RNA–Protein interactions for RNA: ENST00000602001.1

CRX-205, Transcript of cone-rod homeobox, humanhuman

TSL 5

Gene CRX, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-205ENST00000602001 CYSTM1Q9H1C7 97 aa4.41□□□□□ -1.7
CRX-205ENST00000602001 MT4P47944 62 aa4.38□□□□□ -1.71
CRX-205ENST00000602001 COA5Q86WW8 74 aa4.38□□□□□ -1.71
CRX-205ENST00000602001 SPINT4Q6UDR6 99 aa4.37□□□□□ -1.71
CRX-205ENST00000602001 HMCN1Q96RW7 5635 aa4.37□□□□□ -1.71
CRX-205ENST00000602001 MT1MQ8N339 61 aa4.36□□□□□ -1.71
CRX-205ENST00000602001 KRTAP12-1P59990 96 aa4.35□□□□□ -1.71
CRX-205ENST00000602001 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
CRX-205ENST00000602001 MT1GP13640 62 aa4.34□□□□□ -1.71
CRX-205ENST00000602001 MT1LQ93083 61 aa4.33□□□□□ -1.72
CRX-205ENST00000602001 SERP1Q9Y6X1 66 aa4.33□□□□□ -1.72
CRX-205ENST00000602001 AHNAK2Q8IVF2 5795 aa4.31□□□□□ -1.72
CRX-205ENST00000602001 SERP2Q8N6R1 65 aa4.31□□□□□ -1.72
CRX-205ENST00000602001 A0A1B0GU33 70 aa4.3□□□□□ -1.72
CRX-205ENST00000602001 A8MU10 97 aa4.27□□□□□ -1.73
CRX-205ENST00000602001 LCE3AQ5TA76 89 aa4.27□□□□□ -1.73
CRX-205ENST00000602001 KRTAP4-6Q9BYQ5 205 aa4.27□□□□□ -1.73
CRX-205ENST00000602001 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
CRX-205ENST00000602001 KRTAP4-7Q9BYR0 210 aa4.26□□□□□ -1.73
CRX-205ENST00000602001 ROMO1P60602 79 aa4.25□□□□□ -1.73
CRX-205ENST00000602001 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
CRX-205ENST00000602001 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
CRX-205ENST00000602001 PP632Q6XCG6 107 aa4.23□□□□□ -1.73
CRX-205ENST00000602001 KRTAP5-4Q6L8H1 288 aa4.22□□□□□ -1.73
CRX-205ENST00000602001 KRTAP5-10Q6L8G5 202 aa4.18□□□□□ -1.74
CRX-205ENST00000602001 KRTAP9-9Q9BYP9 154 aa4.18□□□□□ -1.74
CRX-205ENST00000602001 H7BZZ5 65 aa4.16□□□□□ -1.74
CRX-205ENST00000602001 COX7CP15954 63 aa4.13□□□□□ -1.75
CRX-205ENST00000602001 A0A1B0GU69 56 aa4.09□□□□□ -1.75
CRX-205ENST00000602001 ATP5EP56381 51 aaPredicted RBP4.08□□□□□ -1.76
CRX-205ENST00000602001 TNP1P09430 55 aa4.07□□□□□ -1.76
CRX-205ENST00000602001 KRTAP5-3Q6L8H2 238 aa4.05□□□□□ -1.76
CRX-205ENST00000602001 MIR22HGQ0VDD5 57 aa4.04□□□□□ -1.76
CRX-205ENST00000602001 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
CRX-205ENST00000602001 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
CRX-205ENST00000602001 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
CRX-205ENST00000602001 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
CRX-205ENST00000602001 SYNE1Q8NF91 8797 aaKnown RBP4□□□□□ -1.77
CRX-205ENST00000602001 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
CRX-205ENST00000602001 Q1T7F1 81 aa3.98□□□□□ -1.77
CRX-205ENST00000602001 MT3P25713 68 aa3.94□□□□□ -1.78
CRX-205ENST00000602001 SPRR5A0A1B0GTR4 108 aa3.88□□□□□ -1.79
CRX-205ENST00000602001 CDC42SE1Q9NRR8 79 aa3.85□□□□□ -1.79
CRX-205ENST00000602001 LINC01558Q9Y6Z2 57 aa3.85□□□□□ -1.79
CRX-205ENST00000602001 KRTAP12-4P60329 112 aa3.82□□□□□ -1.8
CRX-205ENST00000602001 PRR15LQ9BU68 103 aa3.81□□□□□ -1.8
CRX-205ENST00000602001 KRTAP4-12Q9BQ66 201 aa3.78□□□□□ -1.8
CRX-205ENST00000602001 UQCR11O14957 56 aa3.73□□□□□ -1.81
CRX-205ENST00000602001 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
CRX-205ENST00000602001 LCE1FQ5T754 118 aa3.71□□□□□ -1.82
CRX-205ENST00000602001 LCE3CQ5T5A8 94 aa3.7□□□□□ -1.82
CRX-205ENST00000602001 KRTAP4-11Q9BYQ6 195 aa3.69□□□□□ -1.82
CRX-205ENST00000602001 KRTAP5-2Q701N4 177 aa3.67□□□□□ -1.82
CRX-205ENST00000602001 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
CRX-205ENST00000602001 MT1AP04731 61 aa3.64□□□□□ -1.83
CRX-205ENST00000602001 OBSCNQ5VST9 7968 aa3.64□□□□□ -1.83
CRX-205ENST00000602001 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
CRX-205ENST00000602001 KRTAP6-2Q3LI66 62 aa3.57□□□□□ -1.84
CRX-205ENST00000602001 AHNAKQ09666 5890 aaKnown RBP3.56□□□□□ -1.84
CRX-205ENST00000602001 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.84
CRX-205ENST00000602001 INE1O15225 51 aa3.53□□□□□ -1.84
CRX-205ENST00000602001 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
CRX-205ENST00000602001 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
CRX-205ENST00000602001 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
CRX-205ENST00000602001 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
CRX-205ENST00000602001 KRTAP4-2Q9BYR5 136 aa3.02□□□□□ -1.93
CRX-205ENST00000602001 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
CRX-205ENST00000602001 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
CRX-205ENST00000602001 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
CRX-205ENST00000602001 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
CRX-205ENST00000602001 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
CRX-205ENST00000602001 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
CRX-205ENST00000602001 PHGR1C9JFL3 82 aa2.43□□□□□ -2.02
CRX-205ENST00000602001 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
CRX-205ENST00000602001 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
CRX-205ENST00000602001 PRM1P04553 51 aa1.78□□□□□ -2.12
CRX-205ENST00000602001 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
CRX-205ENST00000602001 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 62.9 ms