RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.62□□□□□ -2.15
VRK3-222ENST00000601324 UBL5Q9BZL1 73 aa1.62□□□□□ -2.15
VRK3-222ENST00000601324 PRO2289Q9P1D8 64 aa1.62□□□□□ -2.15
VRK3-222ENST00000601324 SNURFQ9Y675 71 aa1.62□□□□□ -2.15
VRK3-222ENST00000601324 LCA10Q71F78 164 aa1.61□□□□□ -2.15
VRK3-222ENST00000601324 C14orf132Q9NPU4 83 aa1.61□□□□□ -2.15
VRK3-222ENST00000601324 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
VRK3-222ENST00000601324 MUC5ACP98088 5654 aa1.6□□□□□ -2.15
VRK3-222ENST00000601324 TRBV7-4A0A0J9YYF1 115 aa1.6□□□□□ -2.15
VRK3-222ENST00000601324 hDV103S1A0JD37 113 aa1.6□□□□□ -2.15
VRK3-222ENST00000601324 TMEM256-PLSCR3K7ERE1 68 aa1.6□□□□□ -2.15
VRK3-222ENST00000601324 PDE6GP18545 87 aa1.6□□□□□ -2.15
VRK3-222ENST00000601324 MP68P56378 58 aa1.6□□□□□ -2.15
VRK3-222ENST00000601324 TMEM254Q8TBM7 123 aa1.6□□□□□ -2.15
VRK3-222ENST00000601324 CYP4F30PQ9H0H9 118 aa1.6□□□□□ -2.15
VRK3-222ENST00000601324 CRIPTQ9P021 101 aa1.6□□□□□ -2.15
VRK3-222ENST00000601324 ORMDL1Q9P0S3 153 aa1.6□□□□□ -2.15
VRK3-222ENST00000601324 TRAV22A0A0B4J277 110 aa1.59□□□□□ -2.15
VRK3-222ENST00000601324 A8MUN3 132 aa1.59□□□□□ -2.15
VRK3-222ENST00000601324 C7orf65Q6ZTY9 151 aa1.59□□□□□ -2.15
VRK3-222ENST00000601324 LOC110117498A0A087WWA1 95 aa1.58□□□□□ -2.16
VRK3-222ENST00000601324 HCG22E2RYF7 251 aa1.58□□□□□ -2.16
VRK3-222ENST00000601324 NREPQ16612 68 aa1.58□□□□□ -2.16
VRK3-222ENST00000601324 KRTAP19-7Q3SYF9 63 aa1.58□□□□□ -2.16
VRK3-222ENST00000601324 KRTAP19-3Q7Z4W3 81 aa1.58□□□□□ -2.16
VRK3-222ENST00000601324 CHKB-CPT1BH3BT56 60 aa1.57□□□□□ -2.16
VRK3-222ENST00000601324 KRTAP12-1P59990 96 aa1.57□□□□□ -2.16
VRK3-222ENST00000601324 NDUFB1O75438 58 aa1.56□□□□□ -2.16
VRK3-222ENST00000601324 LINC01554Q52M75 96 aa1.56□□□□□ -2.16
VRK3-222ENST00000601324 CSAG1Q6PB30 78 aa1.56□□□□□ -2.16
VRK3-222ENST00000601324 Q6ZQT0 140 aa1.56□□□□□ -2.16
VRK3-222ENST00000601324 SPTSSBQ8NFR3 76 aa1.56□□□□□ -2.16
VRK3-222ENST00000601324 CDC42SE1Q9NRR8 79 aa1.56□□□□□ -2.16
VRK3-222ENST00000601324 LOC101927531A0A1B0GV80 90 aa1.55□□□□□ -2.16
VRK3-222ENST00000601324 MT1EP04732 61 aa1.55□□□□□ -2.16
VRK3-222ENST00000601324 KRTAP20-2Q3LI61 65 aa1.54□□□□□ -2.16
VRK3-222ENST00000601324 A0A1B0GW54 56 aa1.53□□□□□ -2.16
VRK3-222ENST00000601324 KRTAP5-8O75690 187 aa1.53□□□□□ -2.16
VRK3-222ENST00000601324 PRR15LQ9BU68 103 aa1.53□□□□□ -2.16
VRK3-222ENST00000601324 S4R3F8 94 aa1.53□□□□□ -2.16
VRK3-222ENST00000601324 H3BPC8 53 aa1.51□□□□□ -2.17
VRK3-222ENST00000601324 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
VRK3-222ENST00000601324 CASC2Q6XLA1 102 aa1.51□□□□□ -2.17
VRK3-222ENST00000601324 LINC00208Q96KT6 92 aa1.51□□□□□ -2.17
VRK3-222ENST00000601324 LINC01558Q9Y6Z2 57 aa1.51□□□□□ -2.17
VRK3-222ENST00000601324 H0YAA0 97 aa1.5□□□□□ -2.17
VRK3-222ENST00000601324 MT1GP13640 62 aa1.5□□□□□ -2.17
VRK3-222ENST00000601324 MMP24-AS1A0A0U1RRL7 71 aa1.49□□□□□ -2.17
VRK3-222ENST00000601324 KRTAP13-4Q3LI77 160 aa1.49□□□□□ -2.17
VRK3-222ENST00000601324 MT1MQ8N339 61 aa1.49□□□□□ -2.17
VRK3-222ENST00000601324 PLAC4Q8WY50 150 aa1.49□□□□□ -2.17
VRK3-222ENST00000601324 K7EQZ3 153 aa1.47□□□□□ -2.17
VRK3-222ENST00000601324 MRPL34Q9BQ48 92 aaKnown RBP1.47□□□□□ -2.17
VRK3-222ENST00000601324 H0Y9P7 68 aa1.46□□□□□ -2.18
VRK3-222ENST00000601324 SPATA8Q6RVD6 105 aa1.46□□□□□ -2.18
VRK3-222ENST00000601324 COA5Q86WW8 74 aa1.46□□□□□ -2.18
VRK3-222ENST00000601324 ROMO1P60602 79 aa1.45□□□□□ -2.18
VRK3-222ENST00000601324 MIR22HGQ0VDD5 57 aa1.43□□□□□ -2.18
VRK3-222ENST00000601324 MT1LQ93083 61 aa1.43□□□□□ -2.18
VRK3-222ENST00000601324 UQCR11O14957 56 aa1.42□□□□□ -2.18
VRK3-222ENST00000601324 TP53AIP1Q9HCN2 124 aa1.42□□□□□ -2.18
VRK3-222ENST00000601324 ACYP2P14621 99 aa1.4□□□□□ -2.19
VRK3-222ENST00000601324 A0A1B0GU69 56 aa1.39□□□□□ -2.19
VRK3-222ENST00000601324 KRTAP19-5Q3LI72 72 aa1.39□□□□□ -2.19
VRK3-222ENST00000601324 SYNE1Q8NF91 8797 aaKnown RBP1.39□□□□□ -2.19
VRK3-222ENST00000601324 DMAC1Q96GE9 116 aa1.38□□□□□ -2.19
VRK3-222ENST00000601324 M0QZ58 72 aa1.35□□□□□ -2.19
VRK3-222ENST00000601324 A0A0D9SG42 100 aa1.27□□□□□ -2.21
VRK3-222ENST00000601324 C10orf95Q9H7T3 257 aa1.23□□□□□ -2.21
VRK3-222ENST00000601324 KRTAP6-1Q3LI64 71 aa1.22□□□□□ -2.21
VRK3-222ENST00000601324 KRTAP6-2Q3LI66 62 aa1.21□□□□□ -2.22
VRK3-222ENST00000601324 MT1AP04731 61 aa1.2□□□□□ -2.22
VRK3-222ENST00000601324 INE1O15225 51 aa1.15□□□□□ -2.23
VRK3-222ENST00000601324 PHGR1C9JFL3 82 aa1.03□□□□□ -2.24
VRK3-222ENST00000601324 TNP1P09430 55 aa1.03□□□□□ -2.24
VRK3-222ENST00000601324 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
VRK3-222ENST00000601324 KRTAP21-1Q3LI58 79 aa0.79□□□□□ -2.28
VRK3-222ENST00000601324 PRM1P04553 51 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 73.1 ms