RNA–Protein interactions for RNA: ENST00000601545.5

SNRPA-211, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 5

Gene SNRPA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-211ENST00000601545 Q1T7F1 81 aa7.49□□□□□ -1.21
SNRPA-211ENST00000601545 MT1LQ93083 61 aa7.49□□□□□ -1.21
SNRPA-211ENST00000601545 MT1MQ8N339 61 aa7.47□□□□□ -1.21
SNRPA-211ENST00000601545 UQCR11O14957 56 aa7.46□□□□□ -1.22
SNRPA-211ENST00000601545 KRTAP4-3Q9BYR4 195 aa7.35□□□□□ -1.23
SNRPA-211ENST00000601545 PSPHP1O15172 72 aa7.34□□□□□ -1.23
SNRPA-211ENST00000601545 MIR22HGQ0VDD5 57 aa7.3□□□□□ -1.24
SNRPA-211ENST00000601545 LCE1DQ5T752 114 aa7.29□□□□□ -1.24
SNRPA-211ENST00000601545 LCE4AQ5TA78 99 aa7.27□□□□□ -1.25
SNRPA-211ENST00000601545 KRTAP12-3P60328 96 aa7.25□□□□□ -1.25
SNRPA-211ENST00000601545 MT4P47944 62 aa7.24□□□□□ -1.25
SNRPA-211ENST00000601545 GPR98Q8WXG9 6306 aa7.22□□□□□ -1.25
SNRPA-211ENST00000601545 KRTAP4-7Q9BYR0 210 aa7.18□□□□□ -1.26
SNRPA-211ENST00000601545 A6NED7 52 aa7.15□□□□□ -1.26
SNRPA-211ENST00000601545 K7ERS5 55 aa7.13□□□□□ -1.27
SNRPA-211ENST00000601545 HMCN1Q96RW7 5635 aa7.12□□□□□ -1.27
SNRPA-211ENST00000601545 KRTAP25-1Q3LHN0 102 aa7.1□□□□□ -1.27
SNRPA-211ENST00000601545 KRTAP5-4Q6L8H1 288 aa7.1□□□□□ -1.27
SNRPA-211ENST00000601545 KRTAP4-6Q9BYQ5 205 aa7.03□□□□□ -1.28
SNRPA-211ENST00000601545 CDC42SE1Q9NRR8 79 aa6.95□□□□□ -1.3
SNRPA-211ENST00000601545 AHNAK2Q8IVF2 5795 aa6.88□□□□□ -1.31
SNRPA-211ENST00000601545 KRTAP5-5Q701N2 237 aaPredicted RBP6.81□□□□□ -1.32
SNRPA-211ENST00000601545 LOC100996750A0A140TA64 210 aa6.8□□□□□ -1.32
SNRPA-211ENST00000601545 KRTAP23-1A1A580 65 aa6.8□□□□□ -1.32
SNRPA-211ENST00000601545 KRTAP19-4Q3LI73 84 aa6.77□□□□□ -1.33
SNRPA-211ENST00000601545 KRTAP15-1Q3LI76 137 aa6.76□□□□□ -1.33
SNRPA-211ENST00000601545 KRTAP5-10Q6L8G5 202 aa6.76□□□□□ -1.33
SNRPA-211ENST00000601545 KRTAP20-2Q3LI61 65 aa6.73□□□□□ -1.33
SNRPA-211ENST00000601545 KRTAP12-4P60329 112 aa6.7□□□□□ -1.34
SNRPA-211ENST00000601545 ROMO1P60602 79 aa6.69□□□□□ -1.34
SNRPA-211ENST00000601545 SPRR5A0A1B0GTR4 108 aa6.68□□□□□ -1.34
SNRPA-211ENST00000601545 LCE3CQ5T5A8 94 aa6.67□□□□□ -1.34
SNRPA-211ENST00000601545 SYNE1Q8NF91 8797 aaKnown RBP6.66□□□□□ -1.34
SNRPA-211ENST00000601545 KRTAP5-3Q6L8H2 238 aa6.62□□□□□ -1.35
SNRPA-211ENST00000601545 BRK1Q8WUW1 75 aa6.57□□□□□ -1.36
SNRPA-211ENST00000601545 KRTAP5-7Q6L8G8 165 aa6.48□□□□□ -1.37
SNRPA-211ENST00000601545 MT1AP04731 61 aa6.37□□□□□ -1.39
SNRPA-211ENST00000601545 KRTAP6-1Q3LI64 71 aa6.36□□□□□ -1.39
SNRPA-211ENST00000601545 KRTAP9-6A8MVA2 160 aa6.29□□□□□ -1.4
SNRPA-211ENST00000601545 PMAIP1Q13794 54 aa6.22□□□□□ -1.41
SNRPA-211ENST00000601545 KRTAP5-2Q701N4 177 aa6.21□□□□□ -1.42
SNRPA-211ENST00000601545 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
SNRPA-211ENST00000601545 KRTAP4-11Q9BYQ6 195 aa6.16□□□□□ -1.42
SNRPA-211ENST00000601545 PRO0628Q9UI54 55 aa6.12□□□□□ -1.43
SNRPA-211ENST00000601545 KRTAP6-2Q3LI66 62 aa6.08□□□□□ -1.44
SNRPA-211ENST00000601545 KRTAP5-8O75690 187 aa5.95□□□□□ -1.46
SNRPA-211ENST00000601545 OBSCNQ5VST9 7968 aa5.85□□□□□ -1.47
SNRPA-211ENST00000601545 MT3P25713 68 aa5.84□□□□□ -1.47
SNRPA-211ENST00000601545 PRAC1Q96KF2 57 aa5.82□□□□□ -1.48
SNRPA-211ENST00000601545 KTN1-AS1Q86SY8 53 aa5.76□□□□□ -1.49
SNRPA-211ENST00000601545 KRTAP9-9Q9BYP9 154 aa5.67□□□□□ -1.5
SNRPA-211ENST00000601545 MUC5BQ9HC84 5762 aaPredicted RBP5.65□□□□□ -1.51
SNRPA-211ENST00000601545 AHNAKQ09666 5890 aaKnown RBP5.64□□□□□ -1.51
SNRPA-211ENST00000601545 MUC5ACP98088 5654 aa5.61□□□□□ -1.51
SNRPA-211ENST00000601545 KRTAP5-1Q6L8H4 278 aa5.59□□□□□ -1.51
SNRPA-211ENST00000601545 SVIPQ8NHG7 77 aa5.41□□□□□ -1.54
SNRPA-211ENST00000601545 LCE1EQ5T753 118 aa5.33□□□□□ -1.56
SNRPA-211ENST00000601545 LCE1BQ5T7P3 118 aa5.12□□□□□ -1.59
SNRPA-211ENST00000601545 KRTAP4-2Q9BYR5 136 aa5.06□□□□□ -1.6
SNRPA-211ENST00000601545 LCE1CQ5T751 118 aa4.96□□□□□ -1.62
SNRPA-211ENST00000601545 LUZP6Q538Z0 58 aa4.95□□□□□ -1.62
SNRPA-211ENST00000601545 LCE3DQ9BYE3 92 aa4.81□□□□□ -1.64
SNRPA-211ENST00000601545 KRTAP4-12Q9BQ66 201 aa4.67□□□□□ -1.66
SNRPA-211ENST00000601545 LCE3EQ5T5B0 92 aa4.52□□□□□ -1.69
SNRPA-211ENST00000601545 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
SNRPA-211ENST00000601545 KRTAP5-11Q6L8G4 156 aa4.47□□□□□ -1.69
SNRPA-211ENST00000601545 H3BS24 57 aa4.37□□□□□ -1.71
SNRPA-211ENST00000601545 LCE1FQ5T754 118 aa4.36□□□□□ -1.71
SNRPA-211ENST00000601545 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
SNRPA-211ENST00000601545 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
SNRPA-211ENST00000601545 PHGR1C9JFL3 82 aa3.97□□□□□ -1.77
SNRPA-211ENST00000601545 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
SNRPA-211ENST00000601545 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
SNRPA-211ENST00000601545 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
SNRPA-211ENST00000601545 INE1O15225 51 aa3.6□□□□□ -1.83
SNRPA-211ENST00000601545 PRM1P04553 51 aa3.41□□□□□ -1.86
SNRPA-211ENST00000601545 KRTAP21-1Q3LI58 79 aa2.99□□□□□ -1.93
SNRPA-211ENST00000601545 MUC16Q8WXI7 14507 aa2.61□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 50.6 ms