RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 KRTAP15-1Q3LI76 137 aa4.64□□□□□ -1.67
NPC1-214ENST00000593280 MACF1Q9UPN3 7388 aaKnown RBP4.63□□□□□ -1.67
NPC1-214ENST00000593280 SYNE2Q8WXH0 6885 aaKnown RBP4.61□□□□□ -1.67
NPC1-214ENST00000593280 KRTAP19-6Q3LI70 58 aa4.61□□□□□ -1.67
NPC1-214ENST00000593280 KMT2DO14686 5537 aa4.56□□□□□ -1.68
NPC1-214ENST00000593280 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
NPC1-214ENST00000593280 KRTAP6-3Q3LI67 103 aa4.53□□□□□ -1.68
NPC1-214ENST00000593280 LCE4AQ5TA78 99 aa4.49□□□□□ -1.69
NPC1-214ENST00000593280 KRTAP19-5Q3LI72 72 aa4.48□□□□□ -1.69
NPC1-214ENST00000593280 SPRR5A0A1B0GTR4 108 aa4.41□□□□□ -1.7
NPC1-214ENST00000593280 NEBP20929 6669 aa4.38□□□□□ -1.71
NPC1-214ENST00000593280 KRTAP19-7Q3SYF9 63 aa4.37□□□□□ -1.71
NPC1-214ENST00000593280 NDUFAF8A1L188 74 aa4.36□□□□□ -1.71
NPC1-214ENST00000593280 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
NPC1-214ENST00000593280 KRTAP20-1Q3LI63 56 aa4.31□□□□□ -1.72
NPC1-214ENST00000593280 MT1EP04732 61 aa4.29□□□□□ -1.72
NPC1-214ENST00000593280 LCE3CQ5T5A8 94 aa4.26□□□□□ -1.73
NPC1-214ENST00000593280 MT1LQ93083 61 aa4.24□□□□□ -1.73
NPC1-214ENST00000593280 KRTAP5-9P26371 169 aa4.22□□□□□ -1.73
NPC1-214ENST00000593280 KRTAP19-4Q3LI73 84 aa4.22□□□□□ -1.73
NPC1-214ENST00000593280 MUC12Q9UKN1 5478 aa4.22□□□□□ -1.73
NPC1-214ENST00000593280 KRTAP2-3P0C7H8 128 aa4.13□□□□□ -1.75
NPC1-214ENST00000593280 SPRR2FQ96RM1 72 aa4.13□□□□□ -1.75
NPC1-214ENST00000593280 KRTAP2-4Q9BYR9 128 aa4.13□□□□□ -1.75
NPC1-214ENST00000593280 KRTAP19-3Q7Z4W3 81 aa4.1□□□□□ -1.75
NPC1-214ENST00000593280 H3BS24 57 aa4.06□□□□□ -1.76
NPC1-214ENST00000593280 MT1GP13640 62 aa4.06□□□□□ -1.76
NPC1-214ENST00000593280 MDN1Q9NU22 5596 aa4.06□□□□□ -1.76
NPC1-214ENST00000593280 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.05□□□□□ -1.76
NPC1-214ENST00000593280 SPRR2EP22531 72 aa4.04□□□□□ -1.76
NPC1-214ENST00000593280 SPRR2BP35325 72 aa4.04□□□□□ -1.76
NPC1-214ENST00000593280 SPRR2AP35326 72 aa4.04□□□□□ -1.76
NPC1-214ENST00000593280 MT1MQ8N339 61 aa4.04□□□□□ -1.76
NPC1-214ENST00000593280 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
NPC1-214ENST00000593280 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
NPC1-214ENST00000593280 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
NPC1-214ENST00000593280 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
NPC1-214ENST00000593280 LCE1AQ5T7P2 110 aa3.94□□□□□ -1.78
NPC1-214ENST00000593280 SPRR2DP22532 72 aa3.92□□□□□ -1.78
NPC1-214ENST00000593280 A0A0A0MQY5 61 aa3.86□□□□□ -1.79
NPC1-214ENST00000593280 DSTQ03001 7570 aaKnown RBP3.83□□□□□ -1.8
NPC1-214ENST00000593280 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
NPC1-214ENST00000593280 KRTAP5-5Q701N2 237 aaPredicted RBP3.61□□□□□ -1.83
NPC1-214ENST00000593280 MT1AP04731 61 aa3.59□□□□□ -1.83
NPC1-214ENST00000593280 INE1O15225 51 aa3.59□□□□□ -1.84
NPC1-214ENST00000593280 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
NPC1-214ENST00000593280 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
NPC1-214ENST00000593280 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
NPC1-214ENST00000593280 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
NPC1-214ENST00000593280 MT4P47944 62 aa3.42□□□□□ -1.86
NPC1-214ENST00000593280 KRTAP5-1Q6L8H4 278 aa3.39□□□□□ -1.87
NPC1-214ENST00000593280 HMCN1Q96RW7 5635 aa3.37□□□□□ -1.87
NPC1-214ENST00000593280 KRTAP5-10Q6L8G5 202 aa3.36□□□□□ -1.87
NPC1-214ENST00000593280 AHNAK2Q8IVF2 5795 aa3.35□□□□□ -1.87
NPC1-214ENST00000593280 KRTAP12-4P60329 112 aa3.33□□□□□ -1.88
NPC1-214ENST00000593280 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
NPC1-214ENST00000593280 KRTAP5-7Q6L8G8 165 aa3.28□□□□□ -1.88
NPC1-214ENST00000593280 KRTAP6-2Q3LI66 62 aa3.26□□□□□ -1.89
NPC1-214ENST00000593280 MT3P25713 68 aa3.25□□□□□ -1.89
NPC1-214ENST00000593280 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
NPC1-214ENST00000593280 KRTAP20-2Q3LI61 65 aa3.17□□□□□ -1.9
NPC1-214ENST00000593280 LCE3EQ5T5B0 92 aa3.15□□□□□ -1.91
NPC1-214ENST00000593280 KRTAP5-2Q701N4 177 aa3.09□□□□□ -1.91
NPC1-214ENST00000593280 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
NPC1-214ENST00000593280 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
NPC1-214ENST00000593280 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
NPC1-214ENST00000593280 PRM1P04553 51 aa2.82□□□□□ -1.96
NPC1-214ENST00000593280 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
NPC1-214ENST00000593280 MUC5ACP98088 5654 aa2.8□□□□□ -1.96
NPC1-214ENST00000593280 MUC5BQ9HC84 5762 aaPredicted RBP2.77□□□□□ -1.97
NPC1-214ENST00000593280 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
NPC1-214ENST00000593280 LCE1CQ5T751 118 aa2.59□□□□□ -1.99
NPC1-214ENST00000593280 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
NPC1-214ENST00000593280 LCE1FQ5T754 118 aa2.08□□□□□ -2.08
NPC1-214ENST00000593280 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
NPC1-214ENST00000593280 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
NPC1-214ENST00000593280 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
NPC1-214ENST00000593280 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 65.5 ms