RNA–Protein interactions for RNA: ENST00000596957.1

ARHGEF1-214, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-214ENST00000596957 PMAIP1Q13794 54 aa5.45□□□□□ -1.54
ARHGEF1-214ENST00000596957 PP632Q6XCG6 107 aa5.43□□□□□ -1.54
ARHGEF1-214ENST00000596957 SPRR2DP22532 72 aa5.4□□□□□ -1.54
ARHGEF1-214ENST00000596957 KRTAP19-3Q7Z4W3 81 aa5.39□□□□□ -1.55
ARHGEF1-214ENST00000596957 PRO0628Q9UI54 55 aa5.38□□□□□ -1.55
ARHGEF1-214ENST00000596957 KRTAP2-3P0C7H8 128 aa5.36□□□□□ -1.55
ARHGEF1-214ENST00000596957 KRTAP2-4Q9BYR9 128 aa5.36□□□□□ -1.55
ARHGEF1-214ENST00000596957 MT1LQ93083 61 aa5.34□□□□□ -1.55
ARHGEF1-214ENST00000596957 LCE5AQ5TCM9 118 aa5.32□□□□□ -1.56
ARHGEF1-214ENST00000596957 MT1GP13640 62 aa5.31□□□□□ -1.56
ARHGEF1-214ENST00000596957 KRTAP15-1Q3LI76 137 aa5.23□□□□□ -1.57
ARHGEF1-214ENST00000596957 MT1MQ8N339 61 aa5.22□□□□□ -1.57
ARHGEF1-214ENST00000596957 LCE3BQ5TA77 95 aa5.2□□□□□ -1.58
ARHGEF1-214ENST00000596957 KRTAP2-2Q9BYT5 123 aa5.17□□□□□ -1.58
ARHGEF1-214ENST00000596957 KRTAP2-1Q9BYU5 128 aa5.17□□□□□ -1.58
ARHGEF1-214ENST00000596957 PRAC1Q96KF2 57 aa5.13□□□□□ -1.59
ARHGEF1-214ENST00000596957 KRTAP19-4Q3LI73 84 aa5.12□□□□□ -1.59
ARHGEF1-214ENST00000596957 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
ARHGEF1-214ENST00000596957 KRTAP4-3Q9BYR4 195 aa5.09□□□□□ -1.59
ARHGEF1-214ENST00000596957 KTN1-AS1Q86SY8 53 aa5.06□□□□□ -1.6
ARHGEF1-214ENST00000596957 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
ARHGEF1-214ENST00000596957 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
ARHGEF1-214ENST00000596957 GPR98Q8WXG9 6306 aa4.99□□□□□ -1.61
ARHGEF1-214ENST00000596957 SVIPQ8NHG7 77 aa4.89□□□□□ -1.63
ARHGEF1-214ENST00000596957 LOC100996750A0A140TA64 210 aa4.82□□□□□ -1.64
ARHGEF1-214ENST00000596957 LCE4AQ5TA78 99 aa4.76□□□□□ -1.65
ARHGEF1-214ENST00000596957 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
ARHGEF1-214ENST00000596957 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
ARHGEF1-214ENST00000596957 MT4P47944 62 aa4.7□□□□□ -1.66
ARHGEF1-214ENST00000596957 KRTAP5-5Q701N2 237 aaPredicted RBP4.7□□□□□ -1.66
ARHGEF1-214ENST00000596957 KRTAP5-4Q6L8H1 288 aa4.69□□□□□ -1.66
ARHGEF1-214ENST00000596957 LCE1DQ5T752 114 aa4.65□□□□□ -1.67
ARHGEF1-214ENST00000596957 KRTAP12-4P60329 112 aa4.57□□□□□ -1.68
ARHGEF1-214ENST00000596957 HMCN1Q96RW7 5635 aa4.56□□□□□ -1.68
ARHGEF1-214ENST00000596957 MT1AP04731 61 aa4.55□□□□□ -1.68
ARHGEF1-214ENST00000596957 KRTAP4-6Q9BYQ5 205 aa4.55□□□□□ -1.68
ARHGEF1-214ENST00000596957 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
ARHGEF1-214ENST00000596957 KRTAP6-1Q3LI64 71 aa4.49□□□□□ -1.69
ARHGEF1-214ENST00000596957 AHNAK2Q8IVF2 5795 aa4.49□□□□□ -1.69
ARHGEF1-214ENST00000596957 KRTAP5-10Q6L8G5 202 aa4.47□□□□□ -1.69
ARHGEF1-214ENST00000596957 KRTAP20-2Q3LI61 65 aa4.44□□□□□ -1.7
ARHGEF1-214ENST00000596957 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
ARHGEF1-214ENST00000596957 KRTAP5-7Q6L8G8 165 aa4.35□□□□□ -1.71
ARHGEF1-214ENST00000596957 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
ARHGEF1-214ENST00000596957 LUZP6Q538Z0 58 aa4.33□□□□□ -1.72
ARHGEF1-214ENST00000596957 KRTAP5-3Q6L8H2 238 aa4.26□□□□□ -1.73
ARHGEF1-214ENST00000596957 KRTAP6-2Q3LI66 62 aa4.24□□□□□ -1.73
ARHGEF1-214ENST00000596957 KRTAP5-2Q701N4 177 aa4.18□□□□□ -1.74
ARHGEF1-214ENST00000596957 MT3P25713 68 aa4.17□□□□□ -1.74
ARHGEF1-214ENST00000596957 KRTAP4-11Q9BYQ6 195 aa3.95□□□□□ -1.78
ARHGEF1-214ENST00000596957 NDUFAF8A1L188 74 aa3.87□□□□□ -1.79
ARHGEF1-214ENST00000596957 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
ARHGEF1-214ENST00000596957 KRTAP5-8O75690 187 aa3.79□□□□□ -1.8
ARHGEF1-214ENST00000596957 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
ARHGEF1-214ENST00000596957 MUC5ACP98088 5654 aa3.74□□□□□ -1.81
ARHGEF1-214ENST00000596957 LCE3DQ9BYE3 92 aa3.74□□□□□ -1.81
ARHGEF1-214ENST00000596957 MUC5BQ9HC84 5762 aaPredicted RBP3.74□□□□□ -1.81
ARHGEF1-214ENST00000596957 LCE1EQ5T753 118 aa3.68□□□□□ -1.82
ARHGEF1-214ENST00000596957 KRTAP5-1Q6L8H4 278 aa3.67□□□□□ -1.82
ARHGEF1-214ENST00000596957 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
ARHGEF1-214ENST00000596957 KRTAP9-9Q9BYP9 154 aa3.58□□□□□ -1.84
ARHGEF1-214ENST00000596957 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
ARHGEF1-214ENST00000596957 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
ARHGEF1-214ENST00000596957 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
ARHGEF1-214ENST00000596957 A0A0A0MQY5 61 aa3.32□□□□□ -1.88
ARHGEF1-214ENST00000596957 INE1O15225 51 aa3.17□□□□□ -1.9
ARHGEF1-214ENST00000596957 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
ARHGEF1-214ENST00000596957 KRTAP5-11Q6L8G4 156 aa3.06□□□□□ -1.92
ARHGEF1-214ENST00000596957 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
ARHGEF1-214ENST00000596957 PRM1P04553 51 aa2.94□□□□□ -1.94
ARHGEF1-214ENST00000596957 KRTAP21-2Q3LI59 83 aa2.93□□□□□ -1.94
ARHGEF1-214ENST00000596957 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
ARHGEF1-214ENST00000596957 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
ARHGEF1-214ENST00000596957 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
ARHGEF1-214ENST00000596957 H3BS24 57 aa2.62□□□□□ -1.99
ARHGEF1-214ENST00000596957 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
ARHGEF1-214ENST00000596957 KRTAP21-1Q3LI58 79 aa1.96□□□□□ -2.1
ARHGEF1-214ENST00000596957 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms