RNA–Protein interactions for RNA: ENST00000592860.2

CFD-202, Transcript of complement factor D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CFD, Length 809 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFD-202ENST00000592860 MT4P47944 62 aa8.07□□□□□ -1.12
CFD-202ENST00000592860 TNP1P09430 55 aa8.04□□□□□ -1.12
CFD-202ENST00000592860 PRR15LQ9BU68 103 aa8.04□□□□□ -1.12
CFD-202ENST00000592860 LINC01558Q9Y6Z2 57 aa8.02□□□□□ -1.13
CFD-202ENST00000592860 AHNAK2Q8IVF2 5795 aa7.98□□□□□ -1.13
CFD-202ENST00000592860 KRTAP5-4Q6L8H1 288 aa7.94□□□□□ -1.14
CFD-202ENST00000592860 KRTAP4-7Q9BYR0 210 aa7.85□□□□□ -1.15
CFD-202ENST00000592860 KRTAP4-6Q9BYQ5 205 aa7.84□□□□□ -1.15
CFD-202ENST00000592860 KRTAP12-3P60328 96 aa7.8□□□□□ -1.16
CFD-202ENST00000592860 UQCR11O14957 56 aa7.74□□□□□ -1.17
CFD-202ENST00000592860 KRTAP5-10Q6L8G5 202 aa7.7□□□□□ -1.18
CFD-202ENST00000592860 PSPHP1O15172 72 aa7.62□□□□□ -1.19
CFD-202ENST00000592860 MIR22HGQ0VDD5 57 aa7.61□□□□□ -1.19
CFD-202ENST00000592860 Q1T7F1 81 aa7.61□□□□□ -1.19
CFD-202ENST00000592860 V9GYY9 64 aa7.6□□□□□ -1.19
CFD-202ENST00000592860 KRTAP5-5Q701N2 237 aaPredicted RBP7.57□□□□□ -1.2
CFD-202ENST00000592860 PCP4P48539 62 aa7.53□□□□□ -1.2
CFD-202ENST00000592860 KRTAP20-2Q3LI61 65 aa7.52□□□□□ -1.21
CFD-202ENST00000592860 KRTAP25-1Q3LHN0 102 aa7.5□□□□□ -1.21
CFD-202ENST00000592860 K7ERS5 55 aa7.48□□□□□ -1.21
CFD-202ENST00000592860 KRTAP5-3Q6L8H2 238 aa7.47□□□□□ -1.21
CFD-202ENST00000592860 LOC100996750A0A140TA64 210 aa7.44□□□□□ -1.22
CFD-202ENST00000592860 SPRR5A0A1B0GTR4 108 aa7.41□□□□□ -1.22
CFD-202ENST00000592860 KRTAP5-7Q6L8G8 165 aa7.4□□□□□ -1.22
CFD-202ENST00000592860 RPS28P62857 69 aaKnown RBP7.39□□□□□ -1.23
CFD-202ENST00000592860 SYNE1Q8NF91 8797 aaKnown RBP7.37□□□□□ -1.23
CFD-202ENST00000592860 KRTAP12-4P60329 112 aa7.35□□□□□ -1.23
CFD-202ENST00000592860 A6NED7 52 aa7.34□□□□□ -1.23
CFD-202ENST00000592860 KRTAP19-4Q3LI73 84 aa7.27□□□□□ -1.25
CFD-202ENST00000592860 KRTAP23-1A1A580 65 aa7.22□□□□□ -1.25
CFD-202ENST00000592860 KRTAP15-1Q3LI76 137 aa7.21□□□□□ -1.26
CFD-202ENST00000592860 LCE3CQ5T5A8 94 aa7.16□□□□□ -1.26
CFD-202ENST00000592860 CDC42SE1Q9NRR8 79 aa7.04□□□□□ -1.28
CFD-202ENST00000592860 KRTAP6-1Q3LI64 71 aa6.97□□□□□ -1.29
CFD-202ENST00000592860 MT1AP04731 61 aa6.96□□□□□ -1.3
CFD-202ENST00000592860 ROMO1P60602 79 aa6.96□□□□□ -1.3
CFD-202ENST00000592860 KRTAP5-2Q701N4 177 aa6.93□□□□□ -1.3
CFD-202ENST00000592860 KRTAP4-11Q9BYQ6 195 aa6.89□□□□□ -1.31
CFD-202ENST00000592860 KRTAP9-6A8MVA2 160 aa6.83□□□□□ -1.32
CFD-202ENST00000592860 KRTAP9-4Q9BYQ2 154 aa6.75□□□□□ -1.33
CFD-202ENST00000592860 KRTAP6-2Q3LI66 62 aa6.69□□□□□ -1.34
CFD-202ENST00000592860 KRTAP5-8O75690 187 aa6.68□□□□□ -1.34
CFD-202ENST00000592860 AHNAKQ09666 5890 aaKnown RBP6.63□□□□□ -1.35
CFD-202ENST00000592860 MUC5BQ9HC84 5762 aaPredicted RBP6.6□□□□□ -1.35
CFD-202ENST00000592860 OBSCNQ5VST9 7968 aa6.59□□□□□ -1.35
CFD-202ENST00000592860 MUC5ACP98088 5654 aa6.57□□□□□ -1.36
CFD-202ENST00000592860 BRK1Q8WUW1 75 aa6.54□□□□□ -1.36
CFD-202ENST00000592860 MT3P25713 68 aa6.36□□□□□ -1.39
CFD-202ENST00000592860 KRTAP9-9Q9BYP9 154 aa6.32□□□□□ -1.4
CFD-202ENST00000592860 KRTAP5-1Q6L8H4 278 aa6.26□□□□□ -1.41
CFD-202ENST00000592860 PMAIP1Q13794 54 aa6.13□□□□□ -1.43
CFD-202ENST00000592860 PRAC1Q96KF2 57 aa5.95□□□□□ -1.46
CFD-202ENST00000592860 LCE1EQ5T753 118 aa5.87□□□□□ -1.47
CFD-202ENST00000592860 PRO0628Q9UI54 55 aa5.83□□□□□ -1.48
CFD-202ENST00000592860 KRTAP4-2Q9BYR5 136 aa5.63□□□□□ -1.51
CFD-202ENST00000592860 LCE1BQ5T7P3 118 aa5.59□□□□□ -1.51
CFD-202ENST00000592860 KTN1-AS1Q86SY8 53 aa5.55□□□□□ -1.52
CFD-202ENST00000592860 LCE1CQ5T751 118 aa5.47□□□□□ -1.53
CFD-202ENST00000592860 SVIPQ8NHG7 77 aa5.3□□□□□ -1.56
CFD-202ENST00000592860 KRTAP4-12Q9BQ66 201 aa5.17□□□□□ -1.58
CFD-202ENST00000592860 LCE3DQ9BYE3 92 aa5.11□□□□□ -1.59
CFD-202ENST00000592860 KRTAP5-11Q6L8G4 156 aa4.98□□□□□ -1.61
CFD-202ENST00000592860 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.95□□□□□ -1.62
CFD-202ENST00000592860 LUZP6Q538Z0 58 aa4.86□□□□□ -1.63
CFD-202ENST00000592860 LCE1FQ5T754 118 aa4.84□□□□□ -1.63
CFD-202ENST00000592860 LCE3EQ5T5B0 92 aa4.77□□□□□ -1.65
CFD-202ENST00000592860 KRTAP21-2Q3LI59 83 aa4.59□□□□□ -1.67
CFD-202ENST00000592860 PHGR1C9JFL3 82 aa4.48□□□□□ -1.69
CFD-202ENST00000592860 KRTAP4-4Q9BYR3 166 aa4.26□□□□□ -1.73
CFD-202ENST00000592860 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
CFD-202ENST00000592860 MUC19Q7Z5P9 8384 aa4.06□□□□□ -1.76
CFD-202ENST00000592860 PRM1P04553 51 aa3.6□□□□□ -1.83
CFD-202ENST00000592860 H3BS24 57 aa3.49□□□□□ -1.85
CFD-202ENST00000592860 KRTAP21-1Q3LI58 79 aa3.38□□□□□ -1.87
CFD-202ENST00000592860 A0A0A0MQY5 61 aa3.34□□□□□ -1.87
CFD-202ENST00000592860 INE1O15225 51 aa3.29□□□□□ -1.88
CFD-202ENST00000592860 MUC16Q8WXI7 14507 aa2.86□□□□□ -1.95
Retrieved 77 of 20,778 RNA–protein pairs in 6.2 ms