RNA–Protein interactions for RNA: ENST00000599644.1

SIPA1L3-208, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 4

Gene SIPA1L3, Length 545 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-208ENST00000599644 CDC42SE1Q9NRR8 79 aa7.35□□□□□ -1.23
SIPA1L3-208ENST00000599644 KRTAP4-9Q9BYQ8 210 aa7.34□□□□□ -1.23
SIPA1L3-208ENST00000599644 MT1EP04732 61 aa7.32□□□□□ -1.24
SIPA1L3-208ENST00000599644 KRTAP19-3Q7Z4W3 81 aa7.31□□□□□ -1.24
SIPA1L3-208ENST00000599644 KRTAP4-12Q9BQ66 201 aa7.3□□□□□ -1.24
SIPA1L3-208ENST00000599644 BRK1Q8WUW1 75 aa7.21□□□□□ -1.26
SIPA1L3-208ENST00000599644 H3BS24 57 aa7.15□□□□□ -1.26
SIPA1L3-208ENST00000599644 TNP1P09430 55 aa7.13□□□□□ -1.27
SIPA1L3-208ENST00000599644 KRTAP19-5Q3LI72 72 aa7.13□□□□□ -1.27
SIPA1L3-208ENST00000599644 LCE1DQ5T752 114 aa7.11□□□□□ -1.27
SIPA1L3-208ENST00000599644 MT1GP13640 62 aa7.09□□□□□ -1.27
SIPA1L3-208ENST00000599644 C10orf95Q9H7T3 257 aa7.08□□□□□ -1.28
SIPA1L3-208ENST00000599644 HMCN1Q96RW7 5635 aa7.03□□□□□ -1.28
SIPA1L3-208ENST00000599644 PP632Q6XCG6 107 aa7.02□□□□□ -1.29
SIPA1L3-208ENST00000599644 MT4P47944 62 aa7□□□□□ -1.29
SIPA1L3-208ENST00000599644 ROMO1P60602 79 aa6.99□□□□□ -1.29
SIPA1L3-208ENST00000599644 MT1MQ8N339 61 aa6.99□□□□□ -1.29
SIPA1L3-208ENST00000599644 KRTAP9-9Q9BYP9 154 aa6.99□□□□□ -1.29
SIPA1L3-208ENST00000599644 KRTAP9-4Q9BYQ2 154 aa6.99□□□□□ -1.29
SIPA1L3-208ENST00000599644 KRTAP25-1Q3LHN0 102 aa6.98□□□□□ -1.29
SIPA1L3-208ENST00000599644 LCE4AQ5TA78 99 aa6.98□□□□□ -1.29
SIPA1L3-208ENST00000599644 MT1LQ93083 61 aa6.95□□□□□ -1.3
SIPA1L3-208ENST00000599644 AHNAK2Q8IVF2 5795 aa6.89□□□□□ -1.31
SIPA1L3-208ENST00000599644 KRTAP4-3Q9BYR4 195 aa6.89□□□□□ -1.31
SIPA1L3-208ENST00000599644 PMAIP1Q13794 54 aa6.83□□□□□ -1.32
SIPA1L3-208ENST00000599644 LCE3AQ5TA76 89 aa6.82□□□□□ -1.32
SIPA1L3-208ENST00000599644 KRTAP19-4Q3LI73 84 aa6.81□□□□□ -1.32
SIPA1L3-208ENST00000599644 KRTAP5-4Q6L8H1 288 aa6.81□□□□□ -1.32
SIPA1L3-208ENST00000599644 PRO0628Q9UI54 55 aa6.78□□□□□ -1.32
SIPA1L3-208ENST00000599644 KRTAP5-10Q6L8G5 202 aa6.73□□□□□ -1.33
SIPA1L3-208ENST00000599644 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
SIPA1L3-208ENST00000599644 KRTAP4-7Q9BYR0 210 aa6.65□□□□□ -1.34
SIPA1L3-208ENST00000599644 KRTAP12-3P60328 96 aa6.56□□□□□ -1.36
SIPA1L3-208ENST00000599644 KRTAP5-3Q6L8H2 238 aa6.51□□□□□ -1.37
SIPA1L3-208ENST00000599644 KRTAP5-7Q6L8G8 165 aa6.5□□□□□ -1.37
SIPA1L3-208ENST00000599644 KRTAP20-2Q3LI61 65 aa6.47□□□□□ -1.37
SIPA1L3-208ENST00000599644 KRTAP5-5Q701N2 237 aaPredicted RBP6.43□□□□□ -1.38
SIPA1L3-208ENST00000599644 SPRR5A0A1B0GTR4 108 aa6.37□□□□□ -1.39
SIPA1L3-208ENST00000599644 KTN1-AS1Q86SY8 53 aa6.34□□□□□ -1.39
SIPA1L3-208ENST00000599644 KRTAP12-4P60329 112 aa6.33□□□□□ -1.4
SIPA1L3-208ENST00000599644 KRTAP15-1Q3LI76 137 aa6.32□□□□□ -1.4
SIPA1L3-208ENST00000599644 PRAC1Q96KF2 57 aa6.31□□□□□ -1.4
SIPA1L3-208ENST00000599644 KRTAP4-2Q9BYR5 136 aa6.31□□□□□ -1.4
SIPA1L3-208ENST00000599644 KRTAP4-11Q9BYQ6 195 aa6.29□□□□□ -1.4
SIPA1L3-208ENST00000599644 SYNE1Q8NF91 8797 aaKnown RBP6.26□□□□□ -1.41
SIPA1L3-208ENST00000599644 SVIPQ8NHG7 77 aa6.14□□□□□ -1.43
SIPA1L3-208ENST00000599644 LCE3CQ5T5A8 94 aa6.08□□□□□ -1.44
SIPA1L3-208ENST00000599644 KRTAP5-2Q701N4 177 aa5.92□□□□□ -1.46
SIPA1L3-208ENST00000599644 KRTAP6-1Q3LI64 71 aa5.91□□□□□ -1.46
SIPA1L3-208ENST00000599644 MT1AP04731 61 aa5.89□□□□□ -1.47
SIPA1L3-208ENST00000599644 KRTAP5-8O75690 187 aa5.78□□□□□ -1.48
SIPA1L3-208ENST00000599644 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
SIPA1L3-208ENST00000599644 AHNAKQ09666 5890 aaKnown RBP5.72□□□□□ -1.49
SIPA1L3-208ENST00000599644 MUC5BQ9HC84 5762 aaPredicted RBP5.72□□□□□ -1.49
SIPA1L3-208ENST00000599644 KRTAP6-2Q3LI66 62 aa5.7□□□□□ -1.5
SIPA1L3-208ENST00000599644 MUC5ACP98088 5654 aa5.67□□□□□ -1.5
SIPA1L3-208ENST00000599644 OBSCNQ5VST9 7968 aa5.61□□□□□ -1.51
SIPA1L3-208ENST00000599644 LUZP6Q538Z0 58 aa5.48□□□□□ -1.53
SIPA1L3-208ENST00000599644 MT3P25713 68 aa5.4□□□□□ -1.54
SIPA1L3-208ENST00000599644 KRTAP5-1Q6L8H4 278 aa5.38□□□□□ -1.55
SIPA1L3-208ENST00000599644 LCE1EQ5T753 118 aa5□□□□□ -1.61
SIPA1L3-208ENST00000599644 NDUFAF8A1L188 74 aa4.86□□□□□ -1.63
SIPA1L3-208ENST00000599644 LCE1BQ5T7P3 118 aa4.8□□□□□ -1.64
SIPA1L3-208ENST00000599644 LCE1CQ5T751 118 aa4.66□□□□□ -1.66
SIPA1L3-208ENST00000599644 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
SIPA1L3-208ENST00000599644 LCE3EQ5T5B0 92 aa4.36□□□□□ -1.71
SIPA1L3-208ENST00000599644 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
SIPA1L3-208ENST00000599644 KRTAP5-11Q6L8G4 156 aa4.25□□□□□ -1.73
SIPA1L3-208ENST00000599644 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
SIPA1L3-208ENST00000599644 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
SIPA1L3-208ENST00000599644 INE1O15225 51 aa4.07□□□□□ -1.76
SIPA1L3-208ENST00000599644 PHGR1C9JFL3 82 aa3.94□□□□□ -1.78
SIPA1L3-208ENST00000599644 KRTAP21-2Q3LI59 83 aa3.89□□□□□ -1.79
SIPA1L3-208ENST00000599644 KRTAP4-4Q9BYR3 166 aa3.66□□□□□ -1.82
SIPA1L3-208ENST00000599644 PRM1P04553 51 aa3.58□□□□□ -1.84
SIPA1L3-208ENST00000599644 MUC19Q7Z5P9 8384 aa3.51□□□□□ -1.85
SIPA1L3-208ENST00000599644 KRTAP21-1Q3LI58 79 aa2.97□□□□□ -1.93
SIPA1L3-208ENST00000599644 MUC16Q8WXI7 14507 aa2.45□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 111.6 ms