RNA–Protein interactions for RNA: ENST00000601141.5

SIN3B-211, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 1,473 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-211ENST00000601141 KTN1-AS1Q86SY8 53 aa7.52□□□□□ -1.21
SIN3B-211ENST00000601141 SPRR2DP22532 72 aa7.46□□□□□ -1.22
SIN3B-211ENST00000601141 KRTAP19-3Q7Z4W3 81 aa7.43□□□□□ -1.22
SIN3B-211ENST00000601141 KRTAP12-3P60328 96 aa7.41□□□□□ -1.22
SIN3B-211ENST00000601141 KRTAP23-1A1A580 65 aa7.4□□□□□ -1.22
SIN3B-211ENST00000601141 KRTAP20-1Q3LI63 56 aa7.4□□□□□ -1.22
SIN3B-211ENST00000601141 LCE5AQ5TCM9 118 aa7.36□□□□□ -1.23
SIN3B-211ENST00000601141 MT1LQ93083 61 aa7.34□□□□□ -1.23
SIN3B-211ENST00000601141 KRTAP2-3P0C7H8 128 aa7.31□□□□□ -1.24
SIN3B-211ENST00000601141 KRTAP2-4Q9BYR9 128 aa7.31□□□□□ -1.24
SIN3B-211ENST00000601141 MT1GP13640 62 aa7.3□□□□□ -1.24
SIN3B-211ENST00000601141 PP632Q6XCG6 107 aa7.26□□□□□ -1.25
SIN3B-211ENST00000601141 LCE3BQ5TA77 95 aa7.2□□□□□ -1.26
SIN3B-211ENST00000601141 MT1MQ8N339 61 aa7.19□□□□□ -1.26
SIN3B-211ENST00000601141 KRTAP2-2Q9BYT5 123 aa7.11□□□□□ -1.27
SIN3B-211ENST00000601141 KRTAP2-1Q9BYU5 128 aa7.11□□□□□ -1.27
SIN3B-211ENST00000601141 KRTAP15-1Q3LI76 137 aa7.09□□□□□ -1.27
SIN3B-211ENST00000601141 DSTQ03001 7570 aaKnown RBP7.08□□□□□ -1.28
SIN3B-211ENST00000601141 KRTAP4-7Q9BYR0 210 aa7.03□□□□□ -1.28
SIN3B-211ENST00000601141 KRTAP4-3Q9BYR4 195 aa7.02□□□□□ -1.29
SIN3B-211ENST00000601141 PRAC1Q96KF2 57 aa6.99□□□□□ -1.29
SIN3B-211ENST00000601141 KRTAP19-4Q3LI73 84 aa6.96□□□□□ -1.3
SIN3B-211ENST00000601141 LCE3CQ5T5A8 94 aa6.86□□□□□ -1.31
SIN3B-211ENST00000601141 LOC100996750A0A140TA64 210 aa6.63□□□□□ -1.35
SIN3B-211ENST00000601141 LCE4AQ5TA78 99 aa6.59□□□□□ -1.36
SIN3B-211ENST00000601141 KRTAP4-9Q9BYQ8 210 aa6.59□□□□□ -1.36
SIN3B-211ENST00000601141 KRTAP5-4Q6L8H1 288 aa6.54□□□□□ -1.36
SIN3B-211ENST00000601141 KRTAP5-5Q701N2 237 aaPredicted RBP6.53□□□□□ -1.36
SIN3B-211ENST00000601141 MT4P47944 62 aa6.5□□□□□ -1.37
SIN3B-211ENST00000601141 LCE1DQ5T752 114 aa6.48□□□□□ -1.37
SIN3B-211ENST00000601141 KRTAP9-6A8MVA2 160 aa6.45□□□□□ -1.38
SIN3B-211ENST00000601141 HMCN1Q96RW7 5635 aa6.37□□□□□ -1.39
SIN3B-211ENST00000601141 KRTAP4-6Q9BYQ5 205 aa6.34□□□□□ -1.4
SIN3B-211ENST00000601141 KRTAP12-4P60329 112 aa6.27□□□□□ -1.41
SIN3B-211ENST00000601141 MT1AP04731 61 aa6.24□□□□□ -1.41
SIN3B-211ENST00000601141 KRTAP6-1Q3LI64 71 aa6.19□□□□□ -1.42
SIN3B-211ENST00000601141 SPRR5A0A1B0GTR4 108 aa6.17□□□□□ -1.42
SIN3B-211ENST00000601141 KRTAP20-2Q3LI61 65 aa6.17□□□□□ -1.42
SIN3B-211ENST00000601141 SYNE1Q8NF91 8797 aaKnown RBP6.17□□□□□ -1.42
SIN3B-211ENST00000601141 KRTAP9-4Q9BYQ2 154 aa5.98□□□□□ -1.45
SIN3B-211ENST00000601141 KRTAP5-3Q6L8H2 238 aa5.95□□□□□ -1.46
SIN3B-211ENST00000601141 H3BS24 57 aa5.94□□□□□ -1.46
SIN3B-211ENST00000601141 AHNAK2Q8IVF2 5795 aa5.93□□□□□ -1.46
SIN3B-211ENST00000601141 GPR98Q8WXG9 6306 aa5.86□□□□□ -1.47
SIN3B-211ENST00000601141 NDUFAF8A1L188 74 aa5.86□□□□□ -1.47
SIN3B-211ENST00000601141 KRTAP6-2Q3LI66 62 aa5.83□□□□□ -1.48
SIN3B-211ENST00000601141 KRTAP5-2Q701N4 177 aa5.82□□□□□ -1.48
SIN3B-211ENST00000601141 LUZP6Q538Z0 58 aa5.77□□□□□ -1.49
SIN3B-211ENST00000601141 KRTAP5-10Q6L8G5 202 aa5.74□□□□□ -1.49
SIN3B-211ENST00000601141 MT3P25713 68 aa5.7□□□□□ -1.5
SIN3B-211ENST00000601141 KRTAP4-11Q9BYQ6 195 aa5.51□□□□□ -1.53
SIN3B-211ENST00000601141 KRTAP5-7Q6L8G8 165 aa5.45□□□□□ -1.54
SIN3B-211ENST00000601141 OBSCNQ5VST9 7968 aa5.41□□□□□ -1.54
SIN3B-211ENST00000601141 A0A0A0MQY5 61 aa5.39□□□□□ -1.55
SIN3B-211ENST00000601141 KRTAP5-8O75690 187 aa5.3□□□□□ -1.56
SIN3B-211ENST00000601141 KRTAP5-1Q6L8H4 278 aa5.13□□□□□ -1.59
SIN3B-211ENST00000601141 LCE1EQ5T753 118 aa5.08□□□□□ -1.6
SIN3B-211ENST00000601141 LCE3DQ9BYE3 92 aa5.06□□□□□ -1.6
SIN3B-211ENST00000601141 INE1O15225 51 aa5□□□□□ -1.61
SIN3B-211ENST00000601141 MUC5ACP98088 5654 aa4.98□□□□□ -1.61
SIN3B-211ENST00000601141 KRTAP9-9Q9BYP9 154 aa4.96□□□□□ -1.62
SIN3B-211ENST00000601141 LCE3EQ5T5B0 92 aa4.83□□□□□ -1.64
SIN3B-211ENST00000601141 MUC5BQ9HC84 5762 aaPredicted RBP4.82□□□□□ -1.64
SIN3B-211ENST00000601141 LCE1BQ5T7P3 118 aa4.81□□□□□ -1.64
SIN3B-211ENST00000601141 KRTAP4-2Q9BYR5 136 aa4.76□□□□□ -1.65
SIN3B-211ENST00000601141 LCE1CQ5T751 118 aa4.73□□□□□ -1.65
SIN3B-211ENST00000601141 AHNAKQ09666 5890 aaKnown RBP4.7□□□□□ -1.66
SIN3B-211ENST00000601141 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.35□□□□□ -1.71
SIN3B-211ENST00000601141 KRTAP5-11Q6L8G4 156 aa4.24□□□□□ -1.73
SIN3B-211ENST00000601141 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
SIN3B-211ENST00000601141 KRTAP21-2Q3LI59 83 aa4.05□□□□□ -1.76
SIN3B-211ENST00000601141 LCE1FQ5T754 118 aa3.99□□□□□ -1.77
SIN3B-211ENST00000601141 PRM1P04553 51 aa3.92□□□□□ -1.78
SIN3B-211ENST00000601141 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
SIN3B-211ENST00000601141 PHGR1C9JFL3 82 aa3.64□□□□□ -1.83
SIN3B-211ENST00000601141 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
SIN3B-211ENST00000601141 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
SIN3B-211ENST00000601141 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 146.7 ms