RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 SPATA8Q6RVD6 105 aa4.95□□□□□ -1.62
NEDD8-MDP1-204ENST00000605847 SYNE1Q8NF91 8797 aaKnown RBP4.95□□□□□ -1.62
NEDD8-MDP1-204ENST00000605847 TNP1P09430 55 aa4.93□□□□□ -1.62
NEDD8-MDP1-204ENST00000605847 KRTAP12-1P59990 96 aa4.93□□□□□ -1.62
NEDD8-MDP1-204ENST00000605847 MUC5ACP98088 5654 aa4.92□□□□□ -1.62
NEDD8-MDP1-204ENST00000605847 CCDC179H3BU77 68 aa4.91□□□□□ -1.62
NEDD8-MDP1-204ENST00000605847 AHNAKQ09666 5890 aaKnown RBP4.9□□□□□ -1.62
NEDD8-MDP1-204ENST00000605847 SEC61GP60059 68 aa4.9□□□□□ -1.63
NEDD8-MDP1-204ENST00000605847 KRTAP5-8O75690 187 aa4.89□□□□□ -1.63
NEDD8-MDP1-204ENST00000605847 SERP1Q9Y6X1 66 aa4.89□□□□□ -1.63
NEDD8-MDP1-204ENST00000605847 KRTAP12-3P60328 96 aa4.87□□□□□ -1.63
NEDD8-MDP1-204ENST00000605847 LOC100996750A0A140TA64 210 aa4.86□□□□□ -1.63
NEDD8-MDP1-204ENST00000605847 MUC5BQ9HC84 5762 aaPredicted RBP4.84□□□□□ -1.63
NEDD8-MDP1-204ENST00000605847 A0A1B0GU33 70 aa4.81□□□□□ -1.64
NEDD8-MDP1-204ENST00000605847 TMEM258P61165 79 aa4.81□□□□□ -1.64
NEDD8-MDP1-204ENST00000605847 SNURFQ9Y675 71 aa4.79□□□□□ -1.64
NEDD8-MDP1-204ENST00000605847 H7BZZ5 65 aa4.78□□□□□ -1.64
NEDD8-MDP1-204ENST00000605847 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
NEDD8-MDP1-204ENST00000605847 KRTAP9-9Q9BYP9 154 aa4.77□□□□□ -1.65
NEDD8-MDP1-204ENST00000605847 ATP5EP56381 51 aaPredicted RBP4.76□□□□□ -1.65
NEDD8-MDP1-204ENST00000605847 SPANXA2-OT1Q8N9U9 137 aa4.74□□□□□ -1.65
NEDD8-MDP1-204ENST00000605847 SMIM26A0A096LP01 95 aa4.71□□□□□ -1.66
NEDD8-MDP1-204ENST00000605847 RPS28P62857 69 aaKnown RBP4.68□□□□□ -1.66
NEDD8-MDP1-204ENST00000605847 COA5Q86WW8 74 aa4.66□□□□□ -1.66
NEDD8-MDP1-204ENST00000605847 A8MU10 97 aa4.63□□□□□ -1.67
NEDD8-MDP1-204ENST00000605847 OBSCNQ5VST9 7968 aa4.59□□□□□ -1.67
NEDD8-MDP1-204ENST00000605847 MT1AP04731 61 aa4.58□□□□□ -1.68
NEDD8-MDP1-204ENST00000605847 KRTAP6-1Q3LI64 71 aa4.58□□□□□ -1.68
NEDD8-MDP1-204ENST00000605847 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
NEDD8-MDP1-204ENST00000605847 KRTAP6-2Q3LI66 62 aa4.51□□□□□ -1.69
NEDD8-MDP1-204ENST00000605847 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
NEDD8-MDP1-204ENST00000605847 A0A1B0GU69 56 aa4.47□□□□□ -1.69
NEDD8-MDP1-204ENST00000605847 V9GYY9 64 aa4.47□□□□□ -1.69
NEDD8-MDP1-204ENST00000605847 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
NEDD8-MDP1-204ENST00000605847 Q1T7F1 81 aa4.43□□□□□ -1.7
NEDD8-MDP1-204ENST00000605847 LCE3CQ5T5A8 94 aa4.41□□□□□ -1.7
NEDD8-MDP1-204ENST00000605847 KRTAP5-1Q6L8H4 278 aa4.4□□□□□ -1.71
NEDD8-MDP1-204ENST00000605847 LINC01558Q9Y6Z2 57 aa4.37□□□□□ -1.71
NEDD8-MDP1-204ENST00000605847 KRTAP15-1Q3LI76 137 aa4.34□□□□□ -1.71
NEDD8-MDP1-204ENST00000605847 PRR15LQ9BU68 103 aa4.32□□□□□ -1.72
NEDD8-MDP1-204ENST00000605847 PSPHP1O15172 72 aa4.3□□□□□ -1.72
NEDD8-MDP1-204ENST00000605847 MT3P25713 68 aa4.24□□□□□ -1.73
NEDD8-MDP1-204ENST00000605847 A6NED7 52 aa4.21□□□□□ -1.74
NEDD8-MDP1-204ENST00000605847 UQCR11O14957 56 aa4.19□□□□□ -1.74
NEDD8-MDP1-204ENST00000605847 BRK1Q8WUW1 75 aa4.18□□□□□ -1.74
NEDD8-MDP1-204ENST00000605847 CDC42SE1Q9NRR8 79 aa4.16□□□□□ -1.74
NEDD8-MDP1-204ENST00000605847 PRO0628Q9UI54 55 aa4.15□□□□□ -1.75
NEDD8-MDP1-204ENST00000605847 KRTAP9-6A8MVA2 160 aa4.13□□□□□ -1.75
NEDD8-MDP1-204ENST00000605847 MIR22HGQ0VDD5 57 aa4.12□□□□□ -1.75
NEDD8-MDP1-204ENST00000605847 KRTAP23-1A1A580 65 aa4.09□□□□□ -1.75
NEDD8-MDP1-204ENST00000605847 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
NEDD8-MDP1-204ENST00000605847 K7ERS5 55 aa3.99□□□□□ -1.77
NEDD8-MDP1-204ENST00000605847 PMAIP1Q13794 54 aa3.98□□□□□ -1.77
NEDD8-MDP1-204ENST00000605847 SVIPQ8NHG7 77 aa3.91□□□□□ -1.78
NEDD8-MDP1-204ENST00000605847 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
NEDD8-MDP1-204ENST00000605847 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
NEDD8-MDP1-204ENST00000605847 KRTAP4-2Q9BYR5 136 aa3.83□□□□□ -1.8
NEDD8-MDP1-204ENST00000605847 ROMO1P60602 79 aa3.77□□□□□ -1.81
NEDD8-MDP1-204ENST00000605847 LCE1CQ5T751 118 aa3.73□□□□□ -1.81
NEDD8-MDP1-204ENST00000605847 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
NEDD8-MDP1-204ENST00000605847 PRAC1Q96KF2 57 aa3.65□□□□□ -1.83
NEDD8-MDP1-204ENST00000605847 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
NEDD8-MDP1-204ENST00000605847 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
NEDD8-MDP1-204ENST00000605847 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
NEDD8-MDP1-204ENST00000605847 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.29□□□□□ -1.88
NEDD8-MDP1-204ENST00000605847 H3BS24 57 aa3.08□□□□□ -1.92
NEDD8-MDP1-204ENST00000605847 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
NEDD8-MDP1-204ENST00000605847 LUZP6Q538Z0 58 aa3.07□□□□□ -1.92
NEDD8-MDP1-204ENST00000605847 KRTAP21-2Q3LI59 83 aa3.01□□□□□ -1.93
NEDD8-MDP1-204ENST00000605847 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
NEDD8-MDP1-204ENST00000605847 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
NEDD8-MDP1-204ENST00000605847 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
NEDD8-MDP1-204ENST00000605847 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
NEDD8-MDP1-204ENST00000605847 A0A0A0MQY5 61 aa2.69□□□□□ -1.98
NEDD8-MDP1-204ENST00000605847 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
NEDD8-MDP1-204ENST00000605847 INE1O15225 51 aa2.52□□□□□ -2.01
NEDD8-MDP1-204ENST00000605847 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
NEDD8-MDP1-204ENST00000605847 PRM1P04553 51 aa1.94□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 109.2 ms