RNA–Protein interactions for RNA: ENST00000604724.5

LINC01235-201, Transcript of long intergenic non-protein coding RNA 1235, humanhuman

TSL 2 BASIC

Gene LINC01235, Length 2,328 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01235-201ENST00000604724 SSPOA2VEC9 5147 aa4.23□□□□□ -1.73
LINC01235-201ENST00000604724 KRTAP8-1Q8IUC2 63 aa4.21□□□□□ -1.74
LINC01235-201ENST00000604724 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
LINC01235-201ENST00000604724 KRTAP19-6Q3LI70 58 aa4.1□□□□□ -1.75
LINC01235-201ENST00000604724 KRTAP19-5Q3LI72 72 aa4.07□□□□□ -1.76
LINC01235-201ENST00000604724 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
LINC01235-201ENST00000604724 SPRR5A0A1B0GTR4 108 aa4.04□□□□□ -1.76
LINC01235-201ENST00000604724 LCE5AQ5TCM9 118 aa4.04□□□□□ -1.76
LINC01235-201ENST00000604724 FCGBPQ9Y6R7 5405 aaPredicted RBP3.99□□□□□ -1.77
LINC01235-201ENST00000604724 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
LINC01235-201ENST00000604724 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
LINC01235-201ENST00000604724 MT1EP04732 61 aa3.88□□□□□ -1.79
LINC01235-201ENST00000604724 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
LINC01235-201ENST00000604724 CRCT1Q9UGL9 99 aa3.87□□□□□ -1.79
LINC01235-201ENST00000604724 MT1LQ93083 61 aa3.83□□□□□ -1.8
LINC01235-201ENST00000604724 MACF1Q9UPN3 7388 aaKnown RBP3.83□□□□□ -1.8
LINC01235-201ENST00000604724 MUC12Q9UKN1 5478 aa3.82□□□□□ -1.8
LINC01235-201ENST00000604724 KRTAP19-4Q3LI73 84 aa3.78□□□□□ -1.8
LINC01235-201ENST00000604724 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
LINC01235-201ENST00000604724 SYNE2Q8WXH0 6885 aaKnown RBP3.72□□□□□ -1.81
LINC01235-201ENST00000604724 SPRR2FQ96RM1 72 aa3.7□□□□□ -1.82
LINC01235-201ENST00000604724 KRTAP19-3Q7Z4W3 81 aa3.69□□□□□ -1.82
LINC01235-201ENST00000604724 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
LINC01235-201ENST00000604724 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
LINC01235-201ENST00000604724 KRTAP4-3Q9BYR4 195 aa3.66□□□□□ -1.82
LINC01235-201ENST00000604724 MT1MQ8N339 61 aa3.65□□□□□ -1.83
LINC01235-201ENST00000604724 MT1GP13640 62 aa3.64□□□□□ -1.83
LINC01235-201ENST00000604724 HMCN1Q96RW7 5635 aa3.62□□□□□ -1.83
LINC01235-201ENST00000604724 MDN1Q9NU22 5596 aa3.61□□□□□ -1.83
LINC01235-201ENST00000604724 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
LINC01235-201ENST00000604724 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
LINC01235-201ENST00000604724 LCE1AQ5T7P2 110 aa3.51□□□□□ -1.85
LINC01235-201ENST00000604724 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
LINC01235-201ENST00000604724 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
LINC01235-201ENST00000604724 KRTAP2-1Q9BYU5 128 aa3.46□□□□□ -1.86
LINC01235-201ENST00000604724 SPRR2EP22531 72 aa3.45□□□□□ -1.86
LINC01235-201ENST00000604724 SPRR2BP35325 72 aa3.45□□□□□ -1.86
LINC01235-201ENST00000604724 SPRR2AP35326 72 aa3.45□□□□□ -1.86
LINC01235-201ENST00000604724 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
LINC01235-201ENST00000604724 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
LINC01235-201ENST00000604724 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
LINC01235-201ENST00000604724 SPRR2DP22532 72 aa3.31□□□□□ -1.88
LINC01235-201ENST00000604724 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
LINC01235-201ENST00000604724 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
LINC01235-201ENST00000604724 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
LINC01235-201ENST00000604724 MT1AP04731 61 aa3.22□□□□□ -1.89
LINC01235-201ENST00000604724 NEBP20929 6669 aa3.19□□□□□ -1.9
LINC01235-201ENST00000604724 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
LINC01235-201ENST00000604724 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
LINC01235-201ENST00000604724 MUC5BQ9HC84 5762 aaPredicted RBP3.1□□□□□ -1.91
LINC01235-201ENST00000604724 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
LINC01235-201ENST00000604724 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
LINC01235-201ENST00000604724 LCE1EQ5T753 118 aa3.03□□□□□ -1.92
LINC01235-201ENST00000604724 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
LINC01235-201ENST00000604724 KRTAP12-4P60329 112 aa2.99□□□□□ -1.93
LINC01235-201ENST00000604724 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
LINC01235-201ENST00000604724 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
LINC01235-201ENST00000604724 LCE3DQ9BYE3 92 aa2.93□□□□□ -1.94
LINC01235-201ENST00000604724 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
LINC01235-201ENST00000604724 MT4P47944 62 aa2.92□□□□□ -1.94
LINC01235-201ENST00000604724 MT3P25713 68 aa2.9□□□□□ -1.95
LINC01235-201ENST00000604724 LCE3EQ5T5B0 92 aa2.85□□□□□ -1.95
LINC01235-201ENST00000604724 KRTAP20-2Q3LI61 65 aa2.84□□□□□ -1.96
LINC01235-201ENST00000604724 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
LINC01235-201ENST00000604724 KRTAP5-7Q6L8G8 165 aa2.69□□□□□ -1.98
LINC01235-201ENST00000604724 PRM1P04553 51 aa2.67□□□□□ -1.98
LINC01235-201ENST00000604724 KRTAP5-10Q6L8G5 202 aa2.6□□□□□ -1.99
LINC01235-201ENST00000604724 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
LINC01235-201ENST00000604724 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
LINC01235-201ENST00000604724 MUC5ACP98088 5654 aa2.44□□□□□ -2.02
LINC01235-201ENST00000604724 LCE1BQ5T7P3 118 aa2.39□□□□□ -2.03
LINC01235-201ENST00000604724 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
LINC01235-201ENST00000604724 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
LINC01235-201ENST00000604724 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
LINC01235-201ENST00000604724 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
LINC01235-201ENST00000604724 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
LINC01235-201ENST00000604724 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 32.6 ms