RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 KRTAP4-9Q9BYQ8 210 aa8.4□□□□□ -1.06
CCDC61-207ENST00000599044 K7ERS5 55 aa8.38□□□□□ -1.07
CCDC61-207ENST00000599044 KRTAP19-5Q3LI72 72 aa8.36□□□□□ -1.07
CCDC61-207ENST00000599044 CDC42SE1Q9NRR8 79 aa8.33□□□□□ -1.08
CCDC61-207ENST00000599044 MT1GP13640 62 aa8.26□□□□□ -1.09
CCDC61-207ENST00000599044 TNP1P09430 55 aa8.25□□□□□ -1.09
CCDC61-207ENST00000599044 LCE1DQ5T752 114 aa8.19□□□□□ -1.1
CCDC61-207ENST00000599044 HMCN1Q96RW7 5635 aa8.16□□□□□ -1.1
CCDC61-207ENST00000599044 MT1MQ8N339 61 aa8.15□□□□□ -1.1
CCDC61-207ENST00000599044 MT1LQ93083 61 aa8.14□□□□□ -1.11
CCDC61-207ENST00000599044 PP632Q6XCG6 107 aa8.13□□□□□ -1.11
CCDC61-207ENST00000599044 LCE3AQ5TA76 89 aa8.09□□□□□ -1.11
CCDC61-207ENST00000599044 LCE4AQ5TA78 99 aa8.08□□□□□ -1.12
CCDC61-207ENST00000599044 KRTAP25-1Q3LHN0 102 aa8.05□□□□□ -1.12
CCDC61-207ENST00000599044 KRTAP4-3Q9BYR4 195 aa8.05□□□□□ -1.12
CCDC61-207ENST00000599044 AHNAK2Q8IVF2 5795 aa8.04□□□□□ -1.12
CCDC61-207ENST00000599044 MT4P47944 62 aa8.03□□□□□ -1.12
CCDC61-207ENST00000599044 BRK1Q8WUW1 75 aa8.01□□□□□ -1.13
CCDC61-207ENST00000599044 ROMO1P60602 79 aa7.98□□□□□ -1.13
CCDC61-207ENST00000599044 KRTAP5-4Q6L8H1 288 aa7.89□□□□□ -1.15
CCDC61-207ENST00000599044 KRTAP5-10Q6L8G5 202 aa7.82□□□□□ -1.16
CCDC61-207ENST00000599044 KRTAP4-6Q9BYQ5 205 aa7.81□□□□□ -1.16
CCDC61-207ENST00000599044 KRTAP4-7Q9BYR0 210 aa7.81□□□□□ -1.16
CCDC61-207ENST00000599044 KRTAP23-1A1A580 65 aa7.76□□□□□ -1.17
CCDC61-207ENST00000599044 KRTAP12-3P60328 96 aa7.75□□□□□ -1.17
CCDC61-207ENST00000599044 KRTAP5-7Q6L8G8 165 aa7.57□□□□□ -1.2
CCDC61-207ENST00000599044 PMAIP1Q13794 54 aa7.54□□□□□ -1.2
CCDC61-207ENST00000599044 KRTAP5-3Q6L8H2 238 aa7.54□□□□□ -1.2
CCDC61-207ENST00000599044 KRTAP5-5Q701N2 237 aaPredicted RBP7.51□□□□□ -1.21
CCDC61-207ENST00000599044 KRTAP20-2Q3LI61 65 aa7.46□□□□□ -1.22
CCDC61-207ENST00000599044 PRO0628Q9UI54 55 aa7.46□□□□□ -1.22
CCDC61-207ENST00000599044 KRTAP15-1Q3LI76 137 aa7.43□□□□□ -1.22
CCDC61-207ENST00000599044 LOC100996750A0A140TA64 210 aa7.41□□□□□ -1.22
CCDC61-207ENST00000599044 SPRR5A0A1B0GTR4 108 aa7.38□□□□□ -1.23
CCDC61-207ENST00000599044 SYNE1Q8NF91 8797 aaKnown RBP7.33□□□□□ -1.24
CCDC61-207ENST00000599044 KRTAP12-4P60329 112 aa7.28□□□□□ -1.24
CCDC61-207ENST00000599044 KRTAP19-4Q3LI73 84 aa7.25□□□□□ -1.25
CCDC61-207ENST00000599044 LCE3CQ5T5A8 94 aa7.2□□□□□ -1.26
CCDC61-207ENST00000599044 PRAC1Q96KF2 57 aa7.2□□□□□ -1.26
CCDC61-207ENST00000599044 KTN1-AS1Q86SY8 53 aa7□□□□□ -1.29
CCDC61-207ENST00000599044 KRTAP6-1Q3LI64 71 aa6.92□□□□□ -1.3
CCDC61-207ENST00000599044 MT1AP04731 61 aa6.89□□□□□ -1.31
CCDC61-207ENST00000599044 KRTAP4-11Q9BYQ6 195 aa6.89□□□□□ -1.31
CCDC61-207ENST00000599044 KRTAP5-2Q701N4 177 aa6.88□□□□□ -1.31
CCDC61-207ENST00000599044 KRTAP9-6A8MVA2 160 aa6.84□□□□□ -1.31
CCDC61-207ENST00000599044 AHNAKQ09666 5890 aaKnown RBP6.72□□□□□ -1.33
CCDC61-207ENST00000599044 KRTAP9-4Q9BYQ2 154 aa6.7□□□□□ -1.34
CCDC61-207ENST00000599044 KRTAP5-8O75690 187 aa6.68□□□□□ -1.34
CCDC61-207ENST00000599044 MUC5BQ9HC84 5762 aaPredicted RBP6.67□□□□□ -1.34
CCDC61-207ENST00000599044 MUC5ACP98088 5654 aa6.66□□□□□ -1.34
CCDC61-207ENST00000599044 KRTAP6-2Q3LI66 62 aa6.64□□□□□ -1.35
CCDC61-207ENST00000599044 SVIPQ8NHG7 77 aa6.64□□□□□ -1.35
CCDC61-207ENST00000599044 OBSCNQ5VST9 7968 aa6.59□□□□□ -1.35
CCDC61-207ENST00000599044 KRTAP9-9Q9BYP9 154 aa6.37□□□□□ -1.39
CCDC61-207ENST00000599044 MT3P25713 68 aa6.29□□□□□ -1.4
CCDC61-207ENST00000599044 KRTAP5-1Q6L8H4 278 aa6.22□□□□□ -1.41
CCDC61-207ENST00000599044 LUZP6Q538Z0 58 aa5.88□□□□□ -1.47
CCDC61-207ENST00000599044 LCE1EQ5T753 118 aa5.82□□□□□ -1.48
CCDC61-207ENST00000599044 KRTAP4-2Q9BYR5 136 aa5.58□□□□□ -1.52
CCDC61-207ENST00000599044 LCE1BQ5T7P3 118 aa5.55□□□□□ -1.52
CCDC61-207ENST00000599044 LCE1CQ5T751 118 aa5.42□□□□□ -1.54
CCDC61-207ENST00000599044 NDUFAF8A1L188 74 aa5.33□□□□□ -1.56
CCDC61-207ENST00000599044 LCE3DQ9BYE3 92 aa5.28□□□□□ -1.56
CCDC61-207ENST00000599044 KRTAP4-12Q9BQ66 201 aa5.17□□□□□ -1.58
CCDC61-207ENST00000599044 LCE3EQ5T5B0 92 aa5.07□□□□□ -1.6
CCDC61-207ENST00000599044 KRTAP5-11Q6L8G4 156 aa4.92□□□□□ -1.62
CCDC61-207ENST00000599044 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.9□□□□□ -1.63
CCDC61-207ENST00000599044 LCE1FQ5T754 118 aa4.86□□□□□ -1.63
CCDC61-207ENST00000599044 KRTAP21-2Q3LI59 83 aa4.56□□□□□ -1.68
CCDC61-207ENST00000599044 PHGR1C9JFL3 82 aa4.54□□□□□ -1.68
CCDC61-207ENST00000599044 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
CCDC61-207ENST00000599044 INE1O15225 51 aa4.31□□□□□ -1.72
CCDC61-207ENST00000599044 KRTAP4-4Q9BYR3 166 aa4.25□□□□□ -1.73
CCDC61-207ENST00000599044 PRM1P04553 51 aa4.14□□□□□ -1.75
CCDC61-207ENST00000599044 MUC19Q7Z5P9 8384 aa4.07□□□□□ -1.76
CCDC61-207ENST00000599044 KRTAP21-1Q3LI58 79 aa3.46□□□□□ -1.86
CCDC61-207ENST00000599044 H3BS24 57 aa3.44□□□□□ -1.86
CCDC61-207ENST00000599044 MUC16Q8WXI7 14507 aa2.88□□□□□ -1.95
Retrieved 78 of 20,778 RNA–protein pairs in 30.5 ms