RNA–Protein interactions for RNA: ENST00000600813.1

LINC01872-203, Transcript of long intergenic non-protein coding RNA 1872, humanhuman

TSL 3

Gene LINC01872, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01872-203ENST00000600813 SPRR2DP22532 72 aa5.19□□□□□ -1.58
LINC01872-203ENST00000600813 MT1EP04732 61 aa5.17□□□□□ -1.58
LINC01872-203ENST00000600813 PSPHP1O15172 72 aa5.16□□□□□ -1.58
LINC01872-203ENST00000600813 Q1T7F1 81 aa5.16□□□□□ -1.58
LINC01872-203ENST00000600813 KRTAP19-5Q3LI72 72 aa5.14□□□□□ -1.59
LINC01872-203ENST00000600813 MIR22HGQ0VDD5 57 aa5.13□□□□□ -1.59
LINC01872-203ENST00000600813 PCP4P48539 62 aa5.12□□□□□ -1.59
LINC01872-203ENST00000600813 LCE3AQ5TA76 89 aa5.1□□□□□ -1.59
LINC01872-203ENST00000600813 V9GYY9 64 aa5.1□□□□□ -1.59
LINC01872-203ENST00000600813 TNP1P09430 55 aa5.09□□□□□ -1.59
LINC01872-203ENST00000600813 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
LINC01872-203ENST00000600813 KRTAP2-2Q9BYT5 123 aa5.07□□□□□ -1.6
LINC01872-203ENST00000600813 KRTAP2-1Q9BYU5 128 aa5.07□□□□□ -1.6
LINC01872-203ENST00000600813 RPS28P62857 69 aaKnown RBP5.02□□□□□ -1.61
LINC01872-203ENST00000600813 MT1LQ93083 61 aa4.96□□□□□ -1.62
LINC01872-203ENST00000600813 MT1GP13640 62 aa4.95□□□□□ -1.62
LINC01872-203ENST00000600813 DSTQ03001 7570 aaKnown RBP4.95□□□□□ -1.62
LINC01872-203ENST00000600813 A6NED7 52 aa4.93□□□□□ -1.62
LINC01872-203ENST00000600813 K7ERS5 55 aa4.9□□□□□ -1.63
LINC01872-203ENST00000600813 MT1MQ8N339 61 aa4.9□□□□□ -1.63
LINC01872-203ENST00000600813 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
LINC01872-203ENST00000600813 KRTAP25-1Q3LHN0 102 aa4.88□□□□□ -1.63
LINC01872-203ENST00000600813 KRTAP4-3Q9BYR4 195 aa4.86□□□□□ -1.63
LINC01872-203ENST00000600813 PP632Q6XCG6 107 aa4.84□□□□□ -1.63
LINC01872-203ENST00000600813 SVIPQ8NHG7 77 aa4.81□□□□□ -1.64
LINC01872-203ENST00000600813 CDC42SE1Q9NRR8 79 aa4.75□□□□□ -1.65
LINC01872-203ENST00000600813 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
LINC01872-203ENST00000600813 ROMO1P60602 79 aa4.69□□□□□ -1.66
LINC01872-203ENST00000600813 KRTAP15-1Q3LI76 137 aa4.6□□□□□ -1.67
LINC01872-203ENST00000600813 KRTAP5-4Q6L8H1 288 aa4.59□□□□□ -1.67
LINC01872-203ENST00000600813 MT4P47944 62 aa4.56□□□□□ -1.68
LINC01872-203ENST00000600813 LCE3CQ5T5A8 94 aa4.52□□□□□ -1.69
LINC01872-203ENST00000600813 KRTAP5-5Q701N2 237 aaPredicted RBP4.51□□□□□ -1.69
LINC01872-203ENST00000600813 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
LINC01872-203ENST00000600813 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
LINC01872-203ENST00000600813 BRK1Q8WUW1 75 aa4.41□□□□□ -1.7
LINC01872-203ENST00000600813 GPR98Q8WXG9 6306 aa4.38□□□□□ -1.71
LINC01872-203ENST00000600813 KRTAP9-6A8MVA2 160 aa4.34□□□□□ -1.71
LINC01872-203ENST00000600813 KRTAP20-2Q3LI61 65 aa4.31□□□□□ -1.72
LINC01872-203ENST00000600813 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
LINC01872-203ENST00000600813 AHNAK2Q8IVF2 5795 aa4.29□□□□□ -1.72
LINC01872-203ENST00000600813 SPRR5A0A1B0GTR4 108 aa4.27□□□□□ -1.73
LINC01872-203ENST00000600813 KRTAP12-4P60329 112 aa4.27□□□□□ -1.73
LINC01872-203ENST00000600813 KRTAP6-1Q3LI64 71 aa4.22□□□□□ -1.73
LINC01872-203ENST00000600813 MT1AP04731 61 aa4.2□□□□□ -1.74
LINC01872-203ENST00000600813 KRTAP5-11Q6L8G4 156 aa4.19□□□□□ -1.74
LINC01872-203ENST00000600813 KRTAP5-10Q6L8G5 202 aa4.18□□□□□ -1.74
LINC01872-203ENST00000600813 PMAIP1Q13794 54 aa4.15□□□□□ -1.75
LINC01872-203ENST00000600813 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
LINC01872-203ENST00000600813 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
LINC01872-203ENST00000600813 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
LINC01872-203ENST00000600813 KRTAP5-7Q6L8G8 165 aa3.97□□□□□ -1.77
LINC01872-203ENST00000600813 PRO0628Q9UI54 55 aa3.94□□□□□ -1.78
LINC01872-203ENST00000600813 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
LINC01872-203ENST00000600813 MT3P25713 68 aa3.82□□□□□ -1.8
LINC01872-203ENST00000600813 KRTAP5-1Q6L8H4 278 aa3.81□□□□□ -1.8
LINC01872-203ENST00000600813 KRTAP5-8O75690 187 aa3.78□□□□□ -1.8
LINC01872-203ENST00000600813 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
LINC01872-203ENST00000600813 KTN1-AS1Q86SY8 53 aa3.73□□□□□ -1.81
LINC01872-203ENST00000600813 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
LINC01872-203ENST00000600813 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
LINC01872-203ENST00000600813 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
LINC01872-203ENST00000600813 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
LINC01872-203ENST00000600813 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
LINC01872-203ENST00000600813 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
LINC01872-203ENST00000600813 LUZP6Q538Z0 58 aa3.24□□□□□ -1.89
LINC01872-203ENST00000600813 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
LINC01872-203ENST00000600813 A0A0A0MQY5 61 aa3.1□□□□□ -1.91
LINC01872-203ENST00000600813 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
LINC01872-203ENST00000600813 NDUFAF8A1L188 74 aa2.8□□□□□ -1.96
LINC01872-203ENST00000600813 KRTAP21-2Q3LI59 83 aa2.78□□□□□ -1.96
LINC01872-203ENST00000600813 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
LINC01872-203ENST00000600813 PHGR1C9JFL3 82 aa2.52□□□□□ -2.01
LINC01872-203ENST00000600813 INE1O15225 51 aa2.46□□□□□ -2.02
LINC01872-203ENST00000600813 PRM1P04553 51 aa2.44□□□□□ -2.02
LINC01872-203ENST00000600813 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
LINC01872-203ENST00000600813 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
LINC01872-203ENST00000600813 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 52 ms