RNA–Protein interactions for RNA: ENST00000598619.1

HMGN2P46-208, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, humanhuman

BASIC

Gene HMGN2P46, Length 490 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P46-208ENST00000598619 MT1EP04732 61 aa3.28□□□□□ -1.88
HMGN2P46-208ENST00000598619 KRTAP19-5Q3LI72 72 aa3.26□□□□□ -1.89
HMGN2P46-208ENST00000598619 KRTAP19-3Q7Z4W3 81 aa3.26□□□□□ -1.89
HMGN2P46-208ENST00000598619 TNP1P09430 55 aa3.25□□□□□ -1.89
HMGN2P46-208ENST00000598619 C10orf95Q9H7T3 257 aa3.25□□□□□ -1.89
HMGN2P46-208ENST00000598619 UQCR11O14957 56 aa3.24□□□□□ -1.89
HMGN2P46-208ENST00000598619 LCE3AQ5TA76 89 aa3.2□□□□□ -1.9
HMGN2P46-208ENST00000598619 H3BS24 57 aa3.19□□□□□ -1.9
HMGN2P46-208ENST00000598619 MT1GP13640 62 aa3.19□□□□□ -1.9
HMGN2P46-208ENST00000598619 MIR22HGQ0VDD5 57 aa3.18□□□□□ -1.9
HMGN2P46-208ENST00000598619 PP632Q6XCG6 107 aa3.18□□□□□ -1.9
HMGN2P46-208ENST00000598619 DSTQ03001 7570 aaKnown RBP3.16□□□□□ -1.9
HMGN2P46-208ENST00000598619 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.16□□□□□ -1.9
HMGN2P46-208ENST00000598619 PSPHP1O15172 72 aa3.14□□□□□ -1.91
HMGN2P46-208ENST00000598619 MT1LQ93083 61 aa3.14□□□□□ -1.91
HMGN2P46-208ENST00000598619 V9GYY9 64 aa3.14□□□□□ -1.91
HMGN2P46-208ENST00000598619 K7ERS5 55 aa3.13□□□□□ -1.91
HMGN2P46-208ENST00000598619 MT1MQ8N339 61 aa3.13□□□□□ -1.91
HMGN2P46-208ENST00000598619 Q1T7F1 81 aa3.1□□□□□ -1.91
HMGN2P46-208ENST00000598619 KRTAP12-3P60328 96 aa3.08□□□□□ -1.92
HMGN2P46-208ENST00000598619 KRTAP25-1Q3LHN0 102 aa3.07□□□□□ -1.92
HMGN2P46-208ENST00000598619 KRTAP4-3Q9BYR4 195 aa3.07□□□□□ -1.92
HMGN2P46-208ENST00000598619 A6NED7 52 aa3.04□□□□□ -1.92
HMGN2P46-208ENST00000598619 MT4P47944 62 aa3.01□□□□□ -1.93
HMGN2P46-208ENST00000598619 PCP4P48539 62 aa2.96□□□□□ -1.94
HMGN2P46-208ENST00000598619 RPS28P62857 69 aaKnown RBP2.95□□□□□ -1.94
HMGN2P46-208ENST00000598619 CDC42SE1Q9NRR8 79 aa2.95□□□□□ -1.94
HMGN2P46-208ENST00000598619 KRTAP5-11Q6L8G4 156 aa2.94□□□□□ -1.94
HMGN2P46-208ENST00000598619 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
HMGN2P46-208ENST00000598619 KRTAP23-1A1A580 65 aa2.93□□□□□ -1.94
HMGN2P46-208ENST00000598619 GPR98Q8WXG9 6306 aa2.91□□□□□ -1.94
HMGN2P46-208ENST00000598619 ROMO1P60602 79 aa2.9□□□□□ -1.95
HMGN2P46-208ENST00000598619 KRTAP15-1Q3LI76 137 aa2.9□□□□□ -1.95
HMGN2P46-208ENST00000598619 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.95
HMGN2P46-208ENST00000598619 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.95
HMGN2P46-208ENST00000598619 KRTAP5-5Q701N2 237 aaPredicted RBP2.84□□□□□ -1.95
HMGN2P46-208ENST00000598619 KRTAP12-4P60329 112 aa2.81□□□□□ -1.96
HMGN2P46-208ENST00000598619 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
HMGN2P46-208ENST00000598619 SPRR5A0A1B0GTR4 108 aa2.78□□□□□ -1.96
HMGN2P46-208ENST00000598619 AHNAK2Q8IVF2 5795 aa2.76□□□□□ -1.97
HMGN2P46-208ENST00000598619 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
HMGN2P46-208ENST00000598619 SYNE1Q8NF91 8797 aaKnown RBP2.73□□□□□ -1.97
HMGN2P46-208ENST00000598619 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
HMGN2P46-208ENST00000598619 MT1AP04731 61 aa2.68□□□□□ -1.98
HMGN2P46-208ENST00000598619 KRTAP6-1Q3LI64 71 aa2.66□□□□□ -1.98
HMGN2P46-208ENST00000598619 KRTAP5-1Q6L8H4 278 aa2.66□□□□□ -1.98
HMGN2P46-208ENST00000598619 KRTAP9-6A8MVA2 160 aa2.65□□□□□ -1.99
HMGN2P46-208ENST00000598619 KRTAP5-7Q6L8G8 165 aa2.64□□□□□ -1.99
HMGN2P46-208ENST00000598619 BRK1Q8WUW1 75 aa2.64□□□□□ -1.99
HMGN2P46-208ENST00000598619 KRTAP4-4Q9BYR3 166 aa2.58□□□□□ -2
HMGN2P46-208ENST00000598619 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
HMGN2P46-208ENST00000598619 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
HMGN2P46-208ENST00000598619 PRO0628Q9UI54 55 aa2.49□□□□□ -2.01
HMGN2P46-208ENST00000598619 PMAIP1Q13794 54 aa2.48□□□□□ -2.01
HMGN2P46-208ENST00000598619 MT3P25713 68 aa2.47□□□□□ -2.01
HMGN2P46-208ENST00000598619 A0A0A0MQY5 61 aa2.45□□□□□ -2.02
HMGN2P46-208ENST00000598619 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
HMGN2P46-208ENST00000598619 OBSCNQ5VST9 7968 aa2.41□□□□□ -2.02
HMGN2P46-208ENST00000598619 PRAC1Q96KF2 57 aa2.38□□□□□ -2.03
HMGN2P46-208ENST00000598619 MUC5ACP98088 5654 aa2.27□□□□□ -2.05
HMGN2P46-208ENST00000598619 MUC5BQ9HC84 5762 aaPredicted RBP2.26□□□□□ -2.05
HMGN2P46-208ENST00000598619 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
HMGN2P46-208ENST00000598619 KTN1-AS1Q86SY8 53 aa2.22□□□□□ -2.05
HMGN2P46-208ENST00000598619 LCE1BQ5T7P3 118 aa2.15□□□□□ -2.07
HMGN2P46-208ENST00000598619 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
HMGN2P46-208ENST00000598619 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
HMGN2P46-208ENST00000598619 LUZP6Q538Z0 58 aa2.03□□□□□ -2.08
HMGN2P46-208ENST00000598619 LCE3EQ5T5B0 92 aa1.95□□□□□ -2.1
HMGN2P46-208ENST00000598619 LCE1FQ5T754 118 aa1.81□□□□□ -2.12
HMGN2P46-208ENST00000598619 NDUFAF8A1L188 74 aa1.79□□□□□ -2.12
HMGN2P46-208ENST00000598619 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
HMGN2P46-208ENST00000598619 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
HMGN2P46-208ENST00000598619 INE1O15225 51 aa1.6□□□□□ -2.15
HMGN2P46-208ENST00000598619 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
HMGN2P46-208ENST00000598619 PRM1P04553 51 aa1.49□□□□□ -2.17
HMGN2P46-208ENST00000598619 KRTAP21-1Q3LI58 79 aa1.23□□□□□ -2.21
HMGN2P46-208ENST00000598619 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 39 ms