RNA–Protein interactions for RNA: ENST00000602960.1

PRAMEF20-202, Transcript of PRAME family member 20, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRAMEF20, Length 1,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20-202ENST00000602960 PRO0628Q9UI54 55 aa4.57□□□□□ -1.68
PRAMEF20-202ENST00000602960 KRTAP12-3P60328 96 aa4.53□□□□□ -1.68
PRAMEF20-202ENST00000602960 KRTAP19-3Q7Z4W3 81 aa4.51□□□□□ -1.69
PRAMEF20-202ENST00000602960 PP632Q6XCG6 107 aa4.51□□□□□ -1.69
PRAMEF20-202ENST00000602960 SPRR2DP22532 72 aa4.48□□□□□ -1.69
PRAMEF20-202ENST00000602960 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
PRAMEF20-202ENST00000602960 MT1LQ93083 61 aa4.46□□□□□ -1.69
PRAMEF20-202ENST00000602960 MT1GP13640 62 aa4.46□□□□□ -1.7
PRAMEF20-202ENST00000602960 PMAIP1Q13794 54 aa4.46□□□□□ -1.7
PRAMEF20-202ENST00000602960 KRTAP20-1Q3LI63 56 aa4.45□□□□□ -1.7
PRAMEF20-202ENST00000602960 KRTAP2-3P0C7H8 128 aa4.4□□□□□ -1.71
PRAMEF20-202ENST00000602960 KRTAP2-4Q9BYR9 128 aa4.4□□□□□ -1.71
PRAMEF20-202ENST00000602960 MT1MQ8N339 61 aa4.36□□□□□ -1.71
PRAMEF20-202ENST00000602960 KRTAP15-1Q3LI76 137 aa4.35□□□□□ -1.71
PRAMEF20-202ENST00000602960 KRTAP19-4Q3LI73 84 aa4.33□□□□□ -1.72
PRAMEF20-202ENST00000602960 LCE3BQ5TA77 95 aa4.33□□□□□ -1.72
PRAMEF20-202ENST00000602960 DSTQ03001 7570 aaKnown RBP4.29□□□□□ -1.72
PRAMEF20-202ENST00000602960 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
PRAMEF20-202ENST00000602960 KRTAP2-1Q9BYU5 128 aa4.29□□□□□ -1.72
PRAMEF20-202ENST00000602960 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
PRAMEF20-202ENST00000602960 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
PRAMEF20-202ENST00000602960 KRTAP4-3Q9BYR4 195 aa4.23□□□□□ -1.73
PRAMEF20-202ENST00000602960 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
PRAMEF20-202ENST00000602960 PRAC1Q96KF2 57 aa4.19□□□□□ -1.74
PRAMEF20-202ENST00000602960 LOC100996750A0A140TA64 210 aa4.01□□□□□ -1.77
PRAMEF20-202ENST00000602960 LCE4AQ5TA78 99 aa4□□□□□ -1.77
PRAMEF20-202ENST00000602960 KRTAP5-4Q6L8H1 288 aa3.98□□□□□ -1.77
PRAMEF20-202ENST00000602960 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
PRAMEF20-202ENST00000602960 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
PRAMEF20-202ENST00000602960 KRTAP4-9Q9BYQ8 210 aa3.93□□□□□ -1.78
PRAMEF20-202ENST00000602960 MT4P47944 62 aa3.89□□□□□ -1.79
PRAMEF20-202ENST00000602960 LCE1DQ5T752 114 aa3.89□□□□□ -1.79
PRAMEF20-202ENST00000602960 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.8
PRAMEF20-202ENST00000602960 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
PRAMEF20-202ENST00000602960 KRTAP4-6Q9BYQ5 205 aa3.81□□□□□ -1.8
PRAMEF20-202ENST00000602960 MT1AP04731 61 aa3.8□□□□□ -1.8
PRAMEF20-202ENST00000602960 KRTAP12-4P60329 112 aa3.8□□□□□ -1.8
PRAMEF20-202ENST00000602960 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
PRAMEF20-202ENST00000602960 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
PRAMEF20-202ENST00000602960 SYNE1Q8NF91 8797 aaKnown RBP3.78□□□□□ -1.8
PRAMEF20-202ENST00000602960 KRTAP4-12Q9BQ66 201 aa3.76□□□□□ -1.81
PRAMEF20-202ENST00000602960 KRTAP6-1Q3LI64 71 aa3.75□□□□□ -1.81
PRAMEF20-202ENST00000602960 KRTAP20-2Q3LI61 65 aa3.73□□□□□ -1.81
PRAMEF20-202ENST00000602960 GPR98Q8WXG9 6306 aa3.68□□□□□ -1.82
PRAMEF20-202ENST00000602960 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
PRAMEF20-202ENST00000602960 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
PRAMEF20-202ENST00000602960 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
PRAMEF20-202ENST00000602960 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
PRAMEF20-202ENST00000602960 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
PRAMEF20-202ENST00000602960 AHNAK2Q8IVF2 5795 aa3.51□□□□□ -1.85
PRAMEF20-202ENST00000602960 MT3P25713 68 aa3.48□□□□□ -1.85
PRAMEF20-202ENST00000602960 KRTAP5-10Q6L8G5 202 aa3.45□□□□□ -1.86
PRAMEF20-202ENST00000602960 KRTAP5-7Q6L8G8 165 aa3.32□□□□□ -1.88
PRAMEF20-202ENST00000602960 KRTAP4-11Q9BYQ6 195 aa3.32□□□□□ -1.88
PRAMEF20-202ENST00000602960 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
PRAMEF20-202ENST00000602960 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
PRAMEF20-202ENST00000602960 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
PRAMEF20-202ENST00000602960 KRTAP5-1Q6L8H4 278 aa3.12□□□□□ -1.91
PRAMEF20-202ENST00000602960 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
PRAMEF20-202ENST00000602960 LCE1FQ5T754 118 aa3.01□□□□□ -1.93
PRAMEF20-202ENST00000602960 MUC5ACP98088 5654 aa2.98□□□□□ -1.93
PRAMEF20-202ENST00000602960 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
PRAMEF20-202ENST00000602960 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
PRAMEF20-202ENST00000602960 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
PRAMEF20-202ENST00000602960 LCE1BQ5T7P3 118 aa2.89□□□□□ -1.95
PRAMEF20-202ENST00000602960 MUC5BQ9HC84 5762 aaPredicted RBP2.88□□□□□ -1.95
PRAMEF20-202ENST00000602960 AHNAKQ09666 5890 aaKnown RBP2.84□□□□□ -1.95
PRAMEF20-202ENST00000602960 INE1O15225 51 aa2.73□□□□□ -1.97
PRAMEF20-202ENST00000602960 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.68□□□□□ -1.98
PRAMEF20-202ENST00000602960 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
PRAMEF20-202ENST00000602960 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
PRAMEF20-202ENST00000602960 PRM1P04553 51 aa2.41□□□□□ -2.02
PRAMEF20-202ENST00000602960 PHGR1C9JFL3 82 aa2.22□□□□□ -2.05
PRAMEF20-202ENST00000602960 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
PRAMEF20-202ENST00000602960 MUC19Q7Z5P9 8384 aa2.01□□□□□ -2.09
PRAMEF20-202ENST00000602960 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
PRAMEF20-202ENST00000602960 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 49.4 ms