RNA–Protein interactions for RNA: ENST00000602861.5

HCG18-248, Transcript of HLA complex group 18, humanhuman

TSL 3

Gene HCG18, Length 372 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-248ENST00000602861 FCGBPQ9Y6R7 5405 aaPredicted RBP3.51□□□□□ -1.85
HCG18-248ENST00000602861 KRTAP10-10P60014 251 aa3.51□□□□□ -1.85
HCG18-248ENST00000602861 PLAC4Q8WY50 150 aa3.51□□□□□ -1.85
HCG18-248ENST00000602861 KRTAP10-5P60370 271 aa3.49□□□□□ -1.85
HCG18-248ENST00000602861 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
HCG18-248ENST00000602861 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.85
HCG18-248ENST00000602861 SYNE2Q8WXH0 6885 aaKnown RBP3.45□□□□□ -1.86
HCG18-248ENST00000602861 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
HCG18-248ENST00000602861 KRTAP19-6Q3LI70 58 aa3.42□□□□□ -1.86
HCG18-248ENST00000602861 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
HCG18-248ENST00000602861 TNP1P09430 55 aa3.37□□□□□ -1.87
HCG18-248ENST00000602861 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
HCG18-248ENST00000602861 SPRR5A0A1B0GTR4 108 aa3.35□□□□□ -1.87
HCG18-248ENST00000602861 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
HCG18-248ENST00000602861 KRTAP5-9P26371 169 aa3.33□□□□□ -1.88
HCG18-248ENST00000602861 SPRR2GQ9BYE4 73 aa3.33□□□□□ -1.88
HCG18-248ENST00000602861 LCE3EQ5T5B0 92 aa3.31□□□□□ -1.88
HCG18-248ENST00000602861 KRTAP5-4Q6L8H1 288 aa3.3□□□□□ -1.88
HCG18-248ENST00000602861 NEBP20929 6669 aa3.29□□□□□ -1.88
HCG18-248ENST00000602861 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
HCG18-248ENST00000602861 LCE3AQ5TA76 89 aa3.22□□□□□ -1.89
HCG18-248ENST00000602861 KRTAP19-8Q3LI54 63 aa3.21□□□□□ -1.9
HCG18-248ENST00000602861 KRTAP20-1Q3LI63 56 aa3.2□□□□□ -1.9
HCG18-248ENST00000602861 MT1BP07438 61 aa3.18□□□□□ -1.9
HCG18-248ENST00000602861 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
HCG18-248ENST00000602861 KRTAP8-1Q8IUC2 63 aa3.17□□□□□ -1.9
HCG18-248ENST00000602861 MUC12Q9UKN1 5478 aa3.14□□□□□ -1.91
HCG18-248ENST00000602861 MT1XP80297 61 aa3.13□□□□□ -1.91
HCG18-248ENST00000602861 KMT2DO14686 5537 aa3.09□□□□□ -1.91
HCG18-248ENST00000602861 MDN1Q9NU22 5596 aa3.06□□□□□ -1.92
HCG18-248ENST00000602861 KRTAP2-3P0C7H8 128 aa3.06□□□□□ -1.92
HCG18-248ENST00000602861 KRTAP2-4Q9BYR9 128 aa3.06□□□□□ -1.92
HCG18-248ENST00000602861 KRTAP12-3P60328 96 aa3.05□□□□□ -1.92
HCG18-248ENST00000602861 SPRR2FQ96RM1 72 aa3.03□□□□□ -1.92
HCG18-248ENST00000602861 SPRR2EP22531 72 aa3.02□□□□□ -1.93
HCG18-248ENST00000602861 SPRR2BP35325 72 aa3.02□□□□□ -1.93
HCG18-248ENST00000602861 SPRR2AP35326 72 aa3.02□□□□□ -1.93
HCG18-248ENST00000602861 OBSCNQ5VST9 7968 aa3□□□□□ -1.93
HCG18-248ENST00000602861 PRO2289Q9P1D8 64 aa2.98□□□□□ -1.93
HCG18-248ENST00000602861 INE1O15225 51 aa2.95□□□□□ -1.94
HCG18-248ENST00000602861 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
HCG18-248ENST00000602861 SPRR2DP22532 72 aa2.93□□□□□ -1.94
HCG18-248ENST00000602861 KRTAP19-5Q3LI72 72 aa2.92□□□□□ -1.94
HCG18-248ENST00000602861 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
HCG18-248ENST00000602861 KRTAP4-3Q9BYR4 195 aa2.86□□□□□ -1.95
HCG18-248ENST00000602861 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
HCG18-248ENST00000602861 KRTAP19-7Q3SYF9 63 aa2.79□□□□□ -1.96
HCG18-248ENST00000602861 KRTAP5-2Q701N4 177 aa2.77□□□□□ -1.97
HCG18-248ENST00000602861 MT1LQ93083 61 aa2.73□□□□□ -1.97
HCG18-248ENST00000602861 MT1EP04732 61 aa2.71□□□□□ -1.98
HCG18-248ENST00000602861 DSTQ03001 7570 aaKnown RBP2.7□□□□□ -1.98
HCG18-248ENST00000602861 KRTAP19-3Q7Z4W3 81 aa2.63□□□□□ -1.99
HCG18-248ENST00000602861 HMCN1Q96RW7 5635 aa2.58□□□□□ -2
HCG18-248ENST00000602861 MT4P47944 62 aa2.57□□□□□ -2
HCG18-248ENST00000602861 MT1GP13640 62 aa2.54□□□□□ -2
HCG18-248ENST00000602861 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2
HCG18-248ENST00000602861 MT1MQ8N339 61 aa2.53□□□□□ -2
HCG18-248ENST00000602861 KRTAP5-10Q6L8G5 202 aa2.5□□□□□ -2.01
HCG18-248ENST00000602861 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
HCG18-248ENST00000602861 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
HCG18-248ENST00000602861 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
HCG18-248ENST00000602861 KRTAP12-4P60329 112 aa2.38□□□□□ -2.03
HCG18-248ENST00000602861 KRTAP20-2Q3LI61 65 aa2.35□□□□□ -2.03
HCG18-248ENST00000602861 MT1AP04731 61 aa2.32□□□□□ -2.04
HCG18-248ENST00000602861 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
HCG18-248ENST00000602861 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
HCG18-248ENST00000602861 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
HCG18-248ENST00000602861 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
HCG18-248ENST00000602861 SYNE1Q8NF91 8797 aaKnown RBP2.21□□□□□ -2.06
HCG18-248ENST00000602861 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
HCG18-248ENST00000602861 MUC5BQ9HC84 5762 aaPredicted RBP2.14□□□□□ -2.07
HCG18-248ENST00000602861 PRM1P04553 51 aa2.13□□□□□ -2.07
HCG18-248ENST00000602861 KRTAP6-2Q3LI66 62 aa2.07□□□□□ -2.08
HCG18-248ENST00000602861 MUC19Q7Z5P9 8384 aa1.96□□□□□ -2.1
HCG18-248ENST00000602861 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
HCG18-248ENST00000602861 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
HCG18-248ENST00000602861 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
HCG18-248ENST00000602861 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 10.9 ms