RNA–Protein interactions for RNA: ENST00000602503.1

KDM1A-206, Transcript of lysine demethylase 1A, humanhuman

Gene KDM1A, Length 2,810 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-206ENST00000602503 KRTAP12-3P60328 96 aa3.01□□□□□ -1.93
KDM1A-206ENST00000602503 MT1FP04733 61 aa3□□□□□ -1.93
KDM1A-206ENST00000602503 MT2AP02795 61 aa2.98□□□□□ -1.93
KDM1A-206ENST00000602503 KRTAP19-8Q3LI54 63 aa2.97□□□□□ -1.93
KDM1A-206ENST00000602503 KRTAP10-5P60370 271 aa2.93□□□□□ -1.94
KDM1A-206ENST00000602503 KMT2DO14686 5537 aa2.92□□□□□ -1.94
KDM1A-206ENST00000602503 SSPOA2VEC9 5147 aa2.89□□□□□ -1.95
KDM1A-206ENST00000602503 KRTAP2-3P0C7H8 128 aa2.88□□□□□ -1.95
KDM1A-206ENST00000602503 KRTAP2-4Q9BYR9 128 aa2.88□□□□□ -1.95
KDM1A-206ENST00000602503 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
KDM1A-206ENST00000602503 LCE3CQ5T5A8 94 aa2.87□□□□□ -1.95
KDM1A-206ENST00000602503 MT1BP07438 61 aa2.84□□□□□ -1.95
KDM1A-206ENST00000602503 MT1XP80297 61 aa2.83□□□□□ -1.96
KDM1A-206ENST00000602503 KRTAP2-2Q9BYT5 123 aa2.82□□□□□ -1.96
KDM1A-206ENST00000602503 KRTAP10-7P60409 375 aaPredicted RBP2.75□□□□□ -1.97
KDM1A-206ENST00000602503 MT3P25713 68 aa2.74□□□□□ -1.97
KDM1A-206ENST00000602503 FCGBPQ9Y6R7 5405 aaPredicted RBP2.72□□□□□ -1.97
KDM1A-206ENST00000602503 KRTAP9-6A8MVA2 160 aa2.68□□□□□ -1.98
KDM1A-206ENST00000602503 KRTAP19-5Q3LI72 72 aa2.68□□□□□ -1.98
KDM1A-206ENST00000602503 SYNE2Q8WXH0 6885 aaKnown RBP2.67□□□□□ -1.98
KDM1A-206ENST00000602503 MUC12Q9UKN1 5478 aa2.66□□□□□ -1.98
KDM1A-206ENST00000602503 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
KDM1A-206ENST00000602503 MACF1Q9UPN3 7388 aaKnown RBP2.65□□□□□ -1.98
KDM1A-206ENST00000602503 KRTAP12-4P60329 112 aa2.62□□□□□ -1.99
KDM1A-206ENST00000602503 LCE1FQ5T754 118 aa2.62□□□□□ -1.99
KDM1A-206ENST00000602503 DSTQ03001 7570 aaKnown RBP2.56□□□□□ -2
KDM1A-206ENST00000602503 MDN1Q9NU22 5596 aa2.55□□□□□ -2
KDM1A-206ENST00000602503 LCE1EQ5T753 118 aa2.55□□□□□ -2
KDM1A-206ENST00000602503 KRTAP19-7Q3SYF9 63 aa2.52□□□□□ -2.01
KDM1A-206ENST00000602503 KRTAP19-6Q3LI70 58 aa2.51□□□□□ -2.01
KDM1A-206ENST00000602503 CRCT1Q9UGL9 99 aa2.51□□□□□ -2.01
KDM1A-206ENST00000602503 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
KDM1A-206ENST00000602503 MT1LQ93083 61 aa2.47□□□□□ -2.01
KDM1A-206ENST00000602503 MT1EP04732 61 aa2.46□□□□□ -2.01
KDM1A-206ENST00000602503 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.43□□□□□ -2.02
KDM1A-206ENST00000602503 KRTAP6-3Q3LI67 103 aa2.41□□□□□ -2.02
KDM1A-206ENST00000602503 SPRR2FQ96RM1 72 aa2.41□□□□□ -2.02
KDM1A-206ENST00000602503 MT1AP04731 61 aa2.39□□□□□ -2.03
KDM1A-206ENST00000602503 KRTAP4-3Q9BYR4 195 aa2.38□□□□□ -2.03
KDM1A-206ENST00000602503 PRM1P04553 51 aa2.35□□□□□ -2.03
KDM1A-206ENST00000602503 MT1GP13640 62 aa2.34□□□□□ -2.03
KDM1A-206ENST00000602503 LCE3EQ5T5B0 92 aa2.32□□□□□ -2.04
KDM1A-206ENST00000602503 KRTAP19-3Q7Z4W3 81 aa2.32□□□□□ -2.04
KDM1A-206ENST00000602503 MT1MQ8N339 61 aa2.3□□□□□ -2.04
KDM1A-206ENST00000602503 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
KDM1A-206ENST00000602503 SYNE1Q8NF91 8797 aaKnown RBP2.29□□□□□ -2.04
KDM1A-206ENST00000602503 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
KDM1A-206ENST00000602503 OBSCNQ5VST9 7968 aa2.26□□□□□ -2.05
KDM1A-206ENST00000602503 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
KDM1A-206ENST00000602503 SPRR2EP22531 72 aa2.25□□□□□ -2.05
KDM1A-206ENST00000602503 SPRR2BP35325 72 aa2.25□□□□□ -2.05
KDM1A-206ENST00000602503 SPRR2AP35326 72 aa2.25□□□□□ -2.05
KDM1A-206ENST00000602503 KRTAP5-9P26371 169 aa2.18□□□□□ -2.06
KDM1A-206ENST00000602503 NEBP20929 6669 aa2.16□□□□□ -2.06
KDM1A-206ENST00000602503 SPRR2DP22532 72 aa2.15□□□□□ -2.07
KDM1A-206ENST00000602503 KRTAP6-2Q3LI66 62 aa2.13□□□□□ -2.07
KDM1A-206ENST00000602503 KRTAP5-1Q6L8H4 278 aa2.12□□□□□ -2.07
KDM1A-206ENST00000602503 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
KDM1A-206ENST00000602503 KRTAP6-1Q3LI64 71 aa2.04□□□□□ -2.08
KDM1A-206ENST00000602503 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
KDM1A-206ENST00000602503 KRTAP5-4Q6L8H1 288 aa2.01□□□□□ -2.09
KDM1A-206ENST00000602503 KRTAP20-1Q3LI63 56 aa2□□□□□ -2.09
KDM1A-206ENST00000602503 MT4P47944 62 aa1.99□□□□□ -2.09
KDM1A-206ENST00000602503 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
KDM1A-206ENST00000602503 KRTAP20-2Q3LI61 65 aa1.78□□□□□ -2.12
KDM1A-206ENST00000602503 KRTAP5-2Q701N4 177 aa1.72□□□□□ -2.13
KDM1A-206ENST00000602503 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
KDM1A-206ENST00000602503 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
KDM1A-206ENST00000602503 LCE1CQ5T751 118 aa1.68□□□□□ -2.14
KDM1A-206ENST00000602503 LCE1BQ5T7P3 118 aa1.68□□□□□ -2.14
KDM1A-206ENST00000602503 AHNAK2Q8IVF2 5795 aa1.67□□□□□ -2.14
KDM1A-206ENST00000602503 MUC5ACP98088 5654 aa1.66□□□□□ -2.14
KDM1A-206ENST00000602503 KRTAP5-10Q6L8G5 202 aa1.62□□□□□ -2.15
KDM1A-206ENST00000602503 KRTAP21-1Q3LI58 79 aa1.58□□□□□ -2.16
KDM1A-206ENST00000602503 KRTAP5-8O75690 187 aa1.48□□□□□ -2.17
KDM1A-206ENST00000602503 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
KDM1A-206ENST00000602503 PHGR1C9JFL3 82 aa1.09□□□□□ -2.24
KDM1A-206ENST00000602503 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 671.9 ms