RNA–Protein interactions for RNA: ENST00000593409.5

SMIM7-211, Transcript of small integral membrane protein 7, humanhuman

TSL 5

Gene SMIM7, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-211ENST00000593409 KRTAP10-7P60409 375 aaPredicted RBP3.89□□□□□ -1.79
SMIM7-211ENST00000593409 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
SMIM7-211ENST00000593409 LCE3AQ5TA76 89 aa3.89□□□□□ -1.79
SMIM7-211ENST00000593409 LCE1AQ5T7P2 110 aa3.84□□□□□ -1.79
SMIM7-211ENST00000593409 KRTAP8-1Q8IUC2 63 aa3.84□□□□□ -1.79
SMIM7-211ENST00000593409 SSPOA2VEC9 5147 aa3.81□□□□□ -1.8
SMIM7-211ENST00000593409 KRTAP12-3P60328 96 aa3.76□□□□□ -1.81
SMIM7-211ENST00000593409 INE1O15225 51 aa3.74□□□□□ -1.81
SMIM7-211ENST00000593409 KRTAP19-5Q3LI72 72 aa3.69□□□□□ -1.82
SMIM7-211ENST00000593409 FSIP2Q5CZC0 6907 aa3.64□□□□□ -1.83
SMIM7-211ENST00000593409 CRCT1Q9UGL9 99 aa3.63□□□□□ -1.83
SMIM7-211ENST00000593409 KRTAP19-7Q3SYF9 63 aa3.62□□□□□ -1.83
SMIM7-211ENST00000593409 FCGBPQ9Y6R7 5405 aaPredicted RBP3.62□□□□□ -1.83
SMIM7-211ENST00000593409 SPRR5A0A1B0GTR4 108 aa3.59□□□□□ -1.83
SMIM7-211ENST00000593409 KMT2DO14686 5537 aa3.57□□□□□ -1.84
SMIM7-211ENST00000593409 MT1EP04732 61 aa3.56□□□□□ -1.84
SMIM7-211ENST00000593409 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
SMIM7-211ENST00000593409 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
SMIM7-211ENST00000593409 MT1LQ93083 61 aa3.51□□□□□ -1.85
SMIM7-211ENST00000593409 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
SMIM7-211ENST00000593409 MT3P25713 68 aa3.43□□□□□ -1.86
SMIM7-211ENST00000593409 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
SMIM7-211ENST00000593409 MT1GP13640 62 aa3.41□□□□□ -1.86
SMIM7-211ENST00000593409 KRTAP5-9P26371 169 aa3.4□□□□□ -1.86
SMIM7-211ENST00000593409 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.86
SMIM7-211ENST00000593409 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
SMIM7-211ENST00000593409 MT1MQ8N339 61 aa3.35□□□□□ -1.87
SMIM7-211ENST00000593409 KRTAP6-3Q3LI67 103 aa3.32□□□□□ -1.88
SMIM7-211ENST00000593409 MUC12Q9UKN1 5478 aa3.3□□□□□ -1.88
SMIM7-211ENST00000593409 KRTAP9-6A8MVA2 160 aa3.28□□□□□ -1.88
SMIM7-211ENST00000593409 SPRR2EP22531 72 aa3.26□□□□□ -1.89
SMIM7-211ENST00000593409 SPRR2BP35325 72 aa3.26□□□□□ -1.89
SMIM7-211ENST00000593409 SPRR2AP35326 72 aa3.26□□□□□ -1.89
SMIM7-211ENST00000593409 KRTAP4-3Q9BYR4 195 aa3.25□□□□□ -1.89
SMIM7-211ENST00000593409 SYNE2Q8WXH0 6885 aaKnown RBP3.22□□□□□ -1.89
SMIM7-211ENST00000593409 LCE1EQ5T753 118 aa3.19□□□□□ -1.9
SMIM7-211ENST00000593409 KRTAP5-11Q6L8G4 156 aa3.18□□□□□ -1.9
SMIM7-211ENST00000593409 SPRR2DP22532 72 aa3.15□□□□□ -1.91
SMIM7-211ENST00000593409 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
SMIM7-211ENST00000593409 MDN1Q9NU22 5596 aa3.15□□□□□ -1.91
SMIM7-211ENST00000593409 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
SMIM7-211ENST00000593409 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
SMIM7-211ENST00000593409 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
SMIM7-211ENST00000593409 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
SMIM7-211ENST00000593409 KRTAP5-5Q701N2 237 aaPredicted RBP3.02□□□□□ -1.93
SMIM7-211ENST00000593409 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
SMIM7-211ENST00000593409 MT1AP04731 61 aa2.99□□□□□ -1.93
SMIM7-211ENST00000593409 NEBP20929 6669 aa2.98□□□□□ -1.93
SMIM7-211ENST00000593409 KRTAP20-1Q3LI63 56 aa2.98□□□□□ -1.93
SMIM7-211ENST00000593409 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
SMIM7-211ENST00000593409 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
SMIM7-211ENST00000593409 KRTAP4-4Q9BYR3 166 aa2.82□□□□□ -1.96
SMIM7-211ENST00000593409 KRTAP12-4P60329 112 aa2.82□□□□□ -1.96
SMIM7-211ENST00000593409 KRTAP5-1Q6L8H4 278 aa2.82□□□□□ -1.96
SMIM7-211ENST00000593409 SYNE1Q8NF91 8797 aaKnown RBP2.8□□□□□ -1.96
SMIM7-211ENST00000593409 MT4P47944 62 aa2.7□□□□□ -1.98
SMIM7-211ENST00000593409 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
SMIM7-211ENST00000593409 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
SMIM7-211ENST00000593409 KRTAP20-2Q3LI61 65 aa2.66□□□□□ -1.98
SMIM7-211ENST00000593409 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
SMIM7-211ENST00000593409 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
SMIM7-211ENST00000593409 HMCN1Q96RW7 5635 aa2.57□□□□□ -2
SMIM7-211ENST00000593409 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
SMIM7-211ENST00000593409 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
SMIM7-211ENST00000593409 OBSCNQ5VST9 7968 aa2.44□□□□□ -2.02
SMIM7-211ENST00000593409 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
SMIM7-211ENST00000593409 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
SMIM7-211ENST00000593409 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
SMIM7-211ENST00000593409 MUC5BQ9HC84 5762 aaPredicted RBP2.27□□□□□ -2.05
SMIM7-211ENST00000593409 PRM1P04553 51 aa2.27□□□□□ -2.05
SMIM7-211ENST00000593409 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
SMIM7-211ENST00000593409 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
SMIM7-211ENST00000593409 MUC5ACP98088 5654 aa2.12□□□□□ -2.07
SMIM7-211ENST00000593409 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
SMIM7-211ENST00000593409 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
SMIM7-211ENST00000593409 PHGR1C9JFL3 82 aa1.64□□□□□ -2.15
SMIM7-211ENST00000593409 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
SMIM7-211ENST00000593409 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 187.5 ms