RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 MT1EP04732 61 aa5.69□□□□□ -1.5
TRIM47-206ENST00000592942 LCE3BQ5TA77 95 aa5.69□□□□□ -1.5
TRIM47-206ENST00000592942 PRO0628Q9UI54 55 aa5.67□□□□□ -1.5
TRIM47-206ENST00000592942 KRTAP25-1Q3LHN0 102 aa5.66□□□□□ -1.5
TRIM47-206ENST00000592942 KRTAP19-5Q3LI72 72 aa5.65□□□□□ -1.5
TRIM47-206ENST00000592942 LCE5AQ5TCM9 118 aa5.61□□□□□ -1.51
TRIM47-206ENST00000592942 PMAIP1Q13794 54 aa5.6□□□□□ -1.51
TRIM47-206ENST00000592942 LCE3AQ5TA76 89 aa5.6□□□□□ -1.51
TRIM47-206ENST00000592942 KRTAP19-3Q7Z4W3 81 aa5.59□□□□□ -1.51
TRIM47-206ENST00000592942 KRTAP23-1A1A580 65 aa5.5□□□□□ -1.53
TRIM47-206ENST00000592942 MT1GP13640 62 aa5.49□□□□□ -1.53
TRIM47-206ENST00000592942 DSTQ03001 7570 aaKnown RBP5.49□□□□□ -1.53
TRIM47-206ENST00000592942 MT1LQ93083 61 aa5.47□□□□□ -1.53
TRIM47-206ENST00000592942 KRTAP4-9Q9BYQ8 210 aa5.43□□□□□ -1.54
TRIM47-206ENST00000592942 PP632Q6XCG6 107 aa5.41□□□□□ -1.54
TRIM47-206ENST00000592942 MT1MQ8N339 61 aa5.4□□□□□ -1.54
TRIM47-206ENST00000592942 KRTAP12-3P60328 96 aa5.37□□□□□ -1.55
TRIM47-206ENST00000592942 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
TRIM47-206ENST00000592942 KTN1-AS1Q86SY8 53 aa5.29□□□□□ -1.56
TRIM47-206ENST00000592942 PRAC1Q96KF2 57 aa5.25□□□□□ -1.57
TRIM47-206ENST00000592942 KRTAP4-7Q9BYR0 210 aa5.25□□□□□ -1.57
TRIM47-206ENST00000592942 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
TRIM47-206ENST00000592942 HMCN1Q96RW7 5635 aa5.24□□□□□ -1.57
TRIM47-206ENST00000592942 AHNAK2Q8IVF2 5795 aa5.16□□□□□ -1.58
TRIM47-206ENST00000592942 KRTAP15-1Q3LI76 137 aa5.13□□□□□ -1.59
TRIM47-206ENST00000592942 KRTAP5-10Q6L8G5 202 aa5.12□□□□□ -1.59
TRIM47-206ENST00000592942 MT4P47944 62 aa5.11□□□□□ -1.59
TRIM47-206ENST00000592942 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
TRIM47-206ENST00000592942 KRTAP19-4Q3LI73 84 aa5.09□□□□□ -1.59
TRIM47-206ENST00000592942 KRTAP5-4Q6L8H1 288 aa5.07□□□□□ -1.6
TRIM47-206ENST00000592942 KRTAP5-7Q6L8G8 165 aa5□□□□□ -1.61
TRIM47-206ENST00000592942 LCE3CQ5T5A8 94 aa4.98□□□□□ -1.61
TRIM47-206ENST00000592942 KRTAP5-5Q701N2 237 aaPredicted RBP4.97□□□□□ -1.61
TRIM47-206ENST00000592942 LOC100996750A0A140TA64 210 aa4.96□□□□□ -1.62
TRIM47-206ENST00000592942 SVIPQ8NHG7 77 aa4.96□□□□□ -1.62
TRIM47-206ENST00000592942 KRTAP4-6Q9BYQ5 205 aa4.93□□□□□ -1.62
TRIM47-206ENST00000592942 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
TRIM47-206ENST00000592942 SYNE1Q8NF91 8797 aaKnown RBP4.81□□□□□ -1.64
TRIM47-206ENST00000592942 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
TRIM47-206ENST00000592942 H3BS24 57 aa4.78□□□□□ -1.64
TRIM47-206ENST00000592942 KRTAP9-6A8MVA2 160 aa4.76□□□□□ -1.65
TRIM47-206ENST00000592942 KRTAP20-2Q3LI61 65 aa4.74□□□□□ -1.65
TRIM47-206ENST00000592942 KRTAP12-4P60329 112 aa4.71□□□□□ -1.66
TRIM47-206ENST00000592942 MT1AP04731 61 aa4.64□□□□□ -1.67
TRIM47-206ENST00000592942 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
TRIM47-206ENST00000592942 KRTAP9-4Q9BYQ2 154 aa4.49□□□□□ -1.69
TRIM47-206ENST00000592942 KRTAP5-2Q701N4 177 aa4.48□□□□□ -1.69
TRIM47-206ENST00000592942 AHNAKQ09666 5890 aaKnown RBP4.43□□□□□ -1.7
TRIM47-206ENST00000592942 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
TRIM47-206ENST00000592942 KRTAP6-2Q3LI66 62 aa4.37□□□□□ -1.71
TRIM47-206ENST00000592942 MUC5ACP98088 5654 aa4.36□□□□□ -1.71
TRIM47-206ENST00000592942 LUZP6Q538Z0 58 aa4.35□□□□□ -1.71
TRIM47-206ENST00000592942 MUC5BQ9HC84 5762 aaPredicted RBP4.34□□□□□ -1.71
TRIM47-206ENST00000592942 KRTAP5-8O75690 187 aa4.26□□□□□ -1.73
TRIM47-206ENST00000592942 MT3P25713 68 aa4.22□□□□□ -1.73
TRIM47-206ENST00000592942 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
TRIM47-206ENST00000592942 KRTAP9-9Q9BYP9 154 aa4.13□□□□□ -1.75
TRIM47-206ENST00000592942 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
TRIM47-206ENST00000592942 KRTAP5-1Q6L8H4 278 aa3.98□□□□□ -1.77
TRIM47-206ENST00000592942 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
TRIM47-206ENST00000592942 A0A0A0MQY5 61 aa3.85□□□□□ -1.79
TRIM47-206ENST00000592942 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
TRIM47-206ENST00000592942 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.83
TRIM47-206ENST00000592942 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
TRIM47-206ENST00000592942 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
TRIM47-206ENST00000592942 LCE3EQ5T5B0 92 aa3.54□□□□□ -1.84
TRIM47-206ENST00000592942 KRTAP4-12Q9BQ66 201 aa3.46□□□□□ -1.86
TRIM47-206ENST00000592942 INE1O15225 51 aa3.37□□□□□ -1.87
TRIM47-206ENST00000592942 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.3□□□□□ -1.88
TRIM47-206ENST00000592942 KRTAP5-11Q6L8G4 156 aa3.22□□□□□ -1.89
TRIM47-206ENST00000592942 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
TRIM47-206ENST00000592942 KRTAP21-2Q3LI59 83 aa3.07□□□□□ -1.92
TRIM47-206ENST00000592942 PHGR1C9JFL3 82 aa3□□□□□ -1.93
TRIM47-206ENST00000592942 PRM1P04553 51 aa2.93□□□□□ -1.94
TRIM47-206ENST00000592942 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
TRIM47-206ENST00000592942 MUC19Q7Z5P9 8384 aa2.59□□□□□ -2
TRIM47-206ENST00000592942 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
TRIM47-206ENST00000592942 MUC16Q8WXI7 14507 aa1.86□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 5.8 ms