RNA–Protein interactions for RNA: ENST00000601668.5

PNPLA6-223, Transcript of patatin like phospholipase domain containing 6, human

TSL 3

Gene PNPLA6, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNPLA6-223	ENST00000601668	LCE3A	Q5TA76	89 aa		7.32	□□□□□ -1.24
PNPLA6-223	ENST00000601668		A6NED7	52 aa		7.29	□□□□□ -1.24
PNPLA6-223	ENST00000601668	MT1G	P13640	62 aa		7.17	□□□□□ -1.26
PNPLA6-223	ENST00000601668	MT1L	Q93083	61 aa		7.17	□□□□□ -1.26
PNPLA6-223	ENST00000601668	KRTAP25-1	Q3LHN0	102 aa		7.14	□□□□□ -1.27
PNPLA6-223	ENST00000601668	PP632	Q6XCG6	107 aa		7.1	□□□□□ -1.27
PNPLA6-223	ENST00000601668	MT1M	Q8N339	61 aa		7.1	□□□□□ -1.27
PNPLA6-223	ENST00000601668	DST	Q03001	7570 aa	Known RBP	7.08	□□□□□ -1.28
PNPLA6-223	ENST00000601668	KRTAP12-3	P60328	96 aa		7.04	□□□□□ -1.28
PNPLA6-223	ENST00000601668	KRTAP4-3	Q9BYR4	195 aa		6.98	□□□□□ -1.29
PNPLA6-223	ENST00000601668	CDC42SE1	Q9NRR8	79 aa		6.98	□□□□□ -1.29
PNPLA6-223	ENST00000601668	ROMO1	P60602	79 aa		6.87	□□□□□ -1.31
PNPLA6-223	ENST00000601668	KRTAP4-7	Q9BYR0	210 aa		6.87	□□□□□ -1.31
PNPLA6-223	ENST00000601668	KRTAP23-1	A1A580	65 aa		6.86	□□□□□ -1.31
PNPLA6-223	ENST00000601668	KRTAP4-9	Q9BYQ8	210 aa		6.85	□□□□□ -1.31
PNPLA6-223	ENST00000601668	LCE1D	Q5T752	114 aa		6.72	□□□□□ -1.33
PNPLA6-223	ENST00000601668	LCE4A	Q5TA78	99 aa		6.72	□□□□□ -1.33
PNPLA6-223	ENST00000601668	KRTAP5-4	Q6L8H1	288 aa		6.7	□□□□□ -1.34
PNPLA6-223	ENST00000601668	KRTAP15-1	Q3LI76	137 aa		6.66	□□□□□ -1.34
PNPLA6-223	ENST00000601668	MT4	P47944	62 aa		6.63	□□□□□ -1.35
PNPLA6-223	ENST00000601668	KRTAP19-4	Q3LI73	84 aa		6.61	□□□□□ -1.35
PNPLA6-223	ENST00000601668	HMCN1	Q96RW7	5635 aa		6.57	□□□□□ -1.36
PNPLA6-223	ENST00000601668	BRK1	Q8WUW1	75 aa		6.57	□□□□□ -1.36
PNPLA6-223	ENST00000601668	KRTAP5-5	Q701N2	237 aa	Predicted RBP	6.54	□□□□□ -1.36
PNPLA6-223	ENST00000601668	SVIP	Q8NHG7	77 aa		6.52	□□□□□ -1.37
PNPLA6-223	ENST00000601668	KRTAP4-6	Q9BYQ5	205 aa		6.52	□□□□□ -1.37
PNPLA6-223	ENST00000601668	LCE3C	Q5T5A8	94 aa		6.5	□□□□□ -1.37
PNPLA6-223	ENST00000601668	LOC100996750	A0A140TA64	210 aa		6.49	□□□□□ -1.37
PNPLA6-223	ENST00000601668	GPR98	Q8WXG9	6306 aa		6.47	□□□□□ -1.37
PNPLA6-223	ENST00000601668	AHNAK2	Q8IVF2	5795 aa		6.33	□□□□□ -1.4
PNPLA6-223	ENST00000601668	KRTAP20-2	Q3LI61	65 aa		6.29	□□□□□ -1.4
PNPLA6-223	ENST00000601668	SPRR5	A0A1B0GTR4	108 aa		6.25	□□□□□ -1.41
PNPLA6-223	ENST00000601668	PMAIP1	Q13794	54 aa		6.23	□□□□□ -1.41
PNPLA6-223	ENST00000601668	PRO0628	Q9UI54	55 aa		6.23	□□□□□ -1.41
PNPLA6-223	ENST00000601668	KRTAP12-4	P60329	112 aa		6.2	□□□□□ -1.42
PNPLA6-223	ENST00000601668	SYNE1	Q8NF91	8797 aa	Known RBP	6.19	□□□□□ -1.42
PNPLA6-223	ENST00000601668	KRTAP9-6	A8MVA2	160 aa		6.18	□□□□□ -1.42
PNPLA6-223	ENST00000601668	KRTAP5-10	Q6L8G5	202 aa		6.18	□□□□□ -1.42
PNPLA6-223	ENST00000601668	KRTAP5-3	Q6L8H2	238 aa		6.13	□□□□□ -1.43
PNPLA6-223	ENST00000601668	MT1A	P04731	61 aa		6.09	□□□□□ -1.43
PNPLA6-223	ENST00000601668	KRTAP6-1	Q3LI64	71 aa		6.08	□□□□□ -1.44
PNPLA6-223	ENST00000601668	KRTAP5-2	Q701N4	177 aa		5.91	□□□□□ -1.46
PNPLA6-223	ENST00000601668	KRTAP5-7	Q6L8G8	165 aa		5.9	□□□□□ -1.46
PNPLA6-223	ENST00000601668	PRAC1	Q96KF2	57 aa		5.86	□□□□□ -1.47
PNPLA6-223	ENST00000601668	KRTAP9-4	Q9BYQ2	154 aa		5.86	□□□□□ -1.47
PNPLA6-223	ENST00000601668	KTN1-AS1	Q86SY8	53 aa		5.82	□□□□□ -1.48
PNPLA6-223	ENST00000601668	KRTAP6-2	Q3LI66	62 aa		5.74	□□□□□ -1.49
PNPLA6-223	ENST00000601668	KRTAP4-11	Q9BYQ6	195 aa		5.69	□□□□□ -1.5
PNPLA6-223	ENST00000601668	KRTAP5-8	O75690	187 aa		5.53	□□□□□ -1.52
PNPLA6-223	ENST00000601668	MT3	P25713	68 aa		5.53	□□□□□ -1.52
PNPLA6-223	ENST00000601668	OBSCN	Q5VST9	7968 aa		5.37	□□□□□ -1.55
PNPLA6-223	ENST00000601668	KRTAP5-1	Q6L8H4	278 aa		5.27	□□□□□ -1.57
PNPLA6-223	ENST00000601668	MUC5AC	P98088	5654 aa		5.14	□□□□□ -1.59
PNPLA6-223	ENST00000601668	MUC5B	Q9HC84	5762 aa	Predicted RBP	5.14	□□□□□ -1.59
PNPLA6-223	ENST00000601668	KRTAP9-9	Q9BYP9	154 aa		5.13	□□□□□ -1.59
PNPLA6-223	ENST00000601668	AHNAK	Q09666	5890 aa	Known RBP	5.12	□□□□□ -1.59
PNPLA6-223	ENST00000601668	LCE1E	Q5T753	118 aa		5.05	□□□□□ -1.6
PNPLA6-223	ENST00000601668	LUZP6	Q538Z0	58 aa		4.98	□□□□□ -1.61
PNPLA6-223	ENST00000601668	KRTAP4-2	Q9BYR5	136 aa		4.83	□□□□□ -1.64
PNPLA6-223	ENST00000601668	LCE1B	Q5T7P3	118 aa		4.74	□□□□□ -1.65
PNPLA6-223	ENST00000601668	LCE3D	Q9BYE3	92 aa		4.74	□□□□□ -1.65
PNPLA6-223	ENST00000601668	LCE1C	Q5T751	118 aa		4.69	□□□□□ -1.66
PNPLA6-223	ENST00000601668	LCE3E	Q5T5B0	92 aa		4.51	□□□□□ -1.69
PNPLA6-223	ENST00000601668		H3BS24	57 aa		4.47	□□□□□ -1.69
PNPLA6-223	ENST00000601668	NDUFAF8	A1L188	74 aa		4.45	□□□□□ -1.7
PNPLA6-223	ENST00000601668	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.32	□□□□□ -1.72
PNPLA6-223	ENST00000601668	KRTAP4-12	Q9BQ66	201 aa		4.28	□□□□□ -1.72
PNPLA6-223	ENST00000601668	KRTAP5-11	Q6L8G4	156 aa		4.25	□□□□□ -1.73
PNPLA6-223	ENST00000601668		A0A0A0MQY5	61 aa		4.14	□□□□□ -1.75
PNPLA6-223	ENST00000601668	LCE1F	Q5T754	118 aa		4.05	□□□□□ -1.76
PNPLA6-223	ENST00000601668	KRTAP21-2	Q3LI59	83 aa		4.01	□□□□□ -1.77
PNPLA6-223	ENST00000601668	INE1	O15225	51 aa		3.83	□□□□□ -1.8
PNPLA6-223	ENST00000601668	PHGR1	C9JFL3	82 aa		3.67	□□□□□ -1.82
PNPLA6-223	ENST00000601668	KRTAP4-4	Q9BYR3	166 aa		3.64	□□□□□ -1.83
PNPLA6-223	ENST00000601668	PRM1	P04553	51 aa		3.54	□□□□□ -1.84
PNPLA6-223	ENST00000601668	MUC19	Q7Z5P9	8384 aa		3.3	□□□□□ -1.88
PNPLA6-223	ENST00000601668	KRTAP21-1	Q3LI58	79 aa		2.67	□□□□□ -1.98
PNPLA6-223	ENST00000601668	MUC16	Q8WXI7	14507 aa		2.46	□□□□□ -2.02

Retrieved 78 of 20,778 RNA–protein pairs in 79.3 ms