RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 DEFB105AQ8NG35 78 aa1.53□□□□□ -2.16
SGMS1-206ENST00000602565 FSIP2Q5CZC0 6907 aa1.53□□□□□ -2.17
SGMS1-206ENST00000602565 MT1HL1P0DM35 61 aa1.51□□□□□ -2.17
SGMS1-206ENST00000602565 SPRR1BP22528 89 aa1.51□□□□□ -2.17
SGMS1-206ENST00000602565 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
SGMS1-206ENST00000602565 TNXBP22105 4242 aa1.49□□□□□ -2.17
SGMS1-206ENST00000602565 PRLHP81277 87 aa1.49□□□□□ -2.17
SGMS1-206ENST00000602565 S4R3F8 94 aa1.49□□□□□ -2.17
SGMS1-206ENST00000602565 SPART-AS1P0CW21 52 aa1.47□□□□□ -2.17
SGMS1-206ENST00000602565 APELAP0DMC3 54 aa1.47□□□□□ -2.17
SGMS1-206ENST00000602565 HTN3P15516 51 aa1.47□□□□□ -2.17
SGMS1-206ENST00000602565 LPAP08519 4548 aa1.47□□□□□ -2.17
SGMS1-206ENST00000602565 DNAH8Q96JB1 4490 aa1.45□□□□□ -2.18
SGMS1-206ENST00000602565 KRTAP2-3P0C7H8 128 aa1.44□□□□□ -2.18
SGMS1-206ENST00000602565 KRTAP2-4Q9BYR9 128 aa1.44□□□□□ -2.18
SGMS1-206ENST00000602565 KRTAP2-1Q9BYU5 128 aa1.44□□□□□ -2.18
SGMS1-206ENST00000602565 NOP10Q9NPE3 64 aaKnown RBP1.44□□□□□ -2.18
SGMS1-206ENST00000602565 DEFB1P60022 68 aa1.43□□□□□ -2.18
SGMS1-206ENST00000602565 SPINK1P00995 79 aa1.42□□□□□ -2.18
SGMS1-206ENST00000602565 KRTAP5-10Q6L8G5 202 aa1.42□□□□□ -2.18
SGMS1-206ENST00000602565 RHPN1-AS1Q9BWJ2 59 aa1.42□□□□□ -2.18
SGMS1-206ENST00000602565 SSPOA2VEC9 5147 aa1.42□□□□□ -2.18
SGMS1-206ENST00000602565 USH2AO75445 5202 aa1.4□□□□□ -2.19
SGMS1-206ENST00000602565 H3BNG1 76 aa1.39□□□□□ -2.19
SGMS1-206ENST00000602565 A0A096LPF7 62 aa1.38□□□□□ -2.19
SGMS1-206ENST00000602565 MUC17Q685J3 4493 aa1.35□□□□□ -2.19
SGMS1-206ENST00000602565 M0QZ58 72 aa1.35□□□□□ -2.19
SGMS1-206ENST00000602565 HTN1P15515 57 aa1.35□□□□□ -2.19
SGMS1-206ENST00000602565 KRTAP20-1Q3LI63 56 aa1.35□□□□□ -2.19
SGMS1-206ENST00000602565 LINC01556Q5JQF7 62 aa1.33□□□□□ -2.2
SGMS1-206ENST00000602565 MT1HP80294 61 aa1.31□□□□□ -2.2
SGMS1-206ENST00000602565 SYNE2Q8WXH0 6885 aaKnown RBP1.31□□□□□ -2.2
SGMS1-206ENST00000602565 MACF1Q9UPN3 7388 aaKnown RBP1.3□□□□□ -2.2
SGMS1-206ENST00000602565 MUC12Q9UKN1 5478 aa1.3□□□□□ -2.2
SGMS1-206ENST00000602565 M0R2T5 61 aa1.28□□□□□ -2.2
SGMS1-206ENST00000602565 KRTAP19-2Q3LHN2 52 aa1.27□□□□□ -2.21
SGMS1-206ENST00000602565 KMT2DO14686 5537 aa1.26□□□□□ -2.21
SGMS1-206ENST00000602565 NEBP20929 6669 aa1.25□□□□□ -2.21
SGMS1-206ENST00000602565 A0A096LNI7 61 aa1.22□□□□□ -2.21
SGMS1-206ENST00000602565 KRTAP19-6Q3LI70 58 aa1.22□□□□□ -2.21
SGMS1-206ENST00000602565 MDN1Q9NU22 5596 aa1.21□□□□□ -2.22
SGMS1-206ENST00000602565 FLGP20930 4061 aaPredicted RBP1.2□□□□□ -2.22
SGMS1-206ENST00000602565 GPR98Q8WXG9 6306 aa1.19□□□□□ -2.22
SGMS1-206ENST00000602565 TNP1P09430 55 aa1.18□□□□□ -2.22
SGMS1-206ENST00000602565 MT2AP02795 61 aa1.15□□□□□ -2.22
SGMS1-206ENST00000602565 MT1FP04733 61 aa1.15□□□□□ -2.23
SGMS1-206ENST00000602565 C9orf92A6NGG3 77 aa1.14□□□□□ -2.23
SGMS1-206ENST00000602565 SPRR2EP22531 72 aa1.12□□□□□ -2.23
SGMS1-206ENST00000602565 SPRR2BP35325 72 aa1.12□□□□□ -2.23
SGMS1-206ENST00000602565 SPRR2AP35326 72 aa1.12□□□□□ -2.23
SGMS1-206ENST00000602565 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
SGMS1-206ENST00000602565 RPS29P62273 56 aaKnown RBP1.1□□□□□ -2.23
SGMS1-206ENST00000602565 SPRR2DP22532 72 aa1.09□□□□□ -2.24
SGMS1-206ENST00000602565 AHNAK2Q8IVF2 5795 aa1.07□□□□□ -2.24
SGMS1-206ENST00000602565 SPRR2FQ96RM1 72 aa1.07□□□□□ -2.24
SGMS1-206ENST00000602565 KRTAP8-1Q8IUC2 63 aa1.06□□□□□ -2.24
SGMS1-206ENST00000602565 DSTQ03001 7570 aaKnown RBP1□□□□□ -2.25
SGMS1-206ENST00000602565 MT1BP07438 61 aa0.98□□□□□ -2.25
SGMS1-206ENST00000602565 MT4P47944 62 aa0.96□□□□□ -2.26
SGMS1-206ENST00000602565 AHNAKQ09666 5890 aaKnown RBP0.95□□□□□ -2.26
SGMS1-206ENST00000602565 PRM1P04553 51 aa0.95□□□□□ -2.26
SGMS1-206ENST00000602565 KRTAP19-8Q3LI54 63 aa0.95□□□□□ -2.26
SGMS1-206ENST00000602565 SYNE1Q8NF91 8797 aaKnown RBP0.93□□□□□ -2.26
SGMS1-206ENST00000602565 SPRR2GQ9BYE4 73 aa0.91□□□□□ -2.26
SGMS1-206ENST00000602565 MUC5BQ9HC84 5762 aaPredicted RBP0.91□□□□□ -2.26
SGMS1-206ENST00000602565 KRTAP19-5Q3LI72 72 aa0.89□□□□□ -2.27
SGMS1-206ENST00000602565 MUC5ACP98088 5654 aa0.89□□□□□ -2.27
SGMS1-206ENST00000602565 MT1AP04731 61 aa0.88□□□□□ -2.27
SGMS1-206ENST00000602565 MT1XP80297 61 aa0.87□□□□□ -2.27
SGMS1-206ENST00000602565 KRTAP20-2Q3LI61 65 aa0.85□□□□□ -2.27
SGMS1-206ENST00000602565 PHGR1C9JFL3 82 aa0.8□□□□□ -2.28
SGMS1-206ENST00000602565 MT1EP04732 61 aa0.79□□□□□ -2.28
SGMS1-206ENST00000602565 MT1GP13640 62 aa0.78□□□□□ -2.28
SGMS1-206ENST00000602565 KRTAP19-7Q3SYF9 63 aa0.78□□□□□ -2.28
SGMS1-206ENST00000602565 KRTAP6-2Q3LI66 62 aa0.77□□□□□ -2.29
SGMS1-206ENST00000602565 MT1MQ8N339 61 aa0.77□□□□□ -2.29
SGMS1-206ENST00000602565 MT1LQ93083 61 aa0.71□□□□□ -2.3
SGMS1-206ENST00000602565 KRTAP6-1Q3LI64 71 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 55.5 ms