RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 MT1LQ93083 61 aa5.83□□□□□ -1.48
TUBE1-206ENST00000603722 C10orf95Q9H7T3 257 aa5.83□□□□□ -1.48
TUBE1-206ENST00000603722 TNP1P09430 55 aa5.82□□□□□ -1.48
TUBE1-206ENST00000603722 MT1MQ8N339 61 aa5.82□□□□□ -1.48
TUBE1-206ENST00000603722 PRR15LQ9BU68 103 aa5.82□□□□□ -1.48
TUBE1-206ENST00000603722 ATP5EP56381 51 aaPredicted RBP5.79□□□□□ -1.48
TUBE1-206ENST00000603722 LINC01558Q9Y6Z2 57 aa5.73□□□□□ -1.49
TUBE1-206ENST00000603722 HMCN1Q96RW7 5635 aa5.72□□□□□ -1.49
TUBE1-206ENST00000603722 KRTAP4-2Q9BYR5 136 aa5.72□□□□□ -1.49
TUBE1-206ENST00000603722 KRTAP4-3Q9BYR4 195 aa5.7□□□□□ -1.5
TUBE1-206ENST00000603722 MT4P47944 62 aa5.68□□□□□ -1.5
TUBE1-206ENST00000603722 LCE4AQ5TA78 99 aa5.68□□□□□ -1.5
TUBE1-206ENST00000603722 TMEM258P61165 79 aa5.62□□□□□ -1.51
TUBE1-206ENST00000603722 UQCR11O14957 56 aa5.61□□□□□ -1.51
TUBE1-206ENST00000603722 KRTAP4-11Q9BYQ6 195 aa5.61□□□□□ -1.51
TUBE1-206ENST00000603722 KRTAP12-3P60328 96 aa5.59□□□□□ -1.51
TUBE1-206ENST00000603722 KRTAP5-4Q6L8H1 288 aa5.57□□□□□ -1.52
TUBE1-206ENST00000603722 PCP4P48539 62 aa5.53□□□□□ -1.52
TUBE1-206ENST00000603722 KRTAP19-4Q3LI73 84 aa5.53□□□□□ -1.52
TUBE1-206ENST00000603722 AHNAK2Q8IVF2 5795 aa5.52□□□□□ -1.53
TUBE1-206ENST00000603722 MIR22HGQ0VDD5 57 aa5.49□□□□□ -1.53
TUBE1-206ENST00000603722 KRTAP25-1Q3LHN0 102 aa5.44□□□□□ -1.54
TUBE1-206ENST00000603722 K7ERS5 55 aa5.4□□□□□ -1.54
TUBE1-206ENST00000603722 PSPHP1O15172 72 aa5.36□□□□□ -1.55
TUBE1-206ENST00000603722 KRTAP5-10Q6L8G5 202 aa5.34□□□□□ -1.55
TUBE1-206ENST00000603722 KRTAP5-5Q701N2 237 aaPredicted RBP5.34□□□□□ -1.55
TUBE1-206ENST00000603722 V9GYY9 64 aa5.32□□□□□ -1.56
TUBE1-206ENST00000603722 Q1T7F1 81 aa5.28□□□□□ -1.56
TUBE1-206ENST00000603722 KRTAP20-2Q3LI61 65 aa5.28□□□□□ -1.56
TUBE1-206ENST00000603722 RPS28P62857 69 aaKnown RBP5.25□□□□□ -1.57
TUBE1-206ENST00000603722 SYNE1Q8NF91 8797 aaKnown RBP5.22□□□□□ -1.57
TUBE1-206ENST00000603722 SPRR5A0A1B0GTR4 108 aa5.22□□□□□ -1.57
TUBE1-206ENST00000603722 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.58
TUBE1-206ENST00000603722 KRTAP12-4P60329 112 aa5.21□□□□□ -1.58
TUBE1-206ENST00000603722 KRTAP5-3Q6L8H2 238 aa5.21□□□□□ -1.58
TUBE1-206ENST00000603722 KRTAP15-1Q3LI76 137 aa5.19□□□□□ -1.58
TUBE1-206ENST00000603722 A6NED7 52 aa5.17□□□□□ -1.58
TUBE1-206ENST00000603722 KRTAP5-7Q6L8G8 165 aa5.14□□□□□ -1.59
TUBE1-206ENST00000603722 LCE3CQ5T5A8 94 aa5.13□□□□□ -1.59
TUBE1-206ENST00000603722 CDC42SE1Q9NRR8 79 aa5.11□□□□□ -1.59
TUBE1-206ENST00000603722 ROMO1P60602 79 aa5.02□□□□□ -1.61
TUBE1-206ENST00000603722 SVIPQ8NHG7 77 aa5.02□□□□□ -1.61
TUBE1-206ENST00000603722 MT1AP04731 61 aa4.95□□□□□ -1.62
TUBE1-206ENST00000603722 KRTAP6-1Q3LI64 71 aa4.94□□□□□ -1.62
TUBE1-206ENST00000603722 KRTAP5-2Q701N4 177 aa4.88□□□□□ -1.63
TUBE1-206ENST00000603722 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
TUBE1-206ENST00000603722 KRTAP6-2Q3LI66 62 aa4.73□□□□□ -1.65
TUBE1-206ENST00000603722 KRTAP5-8O75690 187 aa4.66□□□□□ -1.66
TUBE1-206ENST00000603722 BRK1Q8WUW1 75 aa4.65□□□□□ -1.67
TUBE1-206ENST00000603722 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
TUBE1-206ENST00000603722 AHNAKQ09666 5890 aaKnown RBP4.58□□□□□ -1.68
TUBE1-206ENST00000603722 MUC5BQ9HC84 5762 aaPredicted RBP4.57□□□□□ -1.68
TUBE1-206ENST00000603722 MUC5ACP98088 5654 aa4.56□□□□□ -1.68
TUBE1-206ENST00000603722 MT3P25713 68 aa4.53□□□□□ -1.68
TUBE1-206ENST00000603722 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
TUBE1-206ENST00000603722 PRO0628Q9UI54 55 aa4.39□□□□□ -1.71
TUBE1-206ENST00000603722 KRTAP5-1Q6L8H4 278 aa4.38□□□□□ -1.71
TUBE1-206ENST00000603722 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
TUBE1-206ENST00000603722 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
TUBE1-206ENST00000603722 PRAC1Q96KF2 57 aa4.12□□□□□ -1.75
TUBE1-206ENST00000603722 KTN1-AS1Q86SY8 53 aa4.1□□□□□ -1.75
TUBE1-206ENST00000603722 LCE1BQ5T7P3 118 aa3.97□□□□□ -1.77
TUBE1-206ENST00000603722 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
TUBE1-206ENST00000603722 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
TUBE1-206ENST00000603722 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
TUBE1-206ENST00000603722 LCE3DQ9BYE3 92 aa3.69□□□□□ -1.82
TUBE1-206ENST00000603722 LUZP6Q538Z0 58 aa3.47□□□□□ -1.85
TUBE1-206ENST00000603722 LCE3EQ5T5B0 92 aa3.45□□□□□ -1.86
TUBE1-206ENST00000603722 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
TUBE1-206ENST00000603722 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
TUBE1-206ENST00000603722 KRTAP21-2Q3LI59 83 aa3.24□□□□□ -1.89
TUBE1-206ENST00000603722 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
TUBE1-206ENST00000603722 PHGR1C9JFL3 82 aa3.13□□□□□ -1.91
TUBE1-206ENST00000603722 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
TUBE1-206ENST00000603722 INE1O15225 51 aa2.59□□□□□ -1.99
TUBE1-206ENST00000603722 PRM1P04553 51 aa2.58□□□□□ -2
TUBE1-206ENST00000603722 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
TUBE1-206ENST00000603722 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms