RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, human

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-218	ENST00000593053	LCE5A	Q5TCM9	118 aa		4.87	□□□□□ -1.63
PRKCSH-218	ENST00000593053	KRTAP19-3	Q7Z4W3	81 aa		4.85	□□□□□ -1.63
PRKCSH-218	ENST00000593053	KRTAP19-5	Q3LI72	72 aa		4.79	□□□□□ -1.64
PRKCSH-218	ENST00000593053		K7ERS5	55 aa		4.78	□□□□□ -1.64
PRKCSH-218	ENST00000593053	GPR98	Q8WXG9	6306 aa		4.78	□□□□□ -1.64
PRKCSH-218	ENST00000593053	PMAIP1	Q13794	54 aa		4.77	□□□□□ -1.65
PRKCSH-218	ENST00000593053	C10orf95	Q9H7T3	257 aa		4.77	□□□□□ -1.65
PRKCSH-218	ENST00000593053	MT1G	P13640	62 aa		4.72	□□□□□ -1.65
PRKCSH-218	ENST00000593053	KRTAP4-9	Q9BYQ8	210 aa		4.72	□□□□□ -1.65
PRKCSH-218	ENST00000593053	PP632	Q6XCG6	107 aa		4.69	□□□□□ -1.66
PRKCSH-218	ENST00000593053	ROMO1	P60602	79 aa		4.68	□□□□□ -1.66
PRKCSH-218	ENST00000593053	MT1L	Q93083	61 aa		4.66	□□□□□ -1.66
PRKCSH-218	ENST00000593053	LCE3A	Q5TA76	89 aa		4.65	□□□□□ -1.67
PRKCSH-218	ENST00000593053	MT1M	Q8N339	61 aa		4.65	□□□□□ -1.67
PRKCSH-218	ENST00000593053	TNP1	P09430	55 aa		4.64	□□□□□ -1.67
PRKCSH-218	ENST00000593053	PRAC1	Q96KF2	57 aa		4.6	□□□□□ -1.67
PRKCSH-218	ENST00000593053	LCE1D	Q5T752	114 aa		4.59	□□□□□ -1.67
PRKCSH-218	ENST00000593053	KTN1-AS1	Q86SY8	53 aa		4.59	□□□□□ -1.67
PRKCSH-218	ENST00000593053	HMCN1	Q96RW7	5635 aa		4.58	□□□□□ -1.68
PRKCSH-218	ENST00000593053	KRTAP4-3	Q9BYR4	195 aa		4.57	□□□□□ -1.68
PRKCSH-218	ENST00000593053	LCE4A	Q5TA78	99 aa		4.56	□□□□□ -1.68
PRKCSH-218	ENST00000593053		H3BS24	57 aa		4.55	□□□□□ -1.68
PRKCSH-218	ENST00000593053	MT4	P47944	62 aa		4.54	□□□□□ -1.68
PRKCSH-218	ENST00000593053	KRTAP25-1	Q3LHN0	102 aa		4.52	□□□□□ -1.69
PRKCSH-218	ENST00000593053	KRTAP12-3	P60328	96 aa		4.47	□□□□□ -1.69
PRKCSH-218	ENST00000593053	KRTAP5-4	Q6L8H1	288 aa		4.46	□□□□□ -1.7
PRKCSH-218	ENST00000593053	KRTAP4-7	Q9BYR0	210 aa		4.44	□□□□□ -1.7
PRKCSH-218	ENST00000593053	AHNAK2	Q8IVF2	5795 aa		4.44	□□□□□ -1.7
PRKCSH-218	ENST00000593053	KRTAP4-6	Q9BYQ5	205 aa		4.4	□□□□□ -1.71
PRKCSH-218	ENST00000593053	KRTAP23-1	A1A580	65 aa		4.35	□□□□□ -1.71
PRKCSH-218	ENST00000593053	KRTAP5-10	Q6L8G5	202 aa		4.28	□□□□□ -1.72
PRKCSH-218	ENST00000593053	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.26	□□□□□ -1.73
PRKCSH-218	ENST00000593053	KRTAP20-2	Q3LI61	65 aa		4.22	□□□□□ -1.73
PRKCSH-218	ENST00000593053	LOC100996750	A0A140TA64	210 aa		4.21	□□□□□ -1.74
PRKCSH-218	ENST00000593053	SPRR5	A0A1B0GTR4	108 aa		4.19	□□□□□ -1.74
PRKCSH-218	ENST00000593053	KRTAP12-4	P60329	112 aa		4.18	□□□□□ -1.74
PRKCSH-218	ENST00000593053	KRTAP5-3	Q6L8H2	238 aa		4.18	□□□□□ -1.74
PRKCSH-218	ENST00000593053	KRTAP19-4	Q3LI73	84 aa		4.17	□□□□□ -1.74
PRKCSH-218	ENST00000593053	SYNE1	Q8NF91	8797 aa	Known RBP	4.16	□□□□□ -1.74
PRKCSH-218	ENST00000593053	KRTAP15-1	Q3LI76	137 aa		4.15	□□□□□ -1.75
PRKCSH-218	ENST00000593053	KRTAP5-7	Q6L8G8	165 aa		4.12	□□□□□ -1.75
PRKCSH-218	ENST00000593053	LCE3C	Q5T5A8	94 aa		4.1	□□□□□ -1.75
PRKCSH-218	ENST00000593053		A0A0A0MQY5	61 aa		4.04	□□□□□ -1.76
PRKCSH-218	ENST00000593053	MT1A	P04731	61 aa		3.96	□□□□□ -1.78
PRKCSH-218	ENST00000593053	KRTAP6-1	Q3LI64	71 aa		3.95	□□□□□ -1.78
PRKCSH-218	ENST00000593053	KRTAP5-2	Q701N4	177 aa		3.9	□□□□□ -1.79
PRKCSH-218	ENST00000593053	KRTAP9-6	A8MVA2	160 aa		3.88	□□□□□ -1.79
PRKCSH-218	ENST00000593053	KRTAP4-11	Q9BYQ6	195 aa		3.88	□□□□□ -1.79
PRKCSH-218	ENST00000593053	KRTAP9-4	Q9BYQ2	154 aa		3.83	□□□□□ -1.8
PRKCSH-218	ENST00000593053	KRTAP6-2	Q3LI66	62 aa		3.79	□□□□□ -1.8
PRKCSH-218	ENST00000593053	OBSCN	Q5VST9	7968 aa		3.78	□□□□□ -1.8
PRKCSH-218	ENST00000593053	KRTAP5-8	O75690	187 aa		3.73	□□□□□ -1.81
PRKCSH-218	ENST00000593053	AHNAK	Q09666	5890 aa	Known RBP	3.71	□□□□□ -1.82
PRKCSH-218	ENST00000593053	MUC5AC	P98088	5654 aa		3.67	□□□□□ -1.82
PRKCSH-218	ENST00000593053	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.67	□□□□□ -1.82
PRKCSH-218	ENST00000593053	MT3	P25713	68 aa		3.62	□□□□□ -1.83
PRKCSH-218	ENST00000593053	NDUFAF8	A1L188	74 aa		3.56	□□□□□ -1.84
PRKCSH-218	ENST00000593053	LUZP6	Q538Z0	58 aa		3.56	□□□□□ -1.84
PRKCSH-218	ENST00000593053	KRTAP9-9	Q9BYP9	154 aa		3.56	□□□□□ -1.84
PRKCSH-218	ENST00000593053	KRTAP5-1	Q6L8H4	278 aa		3.51	□□□□□ -1.85
PRKCSH-218	ENST00000593053	LCE1E	Q5T753	118 aa		3.33	□□□□□ -1.88
PRKCSH-218	ENST00000593053	LCE1B	Q5T7P3	118 aa		3.18	□□□□□ -1.9
PRKCSH-218	ENST00000593053	KRTAP4-2	Q9BYR5	136 aa		3.16	□□□□□ -1.9
PRKCSH-218	ENST00000593053	LCE1C	Q5T751	118 aa		3.09	□□□□□ -1.91
PRKCSH-218	ENST00000593053	LCE3D	Q9BYE3	92 aa		2.95	□□□□□ -1.94
PRKCSH-218	ENST00000593053	INE1	O15225	51 aa		2.91	□□□□□ -1.94
PRKCSH-218	ENST00000593053	KRTAP4-12	Q9BQ66	201 aa		2.91	□□□□□ -1.94
PRKCSH-218	ENST00000593053	LCE3E	Q5T5B0	92 aa		2.83	□□□□□ -1.96
PRKCSH-218	ENST00000593053	KRTAP5-11	Q6L8G4	156 aa		2.8	□□□□□ -1.96
PRKCSH-218	ENST00000593053	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.8	□□□□□ -1.96
PRKCSH-218	ENST00000593053	LCE1F	Q5T754	118 aa		2.73	□□□□□ -1.97
PRKCSH-218	ENST00000593053	KRTAP21-2	Q3LI59	83 aa		2.59	□□□□□ -1.99
PRKCSH-218	ENST00000593053	PHGR1	C9JFL3	82 aa		2.51	□□□□□ -2.01
PRKCSH-218	ENST00000593053	PRM1	P04553	51 aa		2.48	□□□□□ -2.01
PRKCSH-218	ENST00000593053	KRTAP4-4	Q9BYR3	166 aa		2.41	□□□□□ -2.02
PRKCSH-218	ENST00000593053	MUC19	Q7Z5P9	8384 aa		2.31	□□□□□ -2.04
PRKCSH-218	ENST00000593053	KRTAP21-1	Q3LI58	79 aa		1.9	□□□□□ -2.11
PRKCSH-218	ENST00000593053	MUC16	Q8WXI7	14507 aa		1.61	□□□□□ -2.15

Retrieved 78 of 20,778 RNA–protein pairs in 107.9 ms