RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 A6NED7 52 aa6.48□□□□□ -1.37
CIRBP-243ENST00000593128 MT1GP13640 62 aa6.47□□□□□ -1.37
CIRBP-243ENST00000593128 PP632Q6XCG6 107 aa6.46□□□□□ -1.38
CIRBP-243ENST00000593128 LCE1DQ5T752 114 aa6.43□□□□□ -1.38
CIRBP-243ENST00000593128 MT4P47944 62 aa6.39□□□□□ -1.39
CIRBP-243ENST00000593128 MT1MQ8N339 61 aa6.39□□□□□ -1.39
CIRBP-243ENST00000593128 MT1LQ93083 61 aa6.35□□□□□ -1.39
CIRBP-243ENST00000593128 CDC42SE1Q9NRR8 79 aa6.34□□□□□ -1.39
CIRBP-243ENST00000593128 HMCN1Q96RW7 5635 aa6.34□□□□□ -1.39
CIRBP-243ENST00000593128 LCE4AQ5TA78 99 aa6.33□□□□□ -1.4
CIRBP-243ENST00000593128 LCE3AQ5TA76 89 aa6.31□□□□□ -1.4
CIRBP-243ENST00000593128 C10orf95Q9H7T3 257 aa6.31□□□□□ -1.4
CIRBP-243ENST00000593128 KRTAP4-3Q9BYR4 195 aa6.3□□□□□ -1.4
CIRBP-243ENST00000593128 TNP1P09430 55 aa6.27□□□□□ -1.41
CIRBP-243ENST00000593128 K7ERS5 55 aa6.24□□□□□ -1.41
CIRBP-243ENST00000593128 AHNAK2Q8IVF2 5795 aa6.22□□□□□ -1.41
CIRBP-243ENST00000593128 BRK1Q8WUW1 75 aa6.2□□□□□ -1.42
CIRBP-243ENST00000593128 KRTAP5-4Q6L8H1 288 aa6.13□□□□□ -1.43
CIRBP-243ENST00000593128 KRTAP4-6Q9BYQ5 205 aa6.13□□□□□ -1.43
CIRBP-243ENST00000593128 KRTAP4-7Q9BYR0 210 aa6.1□□□□□ -1.43
CIRBP-243ENST00000593128 KRTAP12-3P60328 96 aa6.05□□□□□ -1.44
CIRBP-243ENST00000593128 KRTAP5-10Q6L8G5 202 aa6.02□□□□□ -1.45
CIRBP-243ENST00000593128 ROMO1P60602 79 aa5.95□□□□□ -1.46
CIRBP-243ENST00000593128 PRO0628Q9UI54 55 aa5.91□□□□□ -1.46
CIRBP-243ENST00000593128 KRTAP25-1Q3LHN0 102 aa5.88□□□□□ -1.47
CIRBP-243ENST00000593128 KRTAP20-2Q3LI61 65 aa5.86□□□□□ -1.47
CIRBP-243ENST00000593128 KRTAP5-3Q6L8H2 238 aa5.86□□□□□ -1.47
CIRBP-243ENST00000593128 LOC100996750A0A140TA64 210 aa5.85□□□□□ -1.47
CIRBP-243ENST00000593128 PMAIP1Q13794 54 aa5.84□□□□□ -1.47
CIRBP-243ENST00000593128 KRTAP5-5Q701N2 237 aaPredicted RBP5.82□□□□□ -1.48
CIRBP-243ENST00000593128 KRTAP5-7Q6L8G8 165 aa5.81□□□□□ -1.48
CIRBP-243ENST00000593128 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
CIRBP-243ENST00000593128 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
CIRBP-243ENST00000593128 KRTAP23-1A1A580 65 aa5.69□□□□□ -1.5
CIRBP-243ENST00000593128 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
CIRBP-243ENST00000593128 KRTAP15-1Q3LI76 137 aa5.58□□□□□ -1.52
CIRBP-243ENST00000593128 KRTAP19-4Q3LI73 84 aa5.56□□□□□ -1.52
CIRBP-243ENST00000593128 LCE3CQ5T5A8 94 aa5.54□□□□□ -1.52
CIRBP-243ENST00000593128 PRAC1Q96KF2 57 aa5.53□□□□□ -1.52
CIRBP-243ENST00000593128 KTN1-AS1Q86SY8 53 aa5.52□□□□□ -1.53
CIRBP-243ENST00000593128 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.54
CIRBP-243ENST00000593128 MT1AP04731 61 aa5.39□□□□□ -1.55
CIRBP-243ENST00000593128 KRTAP4-11Q9BYQ6 195 aa5.39□□□□□ -1.55
CIRBP-243ENST00000593128 KRTAP5-2Q701N4 177 aa5.34□□□□□ -1.55
CIRBP-243ENST00000593128 KRTAP9-4Q9BYQ2 154 aa5.24□□□□□ -1.57
CIRBP-243ENST00000593128 KRTAP9-6A8MVA2 160 aa5.22□□□□□ -1.57
CIRBP-243ENST00000593128 KRTAP6-2Q3LI66 62 aa5.22□□□□□ -1.57
CIRBP-243ENST00000593128 SVIPQ8NHG7 77 aa5.21□□□□□ -1.58
CIRBP-243ENST00000593128 KRTAP5-8O75690 187 aa5.2□□□□□ -1.58
CIRBP-243ENST00000593128 AHNAKQ09666 5890 aaKnown RBP5.17□□□□□ -1.58
CIRBP-243ENST00000593128 MUC5ACP98088 5654 aa5.12□□□□□ -1.59
CIRBP-243ENST00000593128 OBSCNQ5VST9 7968 aa5.11□□□□□ -1.59
CIRBP-243ENST00000593128 MUC5BQ9HC84 5762 aaPredicted RBP5.09□□□□□ -1.59
CIRBP-243ENST00000593128 KRTAP4-12Q9BQ66 201 aa5.05□□□□□ -1.6
CIRBP-243ENST00000593128 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
CIRBP-243ENST00000593128 MT3P25713 68 aa4.96□□□□□ -1.62
CIRBP-243ENST00000593128 KRTAP5-1Q6L8H4 278 aa4.84□□□□□ -1.63
CIRBP-243ENST00000593128 H3BS24 57 aa4.77□□□□□ -1.65
CIRBP-243ENST00000593128 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
CIRBP-243ENST00000593128 LCE1EQ5T753 118 aa4.54□□□□□ -1.68
CIRBP-243ENST00000593128 LUZP6Q538Z0 58 aa4.52□□□□□ -1.69
CIRBP-243ENST00000593128 LCE1BQ5T7P3 118 aa4.43□□□□□ -1.7
CIRBP-243ENST00000593128 NDUFAF8A1L188 74 aa4.23□□□□□ -1.73
CIRBP-243ENST00000593128 LCE1CQ5T751 118 aa4.22□□□□□ -1.73
CIRBP-243ENST00000593128 LCE3DQ9BYE3 92 aa3.97□□□□□ -1.77
CIRBP-243ENST00000593128 KRTAP5-11Q6L8G4 156 aa3.84□□□□□ -1.79
CIRBP-243ENST00000593128 A0A0A0MQY5 61 aa3.82□□□□□ -1.8
CIRBP-243ENST00000593128 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.79□□□□□ -1.8
CIRBP-243ENST00000593128 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
CIRBP-243ENST00000593128 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
CIRBP-243ENST00000593128 PHGR1C9JFL3 82 aa3.58□□□□□ -1.84
CIRBP-243ENST00000593128 KRTAP21-2Q3LI59 83 aa3.52□□□□□ -1.85
CIRBP-243ENST00000593128 INE1O15225 51 aa3.48□□□□□ -1.85
CIRBP-243ENST00000593128 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
CIRBP-243ENST00000593128 MUC19Q7Z5P9 8384 aa3.16□□□□□ -1.9
CIRBP-243ENST00000593128 PRM1P04553 51 aa3.08□□□□□ -1.92
CIRBP-243ENST00000593128 KRTAP21-1Q3LI58 79 aa2.68□□□□□ -1.98
CIRBP-243ENST00000593128 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 10.1 ms