RNA–Protein interactions for RNA: ENST00000604828.1

FOCAD-214, Transcript of focadhesin, humanhuman

Gene FOCAD, Length 1,973 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-214ENST00000604828 MT1BP07438 61 aa4.14□□□□□ -1.75
FOCAD-214ENST00000604828 KRTAP8-1Q8IUC2 63 aa4.11□□□□□ -1.75
FOCAD-214ENST00000604828 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
FOCAD-214ENST00000604828 KRTAP19-6Q3LI70 58 aa4.11□□□□□ -1.75
FOCAD-214ENST00000604828 MACF1Q9UPN3 7388 aaKnown RBP4.1□□□□□ -1.75
FOCAD-214ENST00000604828 MT1XP80297 61 aa4.1□□□□□ -1.75
FOCAD-214ENST00000604828 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
FOCAD-214ENST00000604828 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
FOCAD-214ENST00000604828 KRTAP10-12P60413 245 aa4.02□□□□□ -1.77
FOCAD-214ENST00000604828 PRO2289Q9P1D8 64 aa3.98□□□□□ -1.77
FOCAD-214ENST00000604828 KRTAP12-3P60328 96 aa3.97□□□□□ -1.77
FOCAD-214ENST00000604828 KRTAP10-7P60409 375 aaPredicted RBP3.94□□□□□ -1.78
FOCAD-214ENST00000604828 KMT2DO14686 5537 aa3.91□□□□□ -1.78
FOCAD-214ENST00000604828 MUC12Q9UKN1 5478 aa3.85□□□□□ -1.79
FOCAD-214ENST00000604828 MDN1Q9NU22 5596 aa3.8□□□□□ -1.8
FOCAD-214ENST00000604828 KRTAP19-5Q3LI72 72 aa3.8□□□□□ -1.8
FOCAD-214ENST00000604828 KRTAP6-3Q3LI67 103 aa3.78□□□□□ -1.8
FOCAD-214ENST00000604828 LCE3CQ5T5A8 94 aa3.74□□□□□ -1.81
FOCAD-214ENST00000604828 NEBP20929 6669 aa3.74□□□□□ -1.81
FOCAD-214ENST00000604828 INE1O15225 51 aa3.72□□□□□ -1.81
FOCAD-214ENST00000604828 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
FOCAD-214ENST00000604828 KRTAP19-7Q3SYF9 63 aa3.65□□□□□ -1.82
FOCAD-214ENST00000604828 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.63□□□□□ -1.83
FOCAD-214ENST00000604828 SPRR2FQ96RM1 72 aa3.63□□□□□ -1.83
FOCAD-214ENST00000604828 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
FOCAD-214ENST00000604828 MT1EP04732 61 aa3.56□□□□□ -1.84
FOCAD-214ENST00000604828 MT1LQ93083 61 aa3.56□□□□□ -1.84
FOCAD-214ENST00000604828 SPRR2EP22531 72 aa3.52□□□□□ -1.85
FOCAD-214ENST00000604828 SPRR2BP35325 72 aa3.52□□□□□ -1.85
FOCAD-214ENST00000604828 SPRR2AP35326 72 aa3.52□□□□□ -1.85
FOCAD-214ENST00000604828 LCE1AQ5T7P2 110 aa3.52□□□□□ -1.85
FOCAD-214ENST00000604828 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
FOCAD-214ENST00000604828 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
FOCAD-214ENST00000604828 KRTAP2-1Q9BYU5 128 aa3.51□□□□□ -1.85
FOCAD-214ENST00000604828 KRTAP20-1Q3LI63 56 aa3.44□□□□□ -1.86
FOCAD-214ENST00000604828 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
FOCAD-214ENST00000604828 SPRR2DP22532 72 aa3.4□□□□□ -1.86
FOCAD-214ENST00000604828 KRTAP5-11Q6L8G4 156 aa3.39□□□□□ -1.87
FOCAD-214ENST00000604828 HMCN1Q96RW7 5635 aa3.35□□□□□ -1.87
FOCAD-214ENST00000604828 KRTAP19-3Q7Z4W3 81 aa3.35□□□□□ -1.87
FOCAD-214ENST00000604828 MT1GP13640 62 aa3.34□□□□□ -1.88
FOCAD-214ENST00000604828 MT1MQ8N339 61 aa3.32□□□□□ -1.88
FOCAD-214ENST00000604828 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
FOCAD-214ENST00000604828 KRTAP4-3Q9BYR4 195 aa3.27□□□□□ -1.89
FOCAD-214ENST00000604828 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
FOCAD-214ENST00000604828 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
FOCAD-214ENST00000604828 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
FOCAD-214ENST00000604828 KRTAP12-4P60329 112 aa3.03□□□□□ -1.92
FOCAD-214ENST00000604828 MT1AP04731 61 aa3.02□□□□□ -1.93
FOCAD-214ENST00000604828 MT4P47944 62 aa2.99□□□□□ -1.93
FOCAD-214ENST00000604828 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
FOCAD-214ENST00000604828 KRTAP6-1Q3LI64 71 aa2.98□□□□□ -1.93
FOCAD-214ENST00000604828 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
FOCAD-214ENST00000604828 SYNE1Q8NF91 8797 aaKnown RBP2.94□□□□□ -1.94
FOCAD-214ENST00000604828 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
FOCAD-214ENST00000604828 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
FOCAD-214ENST00000604828 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
FOCAD-214ENST00000604828 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
FOCAD-214ENST00000604828 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
FOCAD-214ENST00000604828 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
FOCAD-214ENST00000604828 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
FOCAD-214ENST00000604828 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
FOCAD-214ENST00000604828 MT3P25713 68 aa2.7□□□□□ -1.98
FOCAD-214ENST00000604828 OBSCNQ5VST9 7968 aa2.69□□□□□ -1.98
FOCAD-214ENST00000604828 PRM1P04553 51 aa2.68□□□□□ -1.98
FOCAD-214ENST00000604828 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
FOCAD-214ENST00000604828 KRTAP5-7Q6L8G8 165 aa2.56□□□□□ -2
FOCAD-214ENST00000604828 MUC5ACP98088 5654 aa2.4□□□□□ -2.02
FOCAD-214ENST00000604828 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
FOCAD-214ENST00000604828 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
FOCAD-214ENST00000604828 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
FOCAD-214ENST00000604828 LCE1FQ5T754 118 aa2.14□□□□□ -2.07
FOCAD-214ENST00000604828 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
FOCAD-214ENST00000604828 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
FOCAD-214ENST00000604828 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
FOCAD-214ENST00000604828 MUC19Q7Z5P9 8384 aa1.68□□□□□ -2.14
FOCAD-214ENST00000604828 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
FOCAD-214ENST00000604828 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 56 ms