RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 KRTAP19-3Q7Z4W3 81 aa8□□□□□ -1.13
IRF3-228ENST00000601291 KRTAP19-4Q3LI73 84 aa7.96□□□□□ -1.14
IRF3-228ENST00000601291 SPRR2EP22531 72 aa7.93□□□□□ -1.14
IRF3-228ENST00000601291 SPRR2BP35325 72 aa7.93□□□□□ -1.14
IRF3-228ENST00000601291 SPRR2AP35326 72 aa7.93□□□□□ -1.14
IRF3-228ENST00000601291 LCE1AQ5T7P2 110 aa7.93□□□□□ -1.14
IRF3-228ENST00000601291 MT1GP13640 62 aa7.92□□□□□ -1.14
IRF3-228ENST00000601291 LCE5AQ5TCM9 118 aa7.87□□□□□ -1.15
IRF3-228ENST00000601291 LCE3CQ5T5A8 94 aa7.84□□□□□ -1.15
IRF3-228ENST00000601291 MDN1Q9NU22 5596 aa7.83□□□□□ -1.16
IRF3-228ENST00000601291 MT1MQ8N339 61 aa7.79□□□□□ -1.16
IRF3-228ENST00000601291 KRTAP4-7Q9BYR0 210 aa7.72□□□□□ -1.17
IRF3-228ENST00000601291 NEBP20929 6669 aa7.67□□□□□ -1.18
IRF3-228ENST00000601291 SPRR2DP22532 72 aa7.65□□□□□ -1.18
IRF3-228ENST00000601291 SPRR5A0A1B0GTR4 108 aa7.59□□□□□ -1.2
IRF3-228ENST00000601291 KRTAP4-3Q9BYR4 195 aa7.59□□□□□ -1.2
IRF3-228ENST00000601291 LCE3BQ5TA77 95 aa7.35□□□□□ -1.23
IRF3-228ENST00000601291 DSTQ03001 7570 aaKnown RBP7.35□□□□□ -1.23
IRF3-228ENST00000601291 KRTAP9-6A8MVA2 160 aa7.34□□□□□ -1.23
IRF3-228ENST00000601291 LUZP6Q538Z0 58 aa7.29□□□□□ -1.24
IRF3-228ENST00000601291 LOC100996750A0A140TA64 210 aa7.27□□□□□ -1.25
IRF3-228ENST00000601291 KRTAP2-3P0C7H8 128 aa7.24□□□□□ -1.25
IRF3-228ENST00000601291 KRTAP2-4Q9BYR9 128 aa7.24□□□□□ -1.25
IRF3-228ENST00000601291 KRTAP20-1Q3LI63 56 aa7.18□□□□□ -1.26
IRF3-228ENST00000601291 KRTAP2-2Q9BYT5 123 aa7.08□□□□□ -1.28
IRF3-228ENST00000601291 KRTAP2-1Q9BYU5 128 aa7.08□□□□□ -1.28
IRF3-228ENST00000601291 KRTAP5-5Q701N2 237 aaPredicted RBP7.03□□□□□ -1.28
IRF3-228ENST00000601291 NDUFAF8A1L188 74 aa6.88□□□□□ -1.31
IRF3-228ENST00000601291 MT1AP04731 61 aa6.86□□□□□ -1.31
IRF3-228ENST00000601291 KRTAP5-4Q6L8H1 288 aa6.83□□□□□ -1.32
IRF3-228ENST00000601291 LCE4AQ5TA78 99 aa6.8□□□□□ -1.32
IRF3-228ENST00000601291 KRTAP6-1Q3LI64 71 aa6.77□□□□□ -1.33
IRF3-228ENST00000601291 KRTAP12-4P60329 112 aa6.65□□□□□ -1.35
IRF3-228ENST00000601291 MT4P47944 62 aa6.62□□□□□ -1.35
IRF3-228ENST00000601291 SYNE1Q8NF91 8797 aaKnown RBP6.6□□□□□ -1.35
IRF3-228ENST00000601291 KRTAP4-9Q9BYQ8 210 aa6.58□□□□□ -1.36
IRF3-228ENST00000601291 LCE1DQ5T752 114 aa6.54□□□□□ -1.36
IRF3-228ENST00000601291 KRTAP9-4Q9BYQ2 154 aa6.53□□□□□ -1.36
IRF3-228ENST00000601291 KRTAP4-6Q9BYQ5 205 aa6.52□□□□□ -1.37
IRF3-228ENST00000601291 KRTAP20-2Q3LI61 65 aa6.4□□□□□ -1.38
IRF3-228ENST00000601291 HMCN1Q96RW7 5635 aa6.37□□□□□ -1.39
IRF3-228ENST00000601291 KRTAP6-2Q3LI66 62 aa6.29□□□□□ -1.4
IRF3-228ENST00000601291 H3BS24 57 aa6.27□□□□□ -1.41
IRF3-228ENST00000601291 MT3P25713 68 aa6.25□□□□□ -1.41
IRF3-228ENST00000601291 KRTAP5-3Q6L8H2 238 aa6.16□□□□□ -1.42
IRF3-228ENST00000601291 KRTAP5-2Q701N4 177 aa6.15□□□□□ -1.42
IRF3-228ENST00000601291 A0A0A0MQY5 61 aa6.04□□□□□ -1.44
IRF3-228ENST00000601291 LCE3DQ9BYE3 92 aa5.86□□□□□ -1.47
IRF3-228ENST00000601291 GPR98Q8WXG9 6306 aa5.76□□□□□ -1.49
IRF3-228ENST00000601291 AHNAK2Q8IVF2 5795 aa5.74□□□□□ -1.49
IRF3-228ENST00000601291 INE1O15225 51 aa5.72□□□□□ -1.49
IRF3-228ENST00000601291 LCE3EQ5T5B0 92 aa5.67□□□□□ -1.5
IRF3-228ENST00000601291 OBSCNQ5VST9 7968 aa5.67□□□□□ -1.5
IRF3-228ENST00000601291 KRTAP4-11Q9BYQ6 195 aa5.61□□□□□ -1.51
IRF3-228ENST00000601291 KRTAP5-10Q6L8G5 202 aa5.55□□□□□ -1.52
IRF3-228ENST00000601291 LCE1EQ5T753 118 aa5.48□□□□□ -1.53
IRF3-228ENST00000601291 KRTAP5-8O75690 187 aa5.39□□□□□ -1.55
IRF3-228ENST00000601291 KRTAP5-1Q6L8H4 278 aa5.34□□□□□ -1.55
IRF3-228ENST00000601291 KRTAP5-7Q6L8G8 165 aa5.19□□□□□ -1.58
IRF3-228ENST00000601291 LCE1BQ5T7P3 118 aa5.12□□□□□ -1.59
IRF3-228ENST00000601291 LCE1CQ5T751 118 aa5.09□□□□□ -1.59
IRF3-228ENST00000601291 MUC5ACP98088 5654 aa5.09□□□□□ -1.6
IRF3-228ENST00000601291 KRTAP4-2Q9BYR5 136 aa5.08□□□□□ -1.6
IRF3-228ENST00000601291 KRTAP9-9Q9BYP9 154 aa4.95□□□□□ -1.62
IRF3-228ENST00000601291 PRM1P04553 51 aa4.82□□□□□ -1.64
IRF3-228ENST00000601291 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.74□□□□□ -1.65
IRF3-228ENST00000601291 MUC5BQ9HC84 5762 aaPredicted RBP4.59□□□□□ -1.67
IRF3-228ENST00000601291 KRTAP5-11Q6L8G4 156 aa4.52□□□□□ -1.69
IRF3-228ENST00000601291 AHNAKQ09666 5890 aaKnown RBP4.5□□□□□ -1.69
IRF3-228ENST00000601291 KRTAP21-2Q3LI59 83 aa4.44□□□□□ -1.7
IRF3-228ENST00000601291 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
IRF3-228ENST00000601291 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
IRF3-228ENST00000601291 KRTAP4-4Q9BYR3 166 aa3.94□□□□□ -1.78
IRF3-228ENST00000601291 PHGR1C9JFL3 82 aa3.87□□□□□ -1.79
IRF3-228ENST00000601291 MUC19Q7Z5P9 8384 aa3.39□□□□□ -1.87
IRF3-228ENST00000601291 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
IRF3-228ENST00000601291 MUC16Q8WXI7 14507 aa2.49□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms