RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 LCE3AQ5TA76 89 aa5.1□□□□□ -1.59
CLIP3-205ENST00000592017 DSTQ03001 7570 aaKnown RBP5.09□□□□□ -1.59
CLIP3-205ENST00000592017 GPR98Q8WXG9 6306 aa5.08□□□□□ -1.6
CLIP3-205ENST00000592017 A6NED7 52 aa5.02□□□□□ -1.61
CLIP3-205ENST00000592017 K7ERS5 55 aa5.02□□□□□ -1.61
CLIP3-205ENST00000592017 MT1GP13640 62 aa4.98□□□□□ -1.61
CLIP3-205ENST00000592017 KRTAP4-9Q9BYQ8 210 aa4.97□□□□□ -1.61
CLIP3-205ENST00000592017 PP632Q6XCG6 107 aa4.96□□□□□ -1.62
CLIP3-205ENST00000592017 MT1LQ93083 61 aa4.96□□□□□ -1.62
CLIP3-205ENST00000592017 BRK1Q8WUW1 75 aa4.95□□□□□ -1.62
CLIP3-205ENST00000592017 CDC42SE1Q9NRR8 79 aa4.95□□□□□ -1.62
CLIP3-205ENST00000592017 MT1MQ8N339 61 aa4.92□□□□□ -1.62
CLIP3-205ENST00000592017 KRTAP25-1Q3LHN0 102 aa4.91□□□□□ -1.62
CLIP3-205ENST00000592017 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
CLIP3-205ENST00000592017 HMCN1Q96RW7 5635 aa4.86□□□□□ -1.63
CLIP3-205ENST00000592017 PRO0628Q9UI54 55 aa4.85□□□□□ -1.63
CLIP3-205ENST00000592017 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
CLIP3-205ENST00000592017 LCE1DQ5T752 114 aa4.83□□□□□ -1.64
CLIP3-205ENST00000592017 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
CLIP3-205ENST00000592017 MT4P47944 62 aa4.76□□□□□ -1.65
CLIP3-205ENST00000592017 KRTAP4-7Q9BYR0 210 aa4.75□□□□□ -1.65
CLIP3-205ENST00000592017 AHNAK2Q8IVF2 5795 aa4.73□□□□□ -1.65
CLIP3-205ENST00000592017 KRTAP5-4Q6L8H1 288 aa4.72□□□□□ -1.65
CLIP3-205ENST00000592017 PMAIP1Q13794 54 aa4.7□□□□□ -1.66
CLIP3-205ENST00000592017 ROMO1P60602 79 aa4.69□□□□□ -1.66
CLIP3-205ENST00000592017 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
CLIP3-205ENST00000592017 KRTAP4-6Q9BYQ5 205 aa4.65□□□□□ -1.67
CLIP3-205ENST00000592017 KRTAP15-1Q3LI76 137 aa4.6□□□□□ -1.67
CLIP3-205ENST00000592017 KRTAP19-4Q3LI73 84 aa4.53□□□□□ -1.68
CLIP3-205ENST00000592017 KRTAP5-5Q701N2 237 aaPredicted RBP4.53□□□□□ -1.68
CLIP3-205ENST00000592017 KRTAP5-10Q6L8G5 202 aa4.52□□□□□ -1.69
CLIP3-205ENST00000592017 LOC100996750A0A140TA64 210 aa4.49□□□□□ -1.69
CLIP3-205ENST00000592017 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
CLIP3-205ENST00000592017 KTN1-AS1Q86SY8 53 aa4.48□□□□□ -1.69
CLIP3-205ENST00000592017 KRTAP20-2Q3LI61 65 aa4.46□□□□□ -1.7
CLIP3-205ENST00000592017 SPRR5A0A1B0GTR4 108 aa4.42□□□□□ -1.7
CLIP3-205ENST00000592017 SYNE1Q8NF91 8797 aaKnown RBP4.42□□□□□ -1.7
CLIP3-205ENST00000592017 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.71
CLIP3-205ENST00000592017 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
CLIP3-205ENST00000592017 PRAC1Q96KF2 57 aa4.36□□□□□ -1.71
CLIP3-205ENST00000592017 KRTAP5-7Q6L8G8 165 aa4.34□□□□□ -1.71
CLIP3-205ENST00000592017 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
CLIP3-205ENST00000592017 MT1AP04731 61 aa4.22□□□□□ -1.73
CLIP3-205ENST00000592017 KRTAP6-1Q3LI64 71 aa4.2□□□□□ -1.74
CLIP3-205ENST00000592017 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
CLIP3-205ENST00000592017 KRTAP4-11Q9BYQ6 195 aa4.09□□□□□ -1.75
CLIP3-205ENST00000592017 KRTAP9-4Q9BYQ2 154 aa4.06□□□□□ -1.76
CLIP3-205ENST00000592017 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
CLIP3-205ENST00000592017 AHNAKQ09666 5890 aaKnown RBP3.98□□□□□ -1.77
CLIP3-205ENST00000592017 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
CLIP3-205ENST00000592017 MUC5BQ9HC84 5762 aaPredicted RBP3.91□□□□□ -1.78
CLIP3-205ENST00000592017 MUC5ACP98088 5654 aa3.88□□□□□ -1.79
CLIP3-205ENST00000592017 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
CLIP3-205ENST00000592017 MT3P25713 68 aa3.85□□□□□ -1.79
CLIP3-205ENST00000592017 KRTAP9-9Q9BYP9 154 aa3.73□□□□□ -1.81
CLIP3-205ENST00000592017 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
CLIP3-205ENST00000592017 H3BS24 57 aa3.7□□□□□ -1.82
CLIP3-205ENST00000592017 LUZP6Q538Z0 58 aa3.6□□□□□ -1.83
CLIP3-205ENST00000592017 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
CLIP3-205ENST00000592017 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
CLIP3-205ENST00000592017 NDUFAF8A1L188 74 aa3.46□□□□□ -1.86
CLIP3-205ENST00000592017 KRTAP4-2Q9BYR5 136 aa3.36□□□□□ -1.87
CLIP3-205ENST00000592017 KRTAP4-12Q9BQ66 201 aa3.35□□□□□ -1.87
CLIP3-205ENST00000592017 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
CLIP3-205ENST00000592017 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
CLIP3-205ENST00000592017 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
CLIP3-205ENST00000592017 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
CLIP3-205ENST00000592017 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
CLIP3-205ENST00000592017 KRTAP5-11Q6L8G4 156 aa2.96□□□□□ -1.94
CLIP3-205ENST00000592017 INE1O15225 51 aa2.91□□□□□ -1.94
CLIP3-205ENST00000592017 LCE1FQ5T754 118 aa2.88□□□□□ -1.95
CLIP3-205ENST00000592017 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
CLIP3-205ENST00000592017 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
CLIP3-205ENST00000592017 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
CLIP3-205ENST00000592017 PRM1P04553 51 aa2.43□□□□□ -2.02
CLIP3-205ENST00000592017 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
CLIP3-205ENST00000592017 KRTAP21-1Q3LI58 79 aa1.98□□□□□ -2.09
CLIP3-205ENST00000592017 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 68.8 ms