RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 MT1LQ93083 61 aa4.25□□□□□ -1.73
FARP1-230ENST00000600380 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
FARP1-230ENST00000600380 KRTAP12-3P60328 96 aa4.23□□□□□ -1.73
FARP1-230ENST00000600380 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
FARP1-230ENST00000600380 BRK1Q8WUW1 75 aa4.19□□□□□ -1.74
FARP1-230ENST00000600380 MT1GP13640 62 aa4.18□□□□□ -1.74
FARP1-230ENST00000600380 KRTAP23-1A1A580 65 aa4.16□□□□□ -1.74
FARP1-230ENST00000600380 MT1MQ8N339 61 aa4.16□□□□□ -1.74
FARP1-230ENST00000600380 LCE3BQ5TA77 95 aa4.15□□□□□ -1.75
FARP1-230ENST00000600380 KRTAP4-3Q9BYR4 195 aa4.12□□□□□ -1.75
FARP1-230ENST00000600380 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
FARP1-230ENST00000600380 KRTAP2-2Q9BYT5 123 aa4.11□□□□□ -1.75
FARP1-230ENST00000600380 KRTAP2-1Q9BYU5 128 aa4.11□□□□□ -1.75
FARP1-230ENST00000600380 DSTQ03001 7570 aaKnown RBP4.1□□□□□ -1.75
FARP1-230ENST00000600380 PP632Q6XCG6 107 aa4.08□□□□□ -1.76
FARP1-230ENST00000600380 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
FARP1-230ENST00000600380 KRTAP15-1Q3LI76 137 aa4.03□□□□□ -1.76
FARP1-230ENST00000600380 KRTAP4-6Q9BYQ5 205 aa4.03□□□□□ -1.76
FARP1-230ENST00000600380 PMAIP1Q13794 54 aa3.94□□□□□ -1.78
FARP1-230ENST00000600380 LCE3CQ5T5A8 94 aa3.93□□□□□ -1.78
FARP1-230ENST00000600380 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
FARP1-230ENST00000600380 PRO0628Q9UI54 55 aa3.87□□□□□ -1.79
FARP1-230ENST00000600380 KRTAP4-9Q9BYQ8 210 aa3.85□□□□□ -1.79
FARP1-230ENST00000600380 PRAC1Q96KF2 57 aa3.83□□□□□ -1.8
FARP1-230ENST00000600380 KRTAP5-4Q6L8H1 288 aa3.82□□□□□ -1.8
FARP1-230ENST00000600380 KRTAP5-5Q701N2 237 aaPredicted RBP3.8□□□□□ -1.8
FARP1-230ENST00000600380 KRTAP9-6A8MVA2 160 aa3.78□□□□□ -1.8
FARP1-230ENST00000600380 LCE4AQ5TA78 99 aa3.78□□□□□ -1.8
FARP1-230ENST00000600380 LCE1DQ5T752 114 aa3.77□□□□□ -1.81
FARP1-230ENST00000600380 HMCN1Q96RW7 5635 aa3.76□□□□□ -1.81
FARP1-230ENST00000600380 MT4P47944 62 aa3.75□□□□□ -1.81
FARP1-230ENST00000600380 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
FARP1-230ENST00000600380 KTN1-AS1Q86SY8 53 aa3.63□□□□□ -1.83
FARP1-230ENST00000600380 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
FARP1-230ENST00000600380 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
FARP1-230ENST00000600380 MT1AP04731 61 aa3.59□□□□□ -1.83
FARP1-230ENST00000600380 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
FARP1-230ENST00000600380 AHNAK2Q8IVF2 5795 aa3.56□□□□□ -1.84
FARP1-230ENST00000600380 KRTAP12-4P60329 112 aa3.56□□□□□ -1.84
FARP1-230ENST00000600380 SPRR5A0A1B0GTR4 108 aa3.55□□□□□ -1.84
FARP1-230ENST00000600380 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
FARP1-230ENST00000600380 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
FARP1-230ENST00000600380 SVIPQ8NHG7 77 aa3.43□□□□□ -1.86
FARP1-230ENST00000600380 KRTAP5-2Q701N4 177 aa3.39□□□□□ -1.87
FARP1-230ENST00000600380 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
FARP1-230ENST00000600380 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
FARP1-230ENST00000600380 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
FARP1-230ENST00000600380 H3BS24 57 aa3.24□□□□□ -1.89
FARP1-230ENST00000600380 MT3P25713 68 aa3.24□□□□□ -1.89
FARP1-230ENST00000600380 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
FARP1-230ENST00000600380 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
FARP1-230ENST00000600380 KRTAP5-7Q6L8G8 165 aa3.18□□□□□ -1.9
FARP1-230ENST00000600380 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
FARP1-230ENST00000600380 KRTAP4-2Q9BYR5 136 aa3.12□□□□□ -1.91
FARP1-230ENST00000600380 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
FARP1-230ENST00000600380 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
FARP1-230ENST00000600380 MUC5ACP98088 5654 aa3.02□□□□□ -1.93
FARP1-230ENST00000600380 KRTAP5-1Q6L8H4 278 aa3□□□□□ -1.93
FARP1-230ENST00000600380 LCE1EQ5T753 118 aa2.91□□□□□ -1.94
FARP1-230ENST00000600380 AHNAKQ09666 5890 aaKnown RBP2.91□□□□□ -1.94
FARP1-230ENST00000600380 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
FARP1-230ENST00000600380 LCE3DQ9BYE3 92 aa2.86□□□□□ -1.95
FARP1-230ENST00000600380 NDUFAF8A1L188 74 aa2.77□□□□□ -1.97
FARP1-230ENST00000600380 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
FARP1-230ENST00000600380 LCE3EQ5T5B0 92 aa2.73□□□□□ -1.97
FARP1-230ENST00000600380 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
FARP1-230ENST00000600380 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.51□□□□□ -2.01
FARP1-230ENST00000600380 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
FARP1-230ENST00000600380 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
FARP1-230ENST00000600380 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
FARP1-230ENST00000600380 PRM1P04553 51 aa2.22□□□□□ -2.05
FARP1-230ENST00000600380 A0A0A0MQY5 61 aa2.21□□□□□ -2.06
FARP1-230ENST00000600380 INE1O15225 51 aa2.19□□□□□ -2.06
FARP1-230ENST00000600380 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
FARP1-230ENST00000600380 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
FARP1-230ENST00000600380 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
FARP1-230ENST00000600380 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
FARP1-230ENST00000600380 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms