RNA–Protein interactions for RNA: ENST00000590205.2

CACNA1A-210, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-210ENST00000590205 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
CACNA1A-210ENST00000590205 FCGBPQ9Y6R7 5405 aaPredicted RBP3.34□□□□□ -1.87
CACNA1A-210ENST00000590205 KRTAP5-9P26371 169 aa3.33□□□□□ -1.88
CACNA1A-210ENST00000590205 MT1XP80297 61 aa3.33□□□□□ -1.88
CACNA1A-210ENST00000590205 KRTAP4-11Q9BYQ6 195 aa3.31□□□□□ -1.88
CACNA1A-210ENST00000590205 LCE3AQ5TA76 89 aa3.31□□□□□ -1.88
CACNA1A-210ENST00000590205 KRTAP9-7A8MTY7 169 aa3.29□□□□□ -1.88
CACNA1A-210ENST00000590205 MACF1Q9UPN3 7388 aaKnown RBP3.25□□□□□ -1.89
CACNA1A-210ENST00000590205 KRTAP10-12P60413 245 aa3.22□□□□□ -1.89
CACNA1A-210ENST00000590205 SYNE2Q8WXH0 6885 aaKnown RBP3.16□□□□□ -1.9
CACNA1A-210ENST00000590205 KRTAP10-7P60409 375 aaPredicted RBP3.16□□□□□ -1.9
CACNA1A-210ENST00000590205 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
CACNA1A-210ENST00000590205 LCE4AQ5TA78 99 aa3.14□□□□□ -1.91
CACNA1A-210ENST00000590205 KRTAP19-4Q3LI73 84 aa3.1□□□□□ -1.91
CACNA1A-210ENST00000590205 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
CACNA1A-210ENST00000590205 KMT2DO14686 5537 aa3.05□□□□□ -1.92
CACNA1A-210ENST00000590205 KRTAP2-3P0C7H8 128 aa3.04□□□□□ -1.92
CACNA1A-210ENST00000590205 KRTAP2-4Q9BYR9 128 aa3.04□□□□□ -1.92
CACNA1A-210ENST00000590205 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
CACNA1A-210ENST00000590205 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
CACNA1A-210ENST00000590205 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
CACNA1A-210ENST00000590205 KRTAP20-1Q3LI63 56 aa2.99□□□□□ -1.93
CACNA1A-210ENST00000590205 KRTAP19-7Q3SYF9 63 aa2.99□□□□□ -1.93
CACNA1A-210ENST00000590205 NEBP20929 6669 aa2.98□□□□□ -1.93
CACNA1A-210ENST00000590205 KRTAP2-1Q9BYU5 128 aa2.97□□□□□ -1.93
CACNA1A-210ENST00000590205 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
CACNA1A-210ENST00000590205 HMCN1Q96RW7 5635 aa2.94□□□□□ -1.94
CACNA1A-210ENST00000590205 MDN1Q9NU22 5596 aa2.92□□□□□ -1.94
CACNA1A-210ENST00000590205 LCE5AQ5TCM9 118 aa2.92□□□□□ -1.94
CACNA1A-210ENST00000590205 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
CACNA1A-210ENST00000590205 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.95
CACNA1A-210ENST00000590205 KRTAP5-7Q6L8G8 165 aa2.9□□□□□ -1.95
CACNA1A-210ENST00000590205 MT1EP04732 61 aa2.88□□□□□ -1.95
CACNA1A-210ENST00000590205 MT1LQ93083 61 aa2.88□□□□□ -1.95
CACNA1A-210ENST00000590205 SPRR2FQ96RM1 72 aa2.86□□□□□ -1.95
CACNA1A-210ENST00000590205 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
CACNA1A-210ENST00000590205 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
CACNA1A-210ENST00000590205 DSTQ03001 7570 aaKnown RBP2.81□□□□□ -1.96
CACNA1A-210ENST00000590205 SPRR2EP22531 72 aa2.8□□□□□ -1.96
CACNA1A-210ENST00000590205 SPRR2BP35325 72 aa2.8□□□□□ -1.96
CACNA1A-210ENST00000590205 SPRR2AP35326 72 aa2.8□□□□□ -1.96
CACNA1A-210ENST00000590205 OBSCNQ5VST9 7968 aa2.75□□□□□ -1.97
CACNA1A-210ENST00000590205 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
CACNA1A-210ENST00000590205 KRTAP19-3Q7Z4W3 81 aa2.72□□□□□ -1.97
CACNA1A-210ENST00000590205 SPRR2DP22532 72 aa2.7□□□□□ -1.98
CACNA1A-210ENST00000590205 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
CACNA1A-210ENST00000590205 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
CACNA1A-210ENST00000590205 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.69□□□□□ -1.98
CACNA1A-210ENST00000590205 MT1MQ8N339 61 aa2.67□□□□□ -1.98
CACNA1A-210ENST00000590205 MT1GP13640 62 aa2.67□□□□□ -1.98
CACNA1A-210ENST00000590205 AHNAKQ09666 5890 aaKnown RBP2.63□□□□□ -1.99
CACNA1A-210ENST00000590205 KRTAP4-3Q9BYR4 195 aa2.57□□□□□ -2
CACNA1A-210ENST00000590205 SYNE1Q8NF91 8797 aaKnown RBP2.56□□□□□ -2
CACNA1A-210ENST00000590205 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
CACNA1A-210ENST00000590205 MT1AP04731 61 aa2.55□□□□□ -2
CACNA1A-210ENST00000590205 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
CACNA1A-210ENST00000590205 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
CACNA1A-210ENST00000590205 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
CACNA1A-210ENST00000590205 KRTAP5-2Q701N4 177 aa2.43□□□□□ -2.02
CACNA1A-210ENST00000590205 KRTAP6-1Q3LI64 71 aa2.4□□□□□ -2.03
CACNA1A-210ENST00000590205 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
CACNA1A-210ENST00000590205 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
CACNA1A-210ENST00000590205 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
CACNA1A-210ENST00000590205 MT4P47944 62 aa2.34□□□□□ -2.04
CACNA1A-210ENST00000590205 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
CACNA1A-210ENST00000590205 KRTAP20-2Q3LI61 65 aa2.3□□□□□ -2.04
CACNA1A-210ENST00000590205 PRM1P04553 51 aa2.26□□□□□ -2.05
CACNA1A-210ENST00000590205 MT3P25713 68 aa2.15□□□□□ -2.07
CACNA1A-210ENST00000590205 KRTAP5-11Q6L8G4 156 aa2.12□□□□□ -2.07
CACNA1A-210ENST00000590205 KRTAP6-2Q3LI66 62 aa2.11□□□□□ -2.07
CACNA1A-210ENST00000590205 MUC5ACP98088 5654 aa2.05□□□□□ -2.08
CACNA1A-210ENST00000590205 KRTAP4-4Q9BYR3 166 aa2.04□□□□□ -2.08
CACNA1A-210ENST00000590205 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
CACNA1A-210ENST00000590205 LCE1BQ5T7P3 118 aa1.84□□□□□ -2.11
CACNA1A-210ENST00000590205 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
CACNA1A-210ENST00000590205 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
CACNA1A-210ENST00000590205 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
CACNA1A-210ENST00000590205 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 95.5 ms