RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 SPRR2AP35326 72 aa5.96□□□□□ -1.46
USE1-206ENST00000595101 LCE1AQ5T7P2 110 aa5.93□□□□□ -1.46
USE1-206ENST00000595101 KRTAP20-1Q3LI63 56 aa5.85□□□□□ -1.47
USE1-206ENST00000595101 INE1O15225 51 aa5.84□□□□□ -1.47
USE1-206ENST00000595101 C10orf95Q9H7T3 257 aa5.8□□□□□ -1.48
USE1-206ENST00000595101 KRTAP19-7Q3SYF9 63 aa5.79□□□□□ -1.48
USE1-206ENST00000595101 KRTAP2-3P0C7H8 128 aa5.75□□□□□ -1.49
USE1-206ENST00000595101 SPRR2DP22532 72 aa5.75□□□□□ -1.49
USE1-206ENST00000595101 KRTAP2-4Q9BYR9 128 aa5.75□□□□□ -1.49
USE1-206ENST00000595101 MT1EP04732 61 aa5.71□□□□□ -1.5
USE1-206ENST00000595101 KRTAP19-5Q3LI72 72 aa5.7□□□□□ -1.5
USE1-206ENST00000595101 TNP1P09430 55 aa5.66□□□□□ -1.5
USE1-206ENST00000595101 LCE3AQ5TA76 89 aa5.65□□□□□ -1.5
USE1-206ENST00000595101 LCE5AQ5TCM9 118 aa5.61□□□□□ -1.51
USE1-206ENST00000595101 KRTAP19-3Q7Z4W3 81 aa5.6□□□□□ -1.51
USE1-206ENST00000595101 KRTAP2-2Q9BYT5 123 aa5.59□□□□□ -1.51
USE1-206ENST00000595101 KRTAP2-1Q9BYU5 128 aa5.59□□□□□ -1.51
USE1-206ENST00000595101 LCE3BQ5TA77 95 aa5.58□□□□□ -1.52
USE1-206ENST00000595101 DSTQ03001 7570 aaKnown RBP5.53□□□□□ -1.52
USE1-206ENST00000595101 MT1LQ93083 61 aa5.5□□□□□ -1.53
USE1-206ENST00000595101 MT1GP13640 62 aa5.47□□□□□ -1.53
USE1-206ENST00000595101 KRTAP9-4Q9BYQ2 154 aa5.45□□□□□ -1.54
USE1-206ENST00000595101 MT1MQ8N339 61 aa5.42□□□□□ -1.54
USE1-206ENST00000595101 KRTAP12-3P60328 96 aa5.4□□□□□ -1.54
USE1-206ENST00000595101 PP632Q6XCG6 107 aa5.39□□□□□ -1.55
USE1-206ENST00000595101 KRTAP4-3Q9BYR4 195 aa5.37□□□□□ -1.55
USE1-206ENST00000595101 SPRR5A0A1B0GTR4 108 aa5.34□□□□□ -1.56
USE1-206ENST00000595101 LCE4AQ5TA78 99 aa5.32□□□□□ -1.56
USE1-206ENST00000595101 KRTAP4-7Q9BYR0 210 aa5.32□□□□□ -1.56
USE1-206ENST00000595101 KRTAP9-9Q9BYP9 154 aa5.3□□□□□ -1.56
USE1-206ENST00000595101 KRTAP4-9Q9BYQ8 210 aa5.21□□□□□ -1.57
USE1-206ENST00000595101 LCE1DQ5T752 114 aa5.08□□□□□ -1.6
USE1-206ENST00000595101 MT4P47944 62 aa5.06□□□□□ -1.6
USE1-206ENST00000595101 KRTAP5-4Q6L8H1 288 aa5.04□□□□□ -1.6
USE1-206ENST00000595101 HMCN1Q96RW7 5635 aa5.04□□□□□ -1.6
USE1-206ENST00000595101 LOC100996750A0A140TA64 210 aa5.03□□□□□ -1.6
USE1-206ENST00000595101 LCE3CQ5T5A8 94 aa5□□□□□ -1.61
USE1-206ENST00000595101 KRTAP4-6Q9BYQ5 205 aa4.96□□□□□ -1.61
USE1-206ENST00000595101 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
USE1-206ENST00000595101 KRTAP4-12Q9BQ66 201 aa4.94□□□□□ -1.62
USE1-206ENST00000595101 SYNE1Q8NF91 8797 aaKnown RBP4.8□□□□□ -1.64
USE1-206ENST00000595101 KRTAP9-6A8MVA2 160 aa4.79□□□□□ -1.64
USE1-206ENST00000595101 GPR98Q8WXG9 6306 aa4.79□□□□□ -1.64
USE1-206ENST00000595101 KRTAP20-2Q3LI61 65 aa4.76□□□□□ -1.65
USE1-206ENST00000595101 AHNAK2Q8IVF2 5795 aa4.74□□□□□ -1.65
USE1-206ENST00000595101 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
USE1-206ENST00000595101 KRTAP6-1Q3LI64 71 aa4.66□□□□□ -1.66
USE1-206ENST00000595101 MT1AP04731 61 aa4.64□□□□□ -1.67
USE1-206ENST00000595101 KRTAP5-3Q6L8H2 238 aa4.62□□□□□ -1.67
USE1-206ENST00000595101 MT3P25713 68 aa4.61□□□□□ -1.67
USE1-206ENST00000595101 KRTAP5-10Q6L8G5 202 aa4.6□□□□□ -1.67
USE1-206ENST00000595101 LCE1FQ5T754 118 aa4.53□□□□□ -1.68
USE1-206ENST00000595101 KRTAP5-2Q701N4 177 aa4.45□□□□□ -1.7
USE1-206ENST00000595101 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
USE1-206ENST00000595101 KRTAP5-7Q6L8G8 165 aa4.37□□□□□ -1.71
USE1-206ENST00000595101 KRTAP4-11Q9BYQ6 195 aa4.3□□□□□ -1.72
USE1-206ENST00000595101 OBSCNQ5VST9 7968 aa4.26□□□□□ -1.73
USE1-206ENST00000595101 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
USE1-206ENST00000595101 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
USE1-206ENST00000595101 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
USE1-206ENST00000595101 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
USE1-206ENST00000595101 LCE3EQ5T5B0 92 aa3.86□□□□□ -1.79
USE1-206ENST00000595101 LCE1EQ5T753 118 aa3.81□□□□□ -1.8
USE1-206ENST00000595101 AHNAKQ09666 5890 aaKnown RBP3.8□□□□□ -1.8
USE1-206ENST00000595101 KRTAP4-2Q9BYR5 136 aa3.75□□□□□ -1.81
USE1-206ENST00000595101 LCE1BQ5T7P3 118 aa3.65□□□□□ -1.83
USE1-206ENST00000595101 LCE3DQ9BYE3 92 aa3.63□□□□□ -1.83
USE1-206ENST00000595101 LCE1CQ5T751 118 aa3.56□□□□□ -1.84
USE1-206ENST00000595101 PRM1P04553 51 aa3.28□□□□□ -1.89
USE1-206ENST00000595101 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
USE1-206ENST00000595101 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
USE1-206ENST00000595101 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
USE1-206ENST00000595101 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
USE1-206ENST00000595101 PHGR1C9JFL3 82 aa2.78□□□□□ -1.96
USE1-206ENST00000595101 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
USE1-206ENST00000595101 KRTAP21-1Q3LI58 79 aa2.39□□□□□ -2.03
USE1-206ENST00000595101 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 49.1 ms