RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 SPRR2BP35325 72 aa8.25□□□□□ -1.09
IRF3-227ENST00000600911 SPRR2AP35326 72 aa8.25□□□□□ -1.09
IRF3-227ENST00000600911 NEBP20929 6669 aa8.22□□□□□ -1.09
IRF3-227ENST00000600911 KTN1-AS1Q86SY8 53 aa8.21□□□□□ -1.09
IRF3-227ENST00000600911 MT1LQ93083 61 aa8.21□□□□□ -1.09
IRF3-227ENST00000600911 KRTAP19-3Q7Z4W3 81 aa8.17□□□□□ -1.1
IRF3-227ENST00000600911 LCE5AQ5TCM9 118 aa8.11□□□□□ -1.11
IRF3-227ENST00000600911 KRTAP15-1Q3LI76 137 aa8.07□□□□□ -1.12
IRF3-227ENST00000600911 MT1GP13640 62 aa8.02□□□□□ -1.13
IRF3-227ENST00000600911 MT1MQ8N339 61 aa7.99□□□□□ -1.13
IRF3-227ENST00000600911 KRTAP4-7Q9BYR0 210 aa7.99□□□□□ -1.13
IRF3-227ENST00000600911 SPRR2DP22532 72 aa7.95□□□□□ -1.14
IRF3-227ENST00000600911 KRTAP4-3Q9BYR4 195 aa7.91□□□□□ -1.14
IRF3-227ENST00000600911 DSTQ03001 7570 aaKnown RBP7.82□□□□□ -1.16
IRF3-227ENST00000600911 LCE3CQ5T5A8 94 aa7.79□□□□□ -1.16
IRF3-227ENST00000600911 KRTAP19-4Q3LI73 84 aa7.7□□□□□ -1.18
IRF3-227ENST00000600911 LCE3BQ5TA77 95 aa7.67□□□□□ -1.18
IRF3-227ENST00000600911 KRTAP20-1Q3LI63 56 aa7.64□□□□□ -1.19
IRF3-227ENST00000600911 KRTAP2-3P0C7H8 128 aa7.63□□□□□ -1.19
IRF3-227ENST00000600911 KRTAP2-4Q9BYR9 128 aa7.63□□□□□ -1.19
IRF3-227ENST00000600911 LOC100996750A0A140TA64 210 aa7.52□□□□□ -1.21
IRF3-227ENST00000600911 KRTAP9-6A8MVA2 160 aa7.49□□□□□ -1.21
IRF3-227ENST00000600911 KRTAP2-2Q9BYT5 123 aa7.45□□□□□ -1.22
IRF3-227ENST00000600911 KRTAP2-1Q9BYU5 128 aa7.45□□□□□ -1.22
IRF3-227ENST00000600911 SPRR5A0A1B0GTR4 108 aa7.34□□□□□ -1.24
IRF3-227ENST00000600911 KRTAP5-5Q701N2 237 aaPredicted RBP7.27□□□□□ -1.25
IRF3-227ENST00000600911 KRTAP5-4Q6L8H1 288 aa7.12□□□□□ -1.27
IRF3-227ENST00000600911 KRTAP4-9Q9BYQ8 210 aa7.04□□□□□ -1.28
IRF3-227ENST00000600911 LCE4AQ5TA78 99 aa7.01□□□□□ -1.29
IRF3-227ENST00000600911 SYNE1Q8NF91 8797 aaKnown RBP7□□□□□ -1.29
IRF3-227ENST00000600911 MT4P47944 62 aa6.96□□□□□ -1.3
IRF3-227ENST00000600911 KRTAP6-1Q3LI64 71 aa6.96□□□□□ -1.3
IRF3-227ENST00000600911 MT1AP04731 61 aa6.95□□□□□ -1.3
IRF3-227ENST00000600911 LCE1DQ5T752 114 aa6.92□□□□□ -1.3
IRF3-227ENST00000600911 KRTAP4-6Q9BYQ5 205 aa6.9□□□□□ -1.31
IRF3-227ENST00000600911 HMCN1Q96RW7 5635 aa6.82□□□□□ -1.32
IRF3-227ENST00000600911 H3BS24 57 aa6.77□□□□□ -1.33
IRF3-227ENST00000600911 KRTAP12-4P60329 112 aa6.72□□□□□ -1.33
IRF3-227ENST00000600911 KRTAP20-2Q3LI61 65 aa6.68□□□□□ -1.34
IRF3-227ENST00000600911 LUZP6Q538Z0 58 aa6.65□□□□□ -1.34
IRF3-227ENST00000600911 KRTAP9-4Q9BYQ2 154 aa6.64□□□□□ -1.35
IRF3-227ENST00000600911 KRTAP5-3Q6L8H2 238 aa6.48□□□□□ -1.37
IRF3-227ENST00000600911 KRTAP6-2Q3LI66 62 aa6.46□□□□□ -1.38
IRF3-227ENST00000600911 KRTAP5-2Q701N4 177 aa6.39□□□□□ -1.39
IRF3-227ENST00000600911 NDUFAF8A1L188 74 aa6.32□□□□□ -1.4
IRF3-227ENST00000600911 AHNAK2Q8IVF2 5795 aa6.27□□□□□ -1.41
IRF3-227ENST00000600911 MT3P25713 68 aa6.26□□□□□ -1.41
IRF3-227ENST00000600911 OBSCNQ5VST9 7968 aa6.06□□□□□ -1.44
IRF3-227ENST00000600911 KRTAP5-10Q6L8G5 202 aa6□□□□□ -1.45
IRF3-227ENST00000600911 GPR98Q8WXG9 6306 aa5.97□□□□□ -1.45
IRF3-227ENST00000600911 KRTAP4-11Q9BYQ6 195 aa5.88□□□□□ -1.47
IRF3-227ENST00000600911 LCE3DQ9BYE3 92 aa5.74□□□□□ -1.49
IRF3-227ENST00000600911 A0A0A0MQY5 61 aa5.74□□□□□ -1.49
IRF3-227ENST00000600911 KRTAP5-8O75690 187 aa5.71□□□□□ -1.5
IRF3-227ENST00000600911 KRTAP5-1Q6L8H4 278 aa5.61□□□□□ -1.51
IRF3-227ENST00000600911 KRTAP5-7Q6L8G8 165 aa5.6□□□□□ -1.51
IRF3-227ENST00000600911 LCE1EQ5T753 118 aa5.54□□□□□ -1.52
IRF3-227ENST00000600911 LCE3EQ5T5B0 92 aa5.53□□□□□ -1.52
IRF3-227ENST00000600911 MUC5ACP98088 5654 aa5.43□□□□□ -1.54
IRF3-227ENST00000600911 KRTAP4-2Q9BYR5 136 aa5.3□□□□□ -1.56
IRF3-227ENST00000600911 INE1O15225 51 aa5.26□□□□□ -1.57
IRF3-227ENST00000600911 LCE1BQ5T7P3 118 aa5.26□□□□□ -1.57
IRF3-227ENST00000600911 LCE1CQ5T751 118 aa5.17□□□□□ -1.58
IRF3-227ENST00000600911 KRTAP9-9Q9BYP9 154 aa5.15□□□□□ -1.59
IRF3-227ENST00000600911 MUC5BQ9HC84 5762 aaPredicted RBP5.03□□□□□ -1.6
IRF3-227ENST00000600911 AHNAKQ09666 5890 aaKnown RBP4.82□□□□□ -1.64
IRF3-227ENST00000600911 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.81□□□□□ -1.64
IRF3-227ENST00000600911 PRM1P04553 51 aa4.68□□□□□ -1.66
IRF3-227ENST00000600911 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
IRF3-227ENST00000600911 KRTAP21-2Q3LI59 83 aa4.57□□□□□ -1.68
IRF3-227ENST00000600911 KRTAP4-12Q9BQ66 201 aa4.56□□□□□ -1.68
IRF3-227ENST00000600911 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
IRF3-227ENST00000600911 KRTAP4-4Q9BYR3 166 aa4.13□□□□□ -1.75
IRF3-227ENST00000600911 PHGR1C9JFL3 82 aa3.99□□□□□ -1.77
IRF3-227ENST00000600911 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.83
IRF3-227ENST00000600911 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
IRF3-227ENST00000600911 MUC16Q8WXI7 14507 aa2.61□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms