RNA–Protein interactions for RNA: ENST00000602516.1

HCG18-244, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 2,890 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-244ENST00000602516 LCE3CQ5T5A8 94 aa3.05□□□□□ -1.92
HCG18-244ENST00000602516 TNP1P09430 55 aa3.04□□□□□ -1.92
HCG18-244ENST00000602516 KRTAP19-8Q3LI54 63 aa3.02□□□□□ -1.93
HCG18-244ENST00000602516 MT3P25713 68 aa3□□□□□ -1.93
HCG18-244ENST00000602516 MT1BP07438 61 aa2.97□□□□□ -1.93
HCG18-244ENST00000602516 CRCT1Q9UGL9 99 aa2.95□□□□□ -1.94
HCG18-244ENST00000602516 KRTAP10-5P60370 271 aa2.93□□□□□ -1.94
HCG18-244ENST00000602516 MT1XP80297 61 aa2.92□□□□□ -1.94
HCG18-244ENST00000602516 KRTAP10-12P60413 245 aa2.9□□□□□ -1.94
HCG18-244ENST00000602516 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
HCG18-244ENST00000602516 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
HCG18-244ENST00000602516 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
HCG18-244ENST00000602516 AHNAKQ09666 5890 aaKnown RBP2.88□□□□□ -1.95
HCG18-244ENST00000602516 FSIP2Q5CZC0 6907 aa2.88□□□□□ -1.95
HCG18-244ENST00000602516 USH2AO75445 5202 aa2.86□□□□□ -1.95
HCG18-244ENST00000602516 KRTAP8-1Q8IUC2 63 aa2.85□□□□□ -1.95
HCG18-244ENST00000602516 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
HCG18-244ENST00000602516 SSPOA2VEC9 5147 aa2.83□□□□□ -1.96
HCG18-244ENST00000602516 LCE3EQ5T5B0 92 aa2.82□□□□□ -1.96
HCG18-244ENST00000602516 NEBP20929 6669 aa2.82□□□□□ -1.96
HCG18-244ENST00000602516 KRTAP10-7P60409 375 aaPredicted RBP2.82□□□□□ -1.96
HCG18-244ENST00000602516 KRTAP12-3P60328 96 aa2.76□□□□□ -1.97
HCG18-244ENST00000602516 KRTAP19-6Q3LI70 58 aa2.75□□□□□ -1.97
HCG18-244ENST00000602516 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
HCG18-244ENST00000602516 FCGBPQ9Y6R7 5405 aaPredicted RBP2.73□□□□□ -1.97
HCG18-244ENST00000602516 KRTAP2-3P0C7H8 128 aa2.68□□□□□ -1.98
HCG18-244ENST00000602516 KRTAP12-4P60329 112 aa2.68□□□□□ -1.98
HCG18-244ENST00000602516 KRTAP2-4Q9BYR9 128 aa2.68□□□□□ -1.98
HCG18-244ENST00000602516 KRTAP2-1Q9BYU5 128 aa2.68□□□□□ -1.98
HCG18-244ENST00000602516 KRTAP19-5Q3LI72 72 aa2.68□□□□□ -1.98
HCG18-244ENST00000602516 KMT2DO14686 5537 aa2.66□□□□□ -1.98
HCG18-244ENST00000602516 MACF1Q9UPN3 7388 aaKnown RBP2.62□□□□□ -1.99
HCG18-244ENST00000602516 KRTAP19-7Q3SYF9 63 aa2.61□□□□□ -1.99
HCG18-244ENST00000602516 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
HCG18-244ENST00000602516 SYNE2Q8WXH0 6885 aaKnown RBP2.56□□□□□ -2
HCG18-244ENST00000602516 MT1EP04732 61 aa2.54□□□□□ -2
HCG18-244ENST00000602516 MT1LQ93083 61 aa2.52□□□□□ -2.01
HCG18-244ENST00000602516 KRTAP9-6A8MVA2 160 aa2.5□□□□□ -2.01
HCG18-244ENST00000602516 KRTAP5-9P26371 169 aa2.47□□□□□ -2.01
HCG18-244ENST00000602516 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
HCG18-244ENST00000602516 MUC12Q9UKN1 5478 aa2.44□□□□□ -2.02
HCG18-244ENST00000602516 LCE3DQ9BYE3 92 aa2.42□□□□□ -2.02
HCG18-244ENST00000602516 SPRR2FQ96RM1 72 aa2.41□□□□□ -2.02
HCG18-244ENST00000602516 OBSCNQ5VST9 7968 aa2.41□□□□□ -2.02
HCG18-244ENST00000602516 KRTAP19-3Q7Z4W3 81 aa2.39□□□□□ -2.03
HCG18-244ENST00000602516 MT1GP13640 62 aa2.39□□□□□ -2.03
HCG18-244ENST00000602516 MDN1Q9NU22 5596 aa2.38□□□□□ -2.03
HCG18-244ENST00000602516 MT1MQ8N339 61 aa2.37□□□□□ -2.03
HCG18-244ENST00000602516 SPRR2EP22531 72 aa2.35□□□□□ -2.03
HCG18-244ENST00000602516 SPRR2BP35325 72 aa2.35□□□□□ -2.03
HCG18-244ENST00000602516 SPRR2AP35326 72 aa2.35□□□□□ -2.03
HCG18-244ENST00000602516 KRTAP4-3Q9BYR4 195 aa2.35□□□□□ -2.03
HCG18-244ENST00000602516 PRM1P04553 51 aa2.33□□□□□ -2.04
HCG18-244ENST00000602516 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
HCG18-244ENST00000602516 SPRR2DP22532 72 aa2.28□□□□□ -2.04
HCG18-244ENST00000602516 SYNE1Q8NF91 8797 aaKnown RBP2.23□□□□□ -2.05
HCG18-244ENST00000602516 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
HCG18-244ENST00000602516 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
HCG18-244ENST00000602516 DSTQ03001 7570 aaKnown RBP2.21□□□□□ -2.06
HCG18-244ENST00000602516 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
HCG18-244ENST00000602516 KRTAP5-1Q6L8H4 278 aa2.15□□□□□ -2.07
HCG18-244ENST00000602516 MT1AP04731 61 aa2.13□□□□□ -2.07
HCG18-244ENST00000602516 KRTAP6-1Q3LI64 71 aa2.12□□□□□ -2.07
HCG18-244ENST00000602516 KRTAP5-4Q6L8H1 288 aa2.01□□□□□ -2.09
HCG18-244ENST00000602516 KRTAP4-4Q9BYR3 166 aa1.99□□□□□ -2.09
HCG18-244ENST00000602516 KRTAP6-2Q3LI66 62 aa1.99□□□□□ -2.09
HCG18-244ENST00000602516 MT4P47944 62 aa1.98□□□□□ -2.09
HCG18-244ENST00000602516 MUC19Q7Z5P9 8384 aa1.95□□□□□ -2.1
HCG18-244ENST00000602516 KRTAP20-2Q3LI61 65 aa1.88□□□□□ -2.11
HCG18-244ENST00000602516 LCE1CQ5T751 118 aa1.86□□□□□ -2.11
HCG18-244ENST00000602516 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
HCG18-244ENST00000602516 KRTAP5-2Q701N4 177 aa1.8□□□□□ -2.12
HCG18-244ENST00000602516 KRTAP5-8O75690 187 aa1.64□□□□□ -2.15
HCG18-244ENST00000602516 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
HCG18-244ENST00000602516 KRTAP21-2Q3LI59 83 aa1.4□□□□□ -2.19
HCG18-244ENST00000602516 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
HCG18-244ENST00000602516 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 71.9 ms