RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 KRTAP19-3Q7Z4W3 81 aa4.35□□□□□ -1.71
APOC1-206ENST00000590334 LCE5AQ5TCM9 118 aa4.33□□□□□ -1.72
APOC1-206ENST00000590334 PMAIP1Q13794 54 aa4.32□□□□□ -1.72
APOC1-206ENST00000590334 PRO0628Q9UI54 55 aa4.32□□□□□ -1.72
APOC1-206ENST00000590334 MT1LQ93083 61 aa4.31□□□□□ -1.72
APOC1-206ENST00000590334 MT1GP13640 62 aa4.29□□□□□ -1.72
APOC1-206ENST00000590334 SPRR2DP22532 72 aa4.28□□□□□ -1.72
APOC1-206ENST00000590334 KRTAP20-1Q3LI63 56 aa4.28□□□□□ -1.72
APOC1-206ENST00000590334 MT1MQ8N339 61 aa4.22□□□□□ -1.73
APOC1-206ENST00000590334 KRTAP2-3P0C7H8 128 aa4.21□□□□□ -1.74
APOC1-206ENST00000590334 KRTAP2-4Q9BYR9 128 aa4.21□□□□□ -1.74
APOC1-206ENST00000590334 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
APOC1-206ENST00000590334 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
APOC1-206ENST00000590334 LCE3BQ5TA77 95 aa4.15□□□□□ -1.75
APOC1-206ENST00000590334 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
APOC1-206ENST00000590334 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
APOC1-206ENST00000590334 KRTAP2-1Q9BYU5 128 aa4.1□□□□□ -1.75
APOC1-206ENST00000590334 DSTQ03001 7570 aaKnown RBP4.09□□□□□ -1.75
APOC1-206ENST00000590334 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
APOC1-206ENST00000590334 LCE3CQ5T5A8 94 aa4.07□□□□□ -1.76
APOC1-206ENST00000590334 PRAC1Q96KF2 57 aa4.06□□□□□ -1.76
APOC1-206ENST00000590334 KTN1-AS1Q86SY8 53 aa4.05□□□□□ -1.76
APOC1-206ENST00000590334 LOC100996750A0A140TA64 210 aa3.86□□□□□ -1.79
APOC1-206ENST00000590334 KRTAP5-5Q701N2 237 aaPredicted RBP3.86□□□□□ -1.79
APOC1-206ENST00000590334 KRTAP5-4Q6L8H1 288 aa3.85□□□□□ -1.79
APOC1-206ENST00000590334 LCE4AQ5TA78 99 aa3.84□□□□□ -1.79
APOC1-206ENST00000590334 KRTAP9-6A8MVA2 160 aa3.83□□□□□ -1.8
APOC1-206ENST00000590334 SVIPQ8NHG7 77 aa3.78□□□□□ -1.8
APOC1-206ENST00000590334 GPR98Q8WXG9 6306 aa3.76□□□□□ -1.81
APOC1-206ENST00000590334 KRTAP4-9Q9BYQ8 210 aa3.75□□□□□ -1.81
APOC1-206ENST00000590334 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
APOC1-206ENST00000590334 LCE1DQ5T752 114 aa3.73□□□□□ -1.81
APOC1-206ENST00000590334 MT4P47944 62 aa3.71□□□□□ -1.82
APOC1-206ENST00000590334 MT1AP04731 61 aa3.67□□□□□ -1.82
APOC1-206ENST00000590334 HMCN1Q96RW7 5635 aa3.67□□□□□ -1.82
APOC1-206ENST00000590334 KRTAP4-6Q9BYQ5 205 aa3.66□□□□□ -1.82
APOC1-206ENST00000590334 KRTAP12-4P60329 112 aa3.64□□□□□ -1.83
APOC1-206ENST00000590334 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
APOC1-206ENST00000590334 KRTAP20-2Q3LI61 65 aa3.59□□□□□ -1.83
APOC1-206ENST00000590334 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
APOC1-206ENST00000590334 KRTAP9-4Q9BYQ2 154 aa3.52□□□□□ -1.85
APOC1-206ENST00000590334 KRTAP5-3Q6L8H2 238 aa3.49□□□□□ -1.85
APOC1-206ENST00000590334 KRTAP5-2Q701N4 177 aa3.44□□□□□ -1.86
APOC1-206ENST00000590334 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.86
APOC1-206ENST00000590334 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.87
APOC1-206ENST00000590334 LUZP6Q538Z0 58 aa3.38□□□□□ -1.87
APOC1-206ENST00000590334 MT3P25713 68 aa3.34□□□□□ -1.87
APOC1-206ENST00000590334 KRTAP5-10Q6L8G5 202 aa3.34□□□□□ -1.87
APOC1-206ENST00000590334 KRTAP5-7Q6L8G8 165 aa3.26□□□□□ -1.89
APOC1-206ENST00000590334 KRTAP4-11Q9BYQ6 195 aa3.19□□□□□ -1.9
APOC1-206ENST00000590334 H3BS24 57 aa3.1□□□□□ -1.91
APOC1-206ENST00000590334 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
APOC1-206ENST00000590334 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
APOC1-206ENST00000590334 NDUFAF8A1L188 74 aa3.04□□□□□ -1.92
APOC1-206ENST00000590334 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
APOC1-206ENST00000590334 KRTAP5-1Q6L8H4 278 aa3.01□□□□□ -1.93
APOC1-206ENST00000590334 LCE3DQ9BYE3 92 aa3□□□□□ -1.93
APOC1-206ENST00000590334 AHNAKQ09666 5890 aaKnown RBP2.9□□□□□ -1.94
APOC1-206ENST00000590334 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
APOC1-206ENST00000590334 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
APOC1-206ENST00000590334 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
APOC1-206ENST00000590334 KRTAP9-9Q9BYP9 154 aa2.84□□□□□ -1.95
APOC1-206ENST00000590334 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
APOC1-206ENST00000590334 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
APOC1-206ENST00000590334 KRTAP4-2Q9BYR5 136 aa2.8□□□□□ -1.96
APOC1-206ENST00000590334 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.6□□□□□ -1.99
APOC1-206ENST00000590334 A0A0A0MQY5 61 aa2.59□□□□□ -1.99
APOC1-206ENST00000590334 INE1O15225 51 aa2.54□□□□□ -2
APOC1-206ENST00000590334 KRTAP5-11Q6L8G4 156 aa2.5□□□□□ -2.01
APOC1-206ENST00000590334 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.03
APOC1-206ENST00000590334 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
APOC1-206ENST00000590334 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
APOC1-206ENST00000590334 PRM1P04553 51 aa2.33□□□□□ -2.04
APOC1-206ENST00000590334 PHGR1C9JFL3 82 aa2.15□□□□□ -2.07
APOC1-206ENST00000590334 KRTAP4-4Q9BYR3 166 aa2.1□□□□□ -2.07
APOC1-206ENST00000590334 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
APOC1-206ENST00000590334 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
APOC1-206ENST00000590334 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 10.7 ms