RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 TMEM258P61165 79 aa5.32□□□□□ -1.56
SSBP4-211ENST00000601614 COA5Q86WW8 74 aa5.31□□□□□ -1.56
SSBP4-211ENST00000601614 LCE3AQ5TA76 89 aa5.3□□□□□ -1.56
SSBP4-211ENST00000601614 RPS28P62857 69 aaKnown RBP5.28□□□□□ -1.56
SSBP4-211ENST00000601614 KRTAP12-4P60329 112 aa5.27□□□□□ -1.57
SSBP4-211ENST00000601614 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
SSBP4-211ENST00000601614 SPINT4Q6UDR6 99 aa5.23□□□□□ -1.57
SSBP4-211ENST00000601614 H7BZZ5 65 aa5.21□□□□□ -1.58
SSBP4-211ENST00000601614 ATP5EP56381 51 aaPredicted RBP5.21□□□□□ -1.58
SSBP4-211ENST00000601614 KRTAP12-1P59990 96 aa5.19□□□□□ -1.58
SSBP4-211ENST00000601614 KRTAP4-11Q9BYQ6 195 aa5.19□□□□□ -1.58
SSBP4-211ENST00000601614 SPATA8Q6RVD6 105 aa5.18□□□□□ -1.58
SSBP4-211ENST00000601614 LOC100996750A0A140TA64 210 aa5.14□□□□□ -1.59
SSBP4-211ENST00000601614 SERP1Q9Y6X1 66 aa5.14□□□□□ -1.59
SSBP4-211ENST00000601614 SEC61GP60059 68 aa5.11□□□□□ -1.59
SSBP4-211ENST00000601614 MUC5ACP98088 5654 aa5.1□□□□□ -1.59
SSBP4-211ENST00000601614 A0A1B0GU33 70 aa5.08□□□□□ -1.6
SSBP4-211ENST00000601614 KRTAP5-8O75690 187 aa5.08□□□□□ -1.6
SSBP4-211ENST00000601614 AHNAKQ09666 5890 aaKnown RBP5.06□□□□□ -1.6
SSBP4-211ENST00000601614 SMIM26A0A096LP01 95 aa5.05□□□□□ -1.6
SSBP4-211ENST00000601614 KRTAP12-3P60328 96 aa5.05□□□□□ -1.6
SSBP4-211ENST00000601614 MUC5BQ9HC84 5762 aaPredicted RBP5.04□□□□□ -1.6
SSBP4-211ENST00000601614 TNP1P09430 55 aa5.04□□□□□ -1.6
SSBP4-211ENST00000601614 KRTAP5-2Q701N4 177 aa5.02□□□□□ -1.61
SSBP4-211ENST00000601614 A0A1B0GU69 56 aa4.99□□□□□ -1.61
SSBP4-211ENST00000601614 A8MU10 97 aa4.98□□□□□ -1.61
SSBP4-211ENST00000601614 PRO0628Q9UI54 55 aa4.92□□□□□ -1.62
SSBP4-211ENST00000601614 V9GYY9 64 aa4.9□□□□□ -1.63
SSBP4-211ENST00000601614 Q1T7F1 81 aa4.85□□□□□ -1.63
SSBP4-211ENST00000601614 KRTAP9-9Q9BYP9 154 aa4.84□□□□□ -1.63
SSBP4-211ENST00000601614 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
SSBP4-211ENST00000601614 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
SSBP4-211ENST00000601614 LINC01558Q9Y6Z2 57 aa4.81□□□□□ -1.64
SSBP4-211ENST00000601614 PRR15LQ9BU68 103 aa4.8□□□□□ -1.64
SSBP4-211ENST00000601614 BRK1Q8WUW1 75 aa4.79□□□□□ -1.64
SSBP4-211ENST00000601614 MT1AP04731 61 aa4.77□□□□□ -1.65
SSBP4-211ENST00000601614 KRTAP6-2Q3LI66 62 aa4.7□□□□□ -1.66
SSBP4-211ENST00000601614 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
SSBP4-211ENST00000601614 UQCR11O14957 56 aa4.66□□□□□ -1.66
SSBP4-211ENST00000601614 PSPHP1O15172 72 aa4.65□□□□□ -1.67
SSBP4-211ENST00000601614 KRTAP19-4Q3LI73 84 aa4.62□□□□□ -1.67
SSBP4-211ENST00000601614 KRTAP5-1Q6L8H4 278 aa4.62□□□□□ -1.67
SSBP4-211ENST00000601614 A6NED7 52 aa4.59□□□□□ -1.67
SSBP4-211ENST00000601614 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
SSBP4-211ENST00000601614 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
SSBP4-211ENST00000601614 CDC42SE1Q9NRR8 79 aa4.59□□□□□ -1.67
SSBP4-211ENST00000601614 MIR22HGQ0VDD5 57 aa4.58□□□□□ -1.68
SSBP4-211ENST00000601614 KRTAP25-1Q3LHN0 102 aa4.55□□□□□ -1.68
SSBP4-211ENST00000601614 KTN1-AS1Q86SY8 53 aa4.52□□□□□ -1.69
SSBP4-211ENST00000601614 KRTAP15-1Q3LI76 137 aa4.51□□□□□ -1.69
SSBP4-211ENST00000601614 KRTAP9-6A8MVA2 160 aa4.44□□□□□ -1.7
SSBP4-211ENST00000601614 K7ERS5 55 aa4.42□□□□□ -1.7
SSBP4-211ENST00000601614 MT3P25713 68 aa4.35□□□□□ -1.71
SSBP4-211ENST00000601614 KRTAP23-1A1A580 65 aa4.29□□□□□ -1.72
SSBP4-211ENST00000601614 H3BS24 57 aa4.19□□□□□ -1.74
SSBP4-211ENST00000601614 ROMO1P60602 79 aa4.18□□□□□ -1.74
SSBP4-211ENST00000601614 LCE1EQ5T753 118 aa4.14□□□□□ -1.75
SSBP4-211ENST00000601614 PRAC1Q96KF2 57 aa4.13□□□□□ -1.75
SSBP4-211ENST00000601614 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
SSBP4-211ENST00000601614 LCE1BQ5T7P3 118 aa3.98□□□□□ -1.77
SSBP4-211ENST00000601614 KRTAP4-12Q9BQ66 201 aa3.89□□□□□ -1.79
SSBP4-211ENST00000601614 LCE1CQ5T751 118 aa3.86□□□□□ -1.79
SSBP4-211ENST00000601614 A0A0A0MQY5 61 aa3.76□□□□□ -1.81
SSBP4-211ENST00000601614 KRTAP5-11Q6L8G4 156 aa3.67□□□□□ -1.82
SSBP4-211ENST00000601614 LCE1FQ5T754 118 aa3.56□□□□□ -1.84
SSBP4-211ENST00000601614 PHGR1C9JFL3 82 aa3.55□□□□□ -1.84
SSBP4-211ENST00000601614 NDUFAF8A1L188 74 aa3.53□□□□□ -1.84
SSBP4-211ENST00000601614 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
SSBP4-211ENST00000601614 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
SSBP4-211ENST00000601614 KRTAP21-2Q3LI59 83 aa3.19□□□□□ -1.9
SSBP4-211ENST00000601614 LCE3DQ9BYE3 92 aa3.17□□□□□ -1.9
SSBP4-211ENST00000601614 INE1O15225 51 aa3.05□□□□□ -1.92
SSBP4-211ENST00000601614 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
SSBP4-211ENST00000601614 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
SSBP4-211ENST00000601614 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
SSBP4-211ENST00000601614 KRTAP21-1Q3LI58 79 aa2.67□□□□□ -1.98
SSBP4-211ENST00000601614 PRM1P04553 51 aa2.17□□□□□ -2.06
SSBP4-211ENST00000601614 MUC16Q8WXI7 14507 aa2.16□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 78.7 ms