□ -1.81
CTSA-211ENST00000606066 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
CTSA-211ENST00000606066 LCE3DQ9BYE3 92 aa3.49□□□□□ -1.85
CTSA-211ENST00000606066 LCE1BQ5T7P3 118 aa3.35□□□□□ -1.87
CTSA-211ENST00000606066 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
CTSA-211ENST00000606066 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
CTSA-211ENST00000606066 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
CTSA-211ENST00000606066 NDUFAF8A1L188 74 aa3.29□□□□□ -1.88
CTSA-211ENST00000606066 H3BS24 57 aa3.24□□□□□ -1.89
CTSA-211ENST00000606066 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
CTSA-211ENST00000606066 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
CTSA-211ENST00000606066 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
CTSA-211ENST00000606066 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
CTSA-211ENST00000606066 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
CTSA-211ENST00000606066 A0A0A0MQY5 61 aa2.8□□□□□ -1.96
CTSA-211ENST00000606066 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
CTSA-211ENST00000606066 INE1O15225 51 aa2.73□□□□□ -1.97
CTSA-211ENST00000606066 PRM1P04553 51 aa2.64□□□□□ -1.99
CTSA-211ENST00000606066 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
CTSA-211ENST00000606066 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
CTSA-211ENST00000606066 KRTAP21-1Q3LI58 79 aa2.16□□□□□ -2.06
CTSA-211ENST00000606066 MUC16Q8WXI7 14507 aa1.71□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 65.5 ms