RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 KRTAP12-4P60329 112 aa3.16□□□□□ -1.9
SMARCA4-218ENST00000592158 COA5Q86WW8 74 aa3.16□□□□□ -1.9
SMARCA4-218ENST00000592158 CAMK2N1Q7Z7J9 78 aa3.15□□□□□ -1.91
SMARCA4-218ENST00000592158 MT1MQ8N339 61 aa3.15□□□□□ -1.91
SMARCA4-218ENST00000592158 KRTAP4-3Q9BYR4 195 aa3.15□□□□□ -1.91
SMARCA4-218ENST00000592158 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
SMARCA4-218ENST00000592158 TMEM258P61165 79 aa3.12□□□□□ -1.91
SMARCA4-218ENST00000592158 KRTAP13-4Q3LI77 160 aa3.12□□□□□ -1.91
SMARCA4-218ENST00000592158 SEC61GP60059 68 aa3.05□□□□□ -1.92
SMARCA4-218ENST00000592158 KRTAP19-5Q3LI72 72 aa3.05□□□□□ -1.92
SMARCA4-218ENST00000592158 A0A0D9SG42 100 aa3.04□□□□□ -1.92
SMARCA4-218ENST00000592158 SERP1Q9Y6X1 66 aa3.04□□□□□ -1.92
SMARCA4-218ENST00000592158 LINC01558Q9Y6Z2 57 aa3.01□□□□□ -1.93
SMARCA4-218ENST00000592158 A0A1B0GU33 70 aa2.99□□□□□ -1.93
SMARCA4-218ENST00000592158 A0A1B0GU69 56 aa2.99□□□□□ -1.93
SMARCA4-218ENST00000592158 SPINT4Q6UDR6 99 aa2.99□□□□□ -1.93
SMARCA4-218ENST00000592158 MT1LQ93083 61 aa2.98□□□□□ -1.93
SMARCA4-218ENST00000592158 SPATA8Q6RVD6 105 aa2.97□□□□□ -1.93
SMARCA4-218ENST00000592158 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
SMARCA4-218ENST00000592158 PRR15LQ9BU68 103 aa2.97□□□□□ -1.93
SMARCA4-218ENST00000592158 PCP4P48539 62 aa2.96□□□□□ -1.94
SMARCA4-218ENST00000592158 RPS28P62857 69 aaKnown RBP2.94□□□□□ -1.94
SMARCA4-218ENST00000592158 V9GYY9 64 aa2.94□□□□□ -1.94
SMARCA4-218ENST00000592158 KRTAP12-1P59990 96 aa2.93□□□□□ -1.94
SMARCA4-218ENST00000592158 SMIM26A0A096LP01 95 aa2.92□□□□□ -1.94
SMARCA4-218ENST00000592158 Q1T7F1 81 aa2.92□□□□□ -1.94
SMARCA4-218ENST00000592158 KRTAP4-2Q9BYR5 136 aa2.91□□□□□ -1.94
SMARCA4-218ENST00000592158 C10orf95Q9H7T3 257 aa2.91□□□□□ -1.94
SMARCA4-218ENST00000592158 LCE3AQ5TA76 89 aa2.9□□□□□ -1.95
SMARCA4-218ENST00000592158 UQCR11O14957 56 aa2.89□□□□□ -1.95
SMARCA4-218ENST00000592158 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
SMARCA4-218ENST00000592158 A8MU10 97 aa2.84□□□□□ -1.95
SMARCA4-218ENST00000592158 TNP1P09430 55 aa2.84□□□□□ -1.95
SMARCA4-218ENST00000592158 MIR22HGQ0VDD5 57 aa2.8□□□□□ -1.96
SMARCA4-218ENST00000592158 PSPHP1O15172 72 aa2.79□□□□□ -1.96
SMARCA4-218ENST00000592158 KRTAP9-4Q9BYQ2 154 aa2.79□□□□□ -1.96
SMARCA4-218ENST00000592158 KRTAP12-3P60328 96 aa2.77□□□□□ -1.97
SMARCA4-218ENST00000592158 K7ERS5 55 aa2.73□□□□□ -1.97
SMARCA4-218ENST00000592158 A6NED7 52 aa2.72□□□□□ -1.97
SMARCA4-218ENST00000592158 CDC42SE1Q9NRR8 79 aa2.69□□□□□ -1.98
SMARCA4-218ENST00000592158 KRTAP25-1Q3LHN0 102 aa2.67□□□□□ -1.98
SMARCA4-218ENST00000592158 KRTAP23-1A1A580 65 aa2.66□□□□□ -1.98
SMARCA4-218ENST00000592158 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
SMARCA4-218ENST00000592158 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
SMARCA4-218ENST00000592158 ROMO1P60602 79 aa2.57□□□□□ -2
SMARCA4-218ENST00000592158 KRTAP19-4Q3LI73 84 aa2.57□□□□□ -2
SMARCA4-218ENST00000592158 KRTAP6-1Q3LI64 71 aa2.53□□□□□ -2
SMARCA4-218ENST00000592158 KRTAP15-1Q3LI76 137 aa2.53□□□□□ -2
SMARCA4-218ENST00000592158 LCE3CQ5T5A8 94 aa2.53□□□□□ -2
SMARCA4-218ENST00000592158 KRTAP4-12Q9BQ66 201 aa2.53□□□□□ -2
SMARCA4-218ENST00000592158 MT1AP04731 61 aa2.52□□□□□ -2.01
SMARCA4-218ENST00000592158 BRK1Q8WUW1 75 aa2.49□□□□□ -2.01
SMARCA4-218ENST00000592158 KRTAP9-6A8MVA2 160 aa2.4□□□□□ -2.03
SMARCA4-218ENST00000592158 PMAIP1Q13794 54 aa2.38□□□□□ -2.03
SMARCA4-218ENST00000592158 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
SMARCA4-218ENST00000592158 SVIPQ8NHG7 77 aa2.38□□□□□ -2.03
SMARCA4-218ENST00000592158 PRO0628Q9UI54 55 aa2.38□□□□□ -2.03
SMARCA4-218ENST00000592158 LCE1BQ5T7P3 118 aa2.34□□□□□ -2.03
SMARCA4-218ENST00000592158 LCE1EQ5T753 118 aa2.33□□□□□ -2.04
SMARCA4-218ENST00000592158 MT3P25713 68 aa2.31□□□□□ -2.04
SMARCA4-218ENST00000592158 LCE1FQ5T754 118 aa2.24□□□□□ -2.05
SMARCA4-218ENST00000592158 KTN1-AS1Q86SY8 53 aa2.22□□□□□ -2.05
SMARCA4-218ENST00000592158 PRAC1Q96KF2 57 aa2.2□□□□□ -2.06
SMARCA4-218ENST00000592158 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
SMARCA4-218ENST00000592158 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
SMARCA4-218ENST00000592158 MUC19Q7Z5P9 8384 aa1.99□□□□□ -2.09
SMARCA4-218ENST00000592158 LUZP6Q538Z0 58 aa1.9□□□□□ -2.11
SMARCA4-218ENST00000592158 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.84□□□□□ -2.11
SMARCA4-218ENST00000592158 LCE3DQ9BYE3 92 aa1.79□□□□□ -2.12
SMARCA4-218ENST00000592158 KRTAP4-4Q9BYR3 166 aa1.73□□□□□ -2.13
SMARCA4-218ENST00000592158 H3BS24 57 aa1.68□□□□□ -2.14
SMARCA4-218ENST00000592158 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
SMARCA4-218ENST00000592158 LCE3EQ5T5B0 92 aa1.66□□□□□ -2.14
SMARCA4-218ENST00000592158 NDUFAF8A1L188 74 aa1.65□□□□□ -2.15
SMARCA4-218ENST00000592158 A0A0A0MQY5 61 aa1.54□□□□□ -2.16
SMARCA4-218ENST00000592158 INE1O15225 51 aa1.42□□□□□ -2.18
SMARCA4-218ENST00000592158 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
SMARCA4-218ENST00000592158 PRM1P04553 51 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms