RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 TMEM258P61165 79 aa6.43□□□□□ -1.38
HERC3-214ENST00000601319 MT1EP04732 61 aa6.41□□□□□ -1.38
HERC3-214ENST00000601319 LINC01558Q9Y6Z2 57 aa6.41□□□□□ -1.38
HERC3-214ENST00000601319 KRTAP19-3Q7Z4W3 81 aa6.34□□□□□ -1.39
HERC3-214ENST00000601319 KRTAP19-5Q3LI72 72 aa6.3□□□□□ -1.4
HERC3-214ENST00000601319 C10orf95Q9H7T3 257 aa6.28□□□□□ -1.4
HERC3-214ENST00000601319 TNP1P09430 55 aa6.26□□□□□ -1.41
HERC3-214ENST00000601319 UQCR11O14957 56 aa6.24□□□□□ -1.41
HERC3-214ENST00000601319 DSTQ03001 7570 aaKnown RBP6.2□□□□□ -1.42
HERC3-214ENST00000601319 MT1GP13640 62 aa6.2□□□□□ -1.42
HERC3-214ENST00000601319 LCE3AQ5TA76 89 aa6.19□□□□□ -1.42
HERC3-214ENST00000601319 SVIPQ8NHG7 77 aa6.18□□□□□ -1.42
HERC3-214ENST00000601319 PP632Q6XCG6 107 aa6.16□□□□□ -1.42
HERC3-214ENST00000601319 MT1LQ93083 61 aa6.13□□□□□ -1.43
HERC3-214ENST00000601319 RPS28P62857 69 aaKnown RBP6.09□□□□□ -1.43
HERC3-214ENST00000601319 MIR22HGQ0VDD5 57 aa6.09□□□□□ -1.43
HERC3-214ENST00000601319 MT1MQ8N339 61 aa6.09□□□□□ -1.43
HERC3-214ENST00000601319 V9GYY9 64 aa6.08□□□□□ -1.44
HERC3-214ENST00000601319 Q1T7F1 81 aa6.03□□□□□ -1.44
HERC3-214ENST00000601319 KRTAP15-1Q3LI76 137 aa6.03□□□□□ -1.44
HERC3-214ENST00000601319 PSPHP1O15172 72 aa5.98□□□□□ -1.45
HERC3-214ENST00000601319 K7ERS5 55 aa5.97□□□□□ -1.45
HERC3-214ENST00000601319 KRTAP12-3P60328 96 aa5.97□□□□□ -1.45
HERC3-214ENST00000601319 KRTAP25-1Q3LHN0 102 aa5.97□□□□□ -1.45
HERC3-214ENST00000601319 KRTAP23-1A1A580 65 aa5.94□□□□□ -1.46
HERC3-214ENST00000601319 KRTAP4-3Q9BYR4 195 aa5.89□□□□□ -1.47
HERC3-214ENST00000601319 A6NED7 52 aa5.8□□□□□ -1.48
HERC3-214ENST00000601319 KRTAP5-4Q6L8H1 288 aa5.8□□□□□ -1.48
HERC3-214ENST00000601319 GPR98Q8WXG9 6306 aa5.79□□□□□ -1.48
HERC3-214ENST00000601319 HMCN1Q96RW7 5635 aa5.78□□□□□ -1.48
HERC3-214ENST00000601319 MT4P47944 62 aa5.74□□□□□ -1.49
HERC3-214ENST00000601319 CDC42SE1Q9NRR8 79 aa5.67□□□□□ -1.5
HERC3-214ENST00000601319 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.63□□□□□ -1.51
HERC3-214ENST00000601319 PRO0628Q9UI54 55 aa5.63□□□□□ -1.51
HERC3-214ENST00000601319 KRTAP5-5Q701N2 237 aaPredicted RBP5.62□□□□□ -1.51
HERC3-214ENST00000601319 ROMO1P60602 79 aa5.58□□□□□ -1.52
HERC3-214ENST00000601319 AHNAK2Q8IVF2 5795 aa5.53□□□□□ -1.52
HERC3-214ENST00000601319 LCE3CQ5T5A8 94 aa5.51□□□□□ -1.53
HERC3-214ENST00000601319 SPRR5A0A1B0GTR4 108 aa5.46□□□□□ -1.54
HERC3-214ENST00000601319 KRTAP20-2Q3LI61 65 aa5.44□□□□□ -1.54
HERC3-214ENST00000601319 BRK1Q8WUW1 75 aa5.43□□□□□ -1.54
HERC3-214ENST00000601319 KRTAP12-4P60329 112 aa5.41□□□□□ -1.54
HERC3-214ENST00000601319 KRTAP5-10Q6L8G5 202 aa5.41□□□□□ -1.54
HERC3-214ENST00000601319 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
HERC3-214ENST00000601319 KRTAP5-11Q6L8G4 156 aa5.33□□□□□ -1.56
HERC3-214ENST00000601319 PMAIP1Q13794 54 aa5.24□□□□□ -1.57
HERC3-214ENST00000601319 MT1AP04731 61 aa5.23□□□□□ -1.57
HERC3-214ENST00000601319 KRTAP5-7Q6L8G8 165 aa5.2□□□□□ -1.58
HERC3-214ENST00000601319 KRTAP9-6A8MVA2 160 aa5.19□□□□□ -1.58
HERC3-214ENST00000601319 KRTAP6-1Q3LI64 71 aa5.17□□□□□ -1.58
HERC3-214ENST00000601319 KTN1-AS1Q86SY8 53 aa5.15□□□□□ -1.59
HERC3-214ENST00000601319 KRTAP5-2Q701N4 177 aa5.11□□□□□ -1.59
HERC3-214ENST00000601319 KRTAP6-2Q3LI66 62 aa4.93□□□□□ -1.62
HERC3-214ENST00000601319 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
HERC3-214ENST00000601319 KRTAP5-1Q6L8H4 278 aa4.84□□□□□ -1.63
HERC3-214ENST00000601319 KRTAP5-8O75690 187 aa4.79□□□□□ -1.64
HERC3-214ENST00000601319 MT3P25713 68 aa4.76□□□□□ -1.65
HERC3-214ENST00000601319 OBSCNQ5VST9 7968 aa4.73□□□□□ -1.65
HERC3-214ENST00000601319 KRTAP4-4Q9BYR3 166 aa4.7□□□□□ -1.66
HERC3-214ENST00000601319 PRAC1Q96KF2 57 aa4.66□□□□□ -1.66
HERC3-214ENST00000601319 MUC5ACP98088 5654 aa4.57□□□□□ -1.68
HERC3-214ENST00000601319 AHNAKQ09666 5890 aaKnown RBP4.54□□□□□ -1.68
HERC3-214ENST00000601319 MUC5BQ9HC84 5762 aaPredicted RBP4.51□□□□□ -1.69
HERC3-214ENST00000601319 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
HERC3-214ENST00000601319 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
HERC3-214ENST00000601319 LCE1BQ5T7P3 118 aa4.08□□□□□ -1.76
HERC3-214ENST00000601319 LCE1FQ5T754 118 aa4.07□□□□□ -1.76
HERC3-214ENST00000601319 NDUFAF8A1L188 74 aa3.99□□□□□ -1.77
HERC3-214ENST00000601319 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
HERC3-214ENST00000601319 LUZP6Q538Z0 58 aa3.96□□□□□ -1.78
HERC3-214ENST00000601319 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
HERC3-214ENST00000601319 INE1O15225 51 aa3.51□□□□□ -1.85
HERC3-214ENST00000601319 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
HERC3-214ENST00000601319 PHGR1C9JFL3 82 aa3.18□□□□□ -1.9
HERC3-214ENST00000601319 MUC19Q7Z5P9 8384 aa2.91□□□□□ -1.94
HERC3-214ENST00000601319 PRM1P04553 51 aa2.84□□□□□ -1.95
HERC3-214ENST00000601319 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
HERC3-214ENST00000601319 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 58.6 ms