RNA–Protein interactions for RNA: ENST00000590060.5

POLR2E-207, Transcript of RNA polymerase II subunit E, humanhuman

TSL 5

Gene POLR2E, Length 1,052 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-207ENST00000590060 KRTAP19-3Q7Z4W3 81 aa6.78□□□□□ -1.32
POLR2E-207ENST00000590060 LCE3CQ5T5A8 94 aa6.77□□□□□ -1.33
POLR2E-207ENST00000590060 MT1GP13640 62 aa6.72□□□□□ -1.33
POLR2E-207ENST00000590060 SPRR5A0A1B0GTR4 108 aa6.7□□□□□ -1.34
POLR2E-207ENST00000590060 MUC12Q9UKN1 5478 aa6.7□□□□□ -1.34
POLR2E-207ENST00000590060 LUZP6Q538Z0 58 aa6.66□□□□□ -1.34
POLR2E-207ENST00000590060 SPRR2EP22531 72 aa6.63□□□□□ -1.35
POLR2E-207ENST00000590060 SPRR2BP35325 72 aa6.63□□□□□ -1.35
POLR2E-207ENST00000590060 SPRR2AP35326 72 aa6.63□□□□□ -1.35
POLR2E-207ENST00000590060 LCE5AQ5TCM9 118 aa6.62□□□□□ -1.35
POLR2E-207ENST00000590060 MT1MQ8N339 61 aa6.61□□□□□ -1.35
POLR2E-207ENST00000590060 LCE1AQ5T7P2 110 aa6.59□□□□□ -1.35
POLR2E-207ENST00000590060 KRTAP9-7A8MTY7 169 aa6.58□□□□□ -1.36
POLR2E-207ENST00000590060 KRTAP4-7Q9BYR0 210 aa6.53□□□□□ -1.36
POLR2E-207ENST00000590060 MDN1Q9NU22 5596 aa6.51□□□□□ -1.37
POLR2E-207ENST00000590060 SPRR2DP22532 72 aa6.4□□□□□ -1.38
POLR2E-207ENST00000590060 NEBP20929 6669 aa6.38□□□□□ -1.39
POLR2E-207ENST00000590060 KRTAP4-3Q9BYR4 195 aa6.37□□□□□ -1.39
POLR2E-207ENST00000590060 NDUFAF8A1L188 74 aa6.31□□□□□ -1.4
POLR2E-207ENST00000590060 KRTAP9-6A8MVA2 160 aa6.27□□□□□ -1.41
POLR2E-207ENST00000590060 DSTQ03001 7570 aaKnown RBP6.16□□□□□ -1.42
POLR2E-207ENST00000590060 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
POLR2E-207ENST00000590060 LCE3BQ5TA77 95 aa6.12□□□□□ -1.43
POLR2E-207ENST00000590060 KRTAP2-3P0C7H8 128 aa5.96□□□□□ -1.46
POLR2E-207ENST00000590060 KRTAP2-4Q9BYR9 128 aa5.96□□□□□ -1.46
POLR2E-207ENST00000590060 KRTAP5-5Q701N2 237 aaPredicted RBP5.92□□□□□ -1.46
POLR2E-207ENST00000590060 KRTAP20-1Q3LI63 56 aa5.89□□□□□ -1.47
POLR2E-207ENST00000590060 MT1AP04731 61 aa5.87□□□□□ -1.47
POLR2E-207ENST00000590060 KRTAP2-1Q9BYU5 128 aa5.84□□□□□ -1.47
POLR2E-207ENST00000590060 KRTAP2-2Q9BYT5 123 aa5.83□□□□□ -1.48
POLR2E-207ENST00000590060 KRTAP6-1Q3LI64 71 aa5.74□□□□□ -1.49
POLR2E-207ENST00000590060 LCE4AQ5TA78 99 aa5.71□□□□□ -1.5
POLR2E-207ENST00000590060 KRTAP5-4Q6L8H1 288 aa5.69□□□□□ -1.5
POLR2E-207ENST00000590060 A0A0A0MQY5 61 aa5.68□□□□□ -1.5
POLR2E-207ENST00000590060 KRTAP12-4P60329 112 aa5.64□□□□□ -1.51
POLR2E-207ENST00000590060 SYNE1Q8NF91 8797 aaKnown RBP5.62□□□□□ -1.51
POLR2E-207ENST00000590060 KRTAP9-4Q9BYQ2 154 aa5.55□□□□□ -1.52
POLR2E-207ENST00000590060 MT4P47944 62 aa5.5□□□□□ -1.53
POLR2E-207ENST00000590060 H3BS24 57 aa5.43□□□□□ -1.54
POLR2E-207ENST00000590060 LCE1DQ5T752 114 aa5.4□□□□□ -1.54
POLR2E-207ENST00000590060 KRTAP4-9Q9BYQ8 210 aa5.4□□□□□ -1.54
POLR2E-207ENST00000590060 KRTAP4-6Q9BYQ5 205 aa5.38□□□□□ -1.55
POLR2E-207ENST00000590060 MT3P25713 68 aa5.36□□□□□ -1.55
POLR2E-207ENST00000590060 KRTAP20-2Q3LI61 65 aa5.35□□□□□ -1.55
POLR2E-207ENST00000590060 KRTAP6-2Q3LI66 62 aa5.32□□□□□ -1.56
POLR2E-207ENST00000590060 INE1O15225 51 aa5.3□□□□□ -1.56
POLR2E-207ENST00000590060 HMCN1Q96RW7 5635 aa5.3□□□□□ -1.56
POLR2E-207ENST00000590060 KRTAP5-2Q701N4 177 aa5.16□□□□□ -1.58
POLR2E-207ENST00000590060 KRTAP5-3Q6L8H2 238 aa5.11□□□□□ -1.59
POLR2E-207ENST00000590060 LCE3DQ9BYE3 92 aa5.1□□□□□ -1.59
POLR2E-207ENST00000590060 GPR98Q8WXG9 6306 aa5.08□□□□□ -1.6
POLR2E-207ENST00000590060 LCE3EQ5T5B0 92 aa4.97□□□□□ -1.61
POLR2E-207ENST00000590060 OBSCNQ5VST9 7968 aa4.87□□□□□ -1.63
POLR2E-207ENST00000590060 AHNAK2Q8IVF2 5795 aa4.8□□□□□ -1.64
POLR2E-207ENST00000590060 LCE1EQ5T753 118 aa4.65□□□□□ -1.67
POLR2E-207ENST00000590060 KRTAP4-11Q9BYQ6 195 aa4.64□□□□□ -1.67
POLR2E-207ENST00000590060 KRTAP5-10Q6L8G5 202 aa4.49□□□□□ -1.69
POLR2E-207ENST00000590060 KRTAP5-8O75690 187 aa4.44□□□□□ -1.7
POLR2E-207ENST00000590060 KRTAP5-1Q6L8H4 278 aa4.44□□□□□ -1.7
POLR2E-207ENST00000590060 LCE1BQ5T7P3 118 aa4.35□□□□□ -1.71
POLR2E-207ENST00000590060 MUC5ACP98088 5654 aa4.33□□□□□ -1.72
POLR2E-207ENST00000590060 KRTAP5-7Q6L8G8 165 aa4.32□□□□□ -1.72
POLR2E-207ENST00000590060 LCE1CQ5T751 118 aa4.3□□□□□ -1.72
POLR2E-207ENST00000590060 PRM1P04553 51 aa4.28□□□□□ -1.72
POLR2E-207ENST00000590060 KRTAP4-2Q9BYR5 136 aa4.26□□□□□ -1.73
POLR2E-207ENST00000590060 KRTAP9-9Q9BYP9 154 aa4.12□□□□□ -1.75
POLR2E-207ENST00000590060 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
POLR2E-207ENST00000590060 MUC5BQ9HC84 5762 aaPredicted RBP3.9□□□□□ -1.78
POLR2E-207ENST00000590060 AHNAKQ09666 5890 aaKnown RBP3.87□□□□□ -1.79
POLR2E-207ENST00000590060 KRTAP5-11Q6L8G4 156 aa3.82□□□□□ -1.8
POLR2E-207ENST00000590060 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
POLR2E-207ENST00000590060 KRTAP4-12Q9BQ66 201 aa3.53□□□□□ -1.84
POLR2E-207ENST00000590060 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
POLR2E-207ENST00000590060 KRTAP4-4Q9BYR3 166 aa3.31□□□□□ -1.88
POLR2E-207ENST00000590060 PHGR1C9JFL3 82 aa3.25□□□□□ -1.89
POLR2E-207ENST00000590060 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
POLR2E-207ENST00000590060 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
POLR2E-207ENST00000590060 MUC16Q8WXI7 14507 aa2.17□□□□□ -2.06
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms