RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 LCE1AQ5T7P2 110 aa7.62□□□□□ -1.19
IRF3-221ENST00000598808 KRTAP2-3P0C7H8 128 aa7.55□□□□□ -1.2
IRF3-221ENST00000598808 KRTAP2-4Q9BYR9 128 aa7.55□□□□□ -1.2
IRF3-221ENST00000598808 LCE3AQ5TA76 89 aa7.53□□□□□ -1.2
IRF3-221ENST00000598808 KRTAP19-7Q3SYF9 63 aa7.49□□□□□ -1.21
IRF3-221ENST00000598808 KRTAP19-5Q3LI72 72 aa7.47□□□□□ -1.21
IRF3-221ENST00000598808 MT1EP04732 61 aa7.43□□□□□ -1.22
IRF3-221ENST00000598808 SPRR2DP22532 72 aa7.43□□□□□ -1.22
IRF3-221ENST00000598808 KRTAP2-2Q9BYT5 123 aa7.31□□□□□ -1.24
IRF3-221ENST00000598808 KRTAP2-1Q9BYU5 128 aa7.31□□□□□ -1.24
IRF3-221ENST00000598808 KRTAP19-3Q7Z4W3 81 aa7.3□□□□□ -1.24
IRF3-221ENST00000598808 KRTAP12-3P60328 96 aa7.29□□□□□ -1.24
IRF3-221ENST00000598808 KRTAP15-1Q3LI76 137 aa7.25□□□□□ -1.25
IRF3-221ENST00000598808 LCE3BQ5TA77 95 aa7.23□□□□□ -1.25
IRF3-221ENST00000598808 LCE5AQ5TCM9 118 aa7.22□□□□□ -1.25
IRF3-221ENST00000598808 MT1LQ93083 61 aa7.17□□□□□ -1.26
IRF3-221ENST00000598808 MT1GP13640 62 aa7.14□□□□□ -1.27
IRF3-221ENST00000598808 KRTAP19-4Q3LI73 84 aa7.11□□□□□ -1.27
IRF3-221ENST00000598808 A0A0A0MQY5 61 aa7.1□□□□□ -1.27
IRF3-221ENST00000598808 MT1MQ8N339 61 aa7.05□□□□□ -1.28
IRF3-221ENST00000598808 SPRR5A0A1B0GTR4 108 aa7.03□□□□□ -1.28
IRF3-221ENST00000598808 DSTQ03001 7570 aaKnown RBP6.99□□□□□ -1.29
IRF3-221ENST00000598808 LUZP6Q538Z0 58 aa6.91□□□□□ -1.3
IRF3-221ENST00000598808 KRTAP4-3Q9BYR4 195 aa6.91□□□□□ -1.3
IRF3-221ENST00000598808 KRTAP4-7Q9BYR0 210 aa6.87□□□□□ -1.31
IRF3-221ENST00000598808 LCE3CQ5T5A8 94 aa6.82□□□□□ -1.32
IRF3-221ENST00000598808 KRTAP4-9Q9BYQ8 210 aa6.73□□□□□ -1.33
IRF3-221ENST00000598808 NDUFAF8A1L188 74 aa6.71□□□□□ -1.34
IRF3-221ENST00000598808 LCE1DQ5T752 114 aa6.59□□□□□ -1.36
IRF3-221ENST00000598808 LCE4AQ5TA78 99 aa6.57□□□□□ -1.36
IRF3-221ENST00000598808 GPR98Q8WXG9 6306 aa6.52□□□□□ -1.37
IRF3-221ENST00000598808 HMCN1Q96RW7 5635 aa6.51□□□□□ -1.37
IRF3-221ENST00000598808 KRTAP5-4Q6L8H1 288 aa6.5□□□□□ -1.37
IRF3-221ENST00000598808 LOC100996750A0A140TA64 210 aa6.49□□□□□ -1.37
IRF3-221ENST00000598808 MT4P47944 62 aa6.49□□□□□ -1.37
IRF3-221ENST00000598808 KRTAP4-6Q9BYQ5 205 aa6.48□□□□□ -1.37
IRF3-221ENST00000598808 KRTAP5-5Q701N2 237 aaPredicted RBP6.37□□□□□ -1.39
IRF3-221ENST00000598808 KRTAP9-6A8MVA2 160 aa6.35□□□□□ -1.39
IRF3-221ENST00000598808 KRTAP4-12Q9BQ66 201 aa6.32□□□□□ -1.4
IRF3-221ENST00000598808 AHNAK2Q8IVF2 5795 aa6.28□□□□□ -1.4
IRF3-221ENST00000598808 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
IRF3-221ENST00000598808 SYNE1Q8NF91 8797 aaKnown RBP6.14□□□□□ -1.43
IRF3-221ENST00000598808 KRTAP9-4Q9BYQ2 154 aa6.14□□□□□ -1.43
IRF3-221ENST00000598808 KRTAP20-2Q3LI61 65 aa6.12□□□□□ -1.43
IRF3-221ENST00000598808 MT1AP04731 61 aa6.1□□□□□ -1.43
IRF3-221ENST00000598808 KRTAP5-10Q6L8G5 202 aa6.09□□□□□ -1.43
IRF3-221ENST00000598808 KRTAP9-9Q9BYP9 154 aa6.07□□□□□ -1.44
IRF3-221ENST00000598808 KRTAP6-1Q3LI64 71 aa6.06□□□□□ -1.44
IRF3-221ENST00000598808 KRTAP5-3Q6L8H2 238 aa5.96□□□□□ -1.46
IRF3-221ENST00000598808 KRTAP5-7Q6L8G8 165 aa5.83□□□□□ -1.48
IRF3-221ENST00000598808 KRTAP6-2Q3LI66 62 aa5.73□□□□□ -1.49
IRF3-221ENST00000598808 KRTAP5-2Q701N4 177 aa5.72□□□□□ -1.49
IRF3-221ENST00000598808 INE1O15225 51 aa5.7□□□□□ -1.5
IRF3-221ENST00000598808 MT3P25713 68 aa5.58□□□□□ -1.52
IRF3-221ENST00000598808 KRTAP4-11Q9BYQ6 195 aa5.56□□□□□ -1.52
IRF3-221ENST00000598808 KRTAP5-8O75690 187 aa5.39□□□□□ -1.55
IRF3-221ENST00000598808 OBSCNQ5VST9 7968 aa5.32□□□□□ -1.56
IRF3-221ENST00000598808 LCE3DQ9BYE3 92 aa5.16□□□□□ -1.58
IRF3-221ENST00000598808 MUC5BQ9HC84 5762 aaPredicted RBP5.13□□□□□ -1.59
IRF3-221ENST00000598808 KRTAP5-1Q6L8H4 278 aa5.12□□□□□ -1.59
IRF3-221ENST00000598808 AHNAKQ09666 5890 aaKnown RBP5.09□□□□□ -1.6
IRF3-221ENST00000598808 MUC5ACP98088 5654 aa5.08□□□□□ -1.6
IRF3-221ENST00000598808 KRTAP4-2Q9BYR5 136 aa5.07□□□□□ -1.6
IRF3-221ENST00000598808 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
IRF3-221ENST00000598808 LCE1EQ5T753 118 aa4.96□□□□□ -1.62
IRF3-221ENST00000598808 LCE1BQ5T7P3 118 aa4.78□□□□□ -1.64
IRF3-221ENST00000598808 LCE1FQ5T754 118 aa4.63□□□□□ -1.67
IRF3-221ENST00000598808 LCE1CQ5T751 118 aa4.62□□□□□ -1.67
IRF3-221ENST00000598808 PRM1P04553 51 aa4.39□□□□□ -1.71
IRF3-221ENST00000598808 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
IRF3-221ENST00000598808 KRTAP5-11Q6L8G4 156 aa4.15□□□□□ -1.75
IRF3-221ENST00000598808 KRTAP21-2Q3LI59 83 aa3.94□□□□□ -1.78
IRF3-221ENST00000598808 KRTAP4-4Q9BYR3 166 aa3.65□□□□□ -1.83
IRF3-221ENST00000598808 PHGR1C9JFL3 82 aa3.57□□□□□ -1.84
IRF3-221ENST00000598808 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
IRF3-221ENST00000598808 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
IRF3-221ENST00000598808 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 6.1 ms