RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 SPRR2GQ9BYE4 73 aa3.34□□□□□ -1.87
VMP1-213ENST00000591877 CHKB-CPT1BH3BT56 60 aa3.33□□□□□ -1.88
VMP1-213ENST00000591877 Q1T7F1 81 aa3.32□□□□□ -1.88
VMP1-213ENST00000591877 KRTAP25-1Q3LHN0 102 aa3.32□□□□□ -1.88
VMP1-213ENST00000591877 Q5VV11 94 aa3.3□□□□□ -1.88
VMP1-213ENST00000591877 A6NN06 94 aa3.29□□□□□ -1.88
VMP1-213ENST00000591877 SPTSSBQ8NFR3 76 aa3.29□□□□□ -1.88
VMP1-213ENST00000591877 LINC01558Q9Y6Z2 57 aa3.28□□□□□ -1.88
VMP1-213ENST00000591877 PRR15LQ9BU68 103 aa3.24□□□□□ -1.89
VMP1-213ENST00000591877 CRIPTQ9P021 101 aa3.22□□□□□ -1.89
VMP1-213ENST00000591877 H0YAA0 97 aa3.21□□□□□ -1.9
VMP1-213ENST00000591877 A0A1B0GU69 56 aa3.2□□□□□ -1.9
VMP1-213ENST00000591877 NEBP20929 6669 aa3.19□□□□□ -1.9
VMP1-213ENST00000591877 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
VMP1-213ENST00000591877 P0C880 135 aa3.15□□□□□ -1.91
VMP1-213ENST00000591877 PMAIP1Q13794 54 aa3.15□□□□□ -1.91
VMP1-213ENST00000591877 KMT2DO14686 5537 aa3.14□□□□□ -1.91
VMP1-213ENST00000591877 UQCR11O14957 56 aa3.13□□□□□ -1.91
VMP1-213ENST00000591877 MT1XP80297 61 aa3.13□□□□□ -1.91
VMP1-213ENST00000591877 BRK1Q8WUW1 75 aa3.12□□□□□ -1.91
VMP1-213ENST00000591877 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
VMP1-213ENST00000591877 CDC42SE1Q9NRR8 79 aa3.11□□□□□ -1.91
VMP1-213ENST00000591877 KRTAP20-1Q3LI63 56 aa3.1□□□□□ -1.91
VMP1-213ENST00000591877 MDN1Q9NU22 5596 aa3.09□□□□□ -1.91
VMP1-213ENST00000591877 MIR22HGQ0VDD5 57 aa3.08□□□□□ -1.92
VMP1-213ENST00000591877 SPATA8Q6RVD6 105 aa3.08□□□□□ -1.92
VMP1-213ENST00000591877 PRO2289Q9P1D8 64 aa3.08□□□□□ -1.92
VMP1-213ENST00000591877 PLAC4Q8WY50 150 aa3.07□□□□□ -1.92
VMP1-213ENST00000591877 M0QZ58 72 aa3.06□□□□□ -1.92
VMP1-213ENST00000591877 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
VMP1-213ENST00000591877 SPRR2FQ96RM1 72 aa3.06□□□□□ -1.92
VMP1-213ENST00000591877 SPRR2EP22531 72 aa3.03□□□□□ -1.92
VMP1-213ENST00000591877 SPRR2BP35325 72 aa3.03□□□□□ -1.92
VMP1-213ENST00000591877 SPRR2AP35326 72 aa3.03□□□□□ -1.92
VMP1-213ENST00000591877 KRTAP8-1Q8IUC2 63 aa3.03□□□□□ -1.92
VMP1-213ENST00000591877 KRTAP2-3P0C7H8 128 aa3.02□□□□□ -1.93
VMP1-213ENST00000591877 KRTAP2-4Q9BYR9 128 aa3.02□□□□□ -1.93
VMP1-213ENST00000591877 LINC01554Q52M75 96 aa3.01□□□□□ -1.93
VMP1-213ENST00000591877 KRTAP13-4Q3LI77 160 aa3□□□□□ -1.93
VMP1-213ENST00000591877 PP632Q6XCG6 107 aa2.96□□□□□ -1.94
VMP1-213ENST00000591877 A0A0D9SG42 100 aa2.94□□□□□ -1.94
VMP1-213ENST00000591877 SPRR2DP22532 72 aa2.92□□□□□ -1.94
VMP1-213ENST00000591877 KRTAP2-1Q9BYU5 128 aa2.92□□□□□ -1.94
VMP1-213ENST00000591877 KRTAP12-1P59990 96 aa2.91□□□□□ -1.94
VMP1-213ENST00000591877 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
VMP1-213ENST00000591877 KTN1-AS1Q86SY8 53 aa2.87□□□□□ -1.95
VMP1-213ENST00000591877 ROMO1P60602 79 aa2.82□□□□□ -1.96
VMP1-213ENST00000591877 KRTAP19-7Q3SYF9 63 aa2.81□□□□□ -1.96
VMP1-213ENST00000591877 MT1EP04732 61 aa2.77□□□□□ -1.97
VMP1-213ENST00000591877 KRTAP19-3Q7Z4W3 81 aa2.75□□□□□ -1.97
VMP1-213ENST00000591877 C10orf95Q9H7T3 257 aa2.73□□□□□ -1.97
VMP1-213ENST00000591877 KRTAP19-5Q3LI72 72 aa2.71□□□□□ -1.98
VMP1-213ENST00000591877 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
VMP1-213ENST00000591877 TNP1P09430 55 aa2.67□□□□□ -1.98
VMP1-213ENST00000591877 MT1GP13640 62 aa2.67□□□□□ -1.98
VMP1-213ENST00000591877 MT1MQ8N339 61 aa2.65□□□□□ -1.99
VMP1-213ENST00000591877 MT1LQ93083 61 aa2.65□□□□□ -1.99
VMP1-213ENST00000591877 KRTAP21-2Q3LI59 83 aa2.61□□□□□ -1.99
VMP1-213ENST00000591877 MT4P47944 62 aa2.56□□□□□ -2
VMP1-213ENST00000591877 KRTAP12-3P60328 96 aa2.55□□□□□ -2
VMP1-213ENST00000591877 GPR98Q8WXG9 6306 aa2.55□□□□□ -2
VMP1-213ENST00000591877 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
VMP1-213ENST00000591877 KRTAP5-10Q6L8G5 202 aa2.46□□□□□ -2.02
VMP1-213ENST00000591877 KRTAP12-4P60329 112 aa2.44□□□□□ -2.02
VMP1-213ENST00000591877 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
VMP1-213ENST00000591877 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
VMP1-213ENST00000591877 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
VMP1-213ENST00000591877 KRTAP6-1Q3LI64 71 aa2.25□□□□□ -2.05
VMP1-213ENST00000591877 INE1O15225 51 aa2.24□□□□□ -2.05
VMP1-213ENST00000591877 MT1AP04731 61 aa2.24□□□□□ -2.05
VMP1-213ENST00000591877 KRTAP6-2Q3LI66 62 aa2.14□□□□□ -2.07
VMP1-213ENST00000591877 MUC5BQ9HC84 5762 aaPredicted RBP2.02□□□□□ -2.09
VMP1-213ENST00000591877 MUC5ACP98088 5654 aa2.02□□□□□ -2.09
VMP1-213ENST00000591877 AHNAKQ09666 5890 aaKnown RBP1.98□□□□□ -2.09
VMP1-213ENST00000591877 PRM1P04553 51 aa1.46□□□□□ -2.18
VMP1-213ENST00000591877 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
VMP1-213ENST00000591877 MUC16Q8WXI7 14507 aa1.2□□□□□ -2.22
VMP1-213ENST00000591877 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 57.7 ms