RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 MT1GP13640 62 aa7.86□□□□□ -1.15
HOMER3-206ENST00000594439 A6NED7 52 aa7.84□□□□□ -1.15
HOMER3-206ENST00000594439 MT1LQ93083 61 aa7.83□□□□□ -1.16
HOMER3-206ENST00000594439 KRTAP25-1Q3LHN0 102 aa7.78□□□□□ -1.16
HOMER3-206ENST00000594439 PP632Q6XCG6 107 aa7.76□□□□□ -1.17
HOMER3-206ENST00000594439 DSTQ03001 7570 aaKnown RBP7.76□□□□□ -1.17
HOMER3-206ENST00000594439 MT1MQ8N339 61 aa7.74□□□□□ -1.17
HOMER3-206ENST00000594439 KRTAP12-3P60328 96 aa7.7□□□□□ -1.18
HOMER3-206ENST00000594439 KRTAP4-3Q9BYR4 195 aa7.56□□□□□ -1.2
HOMER3-206ENST00000594439 CDC42SE1Q9NRR8 79 aa7.54□□□□□ -1.2
HOMER3-206ENST00000594439 KRTAP23-1A1A580 65 aa7.51□□□□□ -1.21
HOMER3-206ENST00000594439 KRTAP4-7Q9BYR0 210 aa7.46□□□□□ -1.22
HOMER3-206ENST00000594439 ROMO1P60602 79 aa7.45□□□□□ -1.22
HOMER3-206ENST00000594439 KRTAP4-9Q9BYQ8 210 aa7.38□□□□□ -1.23
HOMER3-206ENST00000594439 GPR98Q8WXG9 6306 aa7.36□□□□□ -1.23
HOMER3-206ENST00000594439 LCE4AQ5TA78 99 aa7.31□□□□□ -1.24
HOMER3-206ENST00000594439 KRTAP15-1Q3LI76 137 aa7.29□□□□□ -1.24
HOMER3-206ENST00000594439 KRTAP19-4Q3LI73 84 aa7.27□□□□□ -1.25
HOMER3-206ENST00000594439 LCE1DQ5T752 114 aa7.24□□□□□ -1.25
HOMER3-206ENST00000594439 KRTAP5-4Q6L8H1 288 aa7.24□□□□□ -1.25
HOMER3-206ENST00000594439 MT4P47944 62 aa7.18□□□□□ -1.26
HOMER3-206ENST00000594439 LCE3CQ5T5A8 94 aa7.13□□□□□ -1.27
HOMER3-206ENST00000594439 HMCN1Q96RW7 5635 aa7.11□□□□□ -1.27
HOMER3-206ENST00000594439 KRTAP5-5Q701N2 237 aaPredicted RBP7.08□□□□□ -1.28
HOMER3-206ENST00000594439 LOC100996750A0A140TA64 210 aa7.05□□□□□ -1.28
HOMER3-206ENST00000594439 KRTAP4-6Q9BYQ5 205 aa7.03□□□□□ -1.28
HOMER3-206ENST00000594439 BRK1Q8WUW1 75 aa6.98□□□□□ -1.29
HOMER3-206ENST00000594439 AHNAK2Q8IVF2 5795 aa6.84□□□□□ -1.31
HOMER3-206ENST00000594439 SYNE1Q8NF91 8797 aaKnown RBP6.81□□□□□ -1.32
HOMER3-206ENST00000594439 SPRR5A0A1B0GTR4 108 aa6.81□□□□□ -1.32
HOMER3-206ENST00000594439 KRTAP20-2Q3LI61 65 aa6.81□□□□□ -1.32
HOMER3-206ENST00000594439 KRTAP12-4P60329 112 aa6.79□□□□□ -1.32
HOMER3-206ENST00000594439 KRTAP9-6A8MVA2 160 aa6.75□□□□□ -1.33
HOMER3-206ENST00000594439 MT1AP04731 61 aa6.66□□□□□ -1.34
HOMER3-206ENST00000594439 KRTAP5-3Q6L8H2 238 aa6.62□□□□□ -1.35
HOMER3-206ENST00000594439 KRTAP6-1Q3LI64 71 aa6.61□□□□□ -1.35
HOMER3-206ENST00000594439 KRTAP5-10Q6L8G5 202 aa6.61□□□□□ -1.35
HOMER3-206ENST00000594439 PMAIP1Q13794 54 aa6.56□□□□□ -1.36
HOMER3-206ENST00000594439 KRTAP9-4Q9BYQ2 154 aa6.41□□□□□ -1.38
HOMER3-206ENST00000594439 KRTAP5-2Q701N4 177 aa6.4□□□□□ -1.38
HOMER3-206ENST00000594439 KRTAP5-7Q6L8G8 165 aa6.35□□□□□ -1.39
HOMER3-206ENST00000594439 PRAC1Q96KF2 57 aa6.31□□□□□ -1.4
HOMER3-206ENST00000594439 KRTAP6-2Q3LI66 62 aa6.26□□□□□ -1.41
HOMER3-206ENST00000594439 PRO0628Q9UI54 55 aa6.26□□□□□ -1.41
HOMER3-206ENST00000594439 KRTAP4-11Q9BYQ6 195 aa6.14□□□□□ -1.43
HOMER3-206ENST00000594439 MT3P25713 68 aa6.07□□□□□ -1.44
HOMER3-206ENST00000594439 KRTAP5-8O75690 187 aa5.95□□□□□ -1.46
HOMER3-206ENST00000594439 KTN1-AS1Q86SY8 53 aa5.95□□□□□ -1.46
HOMER3-206ENST00000594439 OBSCNQ5VST9 7968 aa5.89□□□□□ -1.47
HOMER3-206ENST00000594439 KRTAP5-1Q6L8H4 278 aa5.69□□□□□ -1.5
HOMER3-206ENST00000594439 SVIPQ8NHG7 77 aa5.65□□□□□ -1.5
HOMER3-206ENST00000594439 AHNAKQ09666 5890 aaKnown RBP5.65□□□□□ -1.51
HOMER3-206ENST00000594439 MUC5ACP98088 5654 aa5.62□□□□□ -1.51
HOMER3-206ENST00000594439 KRTAP9-9Q9BYP9 154 aa5.56□□□□□ -1.52
HOMER3-206ENST00000594439 MUC5BQ9HC84 5762 aaPredicted RBP5.55□□□□□ -1.52
HOMER3-206ENST00000594439 LCE1EQ5T753 118 aa5.52□□□□□ -1.53
HOMER3-206ENST00000594439 LUZP6Q538Z0 58 aa5.24□□□□□ -1.57
HOMER3-206ENST00000594439 KRTAP4-2Q9BYR5 136 aa5.22□□□□□ -1.57
HOMER3-206ENST00000594439 LCE1BQ5T7P3 118 aa5.17□□□□□ -1.58
HOMER3-206ENST00000594439 LCE3DQ9BYE3 92 aa5.17□□□□□ -1.58
HOMER3-206ENST00000594439 LCE1CQ5T751 118 aa5.12□□□□□ -1.59
HOMER3-206ENST00000594439 LCE3EQ5T5B0 92 aa4.91□□□□□ -1.62
HOMER3-206ENST00000594439 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.71□□□□□ -1.66
HOMER3-206ENST00000594439 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
HOMER3-206ENST00000594439 KRTAP4-12Q9BQ66 201 aa4.62□□□□□ -1.67
HOMER3-206ENST00000594439 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
HOMER3-206ENST00000594439 LCE1FQ5T754 118 aa4.43□□□□□ -1.7
HOMER3-206ENST00000594439 KRTAP21-2Q3LI59 83 aa4.36□□□□□ -1.71
HOMER3-206ENST00000594439 PHGR1C9JFL3 82 aa3.98□□□□□ -1.77
HOMER3-206ENST00000594439 H3BS24 57 aa3.95□□□□□ -1.78
HOMER3-206ENST00000594439 KRTAP4-4Q9BYR3 166 aa3.95□□□□□ -1.78
HOMER3-206ENST00000594439 A0A0A0MQY5 61 aa3.94□□□□□ -1.78
HOMER3-206ENST00000594439 PRM1P04553 51 aa3.82□□□□□ -1.8
HOMER3-206ENST00000594439 INE1O15225 51 aa3.72□□□□□ -1.81
HOMER3-206ENST00000594439 MUC19Q7Z5P9 8384 aa3.65□□□□□ -1.82
HOMER3-206ENST00000594439 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
HOMER3-206ENST00000594439 MUC16Q8WXI7 14507 aa2.65□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 6.7 ms