RNA–Protein interactions for RNA: ENST00000590041.5

GPATCH8-207, Transcript of G-patch domain containing 8, humanhuman

TSL 5

Gene GPATCH8, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-207ENST00000590041 SYNE2Q8WXH0 6885 aaKnown RBP1.47□□□□□ -2.17
GPATCH8-207ENST00000590041 RPS29P62273 56 aaKnown RBP1.46□□□□□ -2.18
GPATCH8-207ENST00000590041 DNAH11Q96DT5 4516 aa1.46□□□□□ -2.18
GPATCH8-207ENST00000590041 MACF1Q9UPN3 7388 aaKnown RBP1.45□□□□□ -2.18
GPATCH8-207ENST00000590041 SRRM2Q9UQ35 2752 aaKnown RBP1.44□□□□□ -2.18
GPATCH8-207ENST00000590041 DMBT1Q9UGM3 2413 aaPredicted RBP1.44□□□□□ -2.18
GPATCH8-207ENST00000590041 KRTAP20-1Q3LI63 56 aa1.44□□□□□ -2.18
GPATCH8-207ENST00000590041 APOBP04114 4563 aaKnown RBP1.42□□□□□ -2.18
GPATCH8-207ENST00000590041 SSPOA2VEC9 5147 aa1.42□□□□□ -2.18
GPATCH8-207ENST00000590041 DNAH2Q9P225 4427 aa1.42□□□□□ -2.18
GPATCH8-207ENST00000590041 VPS13DQ5THJ4 4388 aa1.42□□□□□ -2.18
GPATCH8-207ENST00000590041 FAT1Q14517 4588 aa1.41□□□□□ -2.18
GPATCH8-207ENST00000590041 PKD1P98161 4303 aa1.41□□□□□ -2.18
GPATCH8-207ENST00000590041 DNAH17Q9UFH2 4485 aa1.41□□□□□ -2.18
GPATCH8-207ENST00000590041 AHNAK2Q8IVF2 5795 aa1.4□□□□□ -2.19
GPATCH8-207ENST00000590041 DNAH6Q9C0G6 4158 aa1.38□□□□□ -2.19
GPATCH8-207ENST00000590041 LRP1BQ9NZR2 4599 aa1.37□□□□□ -2.19
GPATCH8-207ENST00000590041 LRP2P98164 4655 aa1.36□□□□□ -2.19
GPATCH8-207ENST00000590041 TNP1P09430 55 aa1.36□□□□□ -2.19
GPATCH8-207ENST00000590041 VPS13BQ7Z7G8 4022 aa1.36□□□□□ -2.19
GPATCH8-207ENST00000590041 Q5VSD8 79 aa1.35□□□□□ -2.19
GPATCH8-207ENST00000590041 PKHD1L1Q86WI1 4243 aa1.34□□□□□ -2.19
GPATCH8-207ENST00000590041 DNAH5Q8TE73 4624 aa1.33□□□□□ -2.2
GPATCH8-207ENST00000590041 FAT3Q8TDW7 4589 aa1.33□□□□□ -2.2
GPATCH8-207ENST00000590041 AHNAKQ09666 5890 aaKnown RBP1.31□□□□□ -2.2
GPATCH8-207ENST00000590041 LRP1Q07954 4544 aaKnown RBP1.31□□□□□ -2.2
GPATCH8-207ENST00000590041 TNXBP22105 4242 aa1.28□□□□□ -2.2
GPATCH8-207ENST00000590041 SMR3BP02814 79 aaPredicted RBP1.28□□□□□ -2.2
GPATCH8-207ENST00000590041 MUC5BQ9HC84 5762 aaPredicted RBP1.26□□□□□ -2.21
GPATCH8-207ENST00000590041 LPAP08519 4548 aa1.25□□□□□ -2.21
GPATCH8-207ENST00000590041 KMT2DO14686 5537 aa1.24□□□□□ -2.21
GPATCH8-207ENST00000590041 USH2AO75445 5202 aa1.21□□□□□ -2.22
GPATCH8-207ENST00000590041 KRTAP2-3P0C7H8 128 aa1.21□□□□□ -2.22
GPATCH8-207ENST00000590041 KRTAP2-4Q9BYR9 128 aa1.21□□□□□ -2.22
GPATCH8-207ENST00000590041 DNAH8Q96JB1 4490 aa1.19□□□□□ -2.22
GPATCH8-207ENST00000590041 MT1HL1P0DM35 61 aa1.19□□□□□ -2.22
GPATCH8-207ENST00000590041 DSTQ03001 7570 aaKnown RBP1.17□□□□□ -2.22
GPATCH8-207ENST00000590041 KRTAP10-4P60372 401 aaPredicted RBP1.15□□□□□ -2.23
GPATCH8-207ENST00000590041 M0R2T5 61 aa1.14□□□□□ -2.23
GPATCH8-207ENST00000590041 KRTAP5-10Q6L8G5 202 aa1.14□□□□□ -2.23
GPATCH8-207ENST00000590041 KRTAP8-1Q8IUC2 63 aa1.13□□□□□ -2.23
GPATCH8-207ENST00000590041 KRTAP2-1Q9BYU5 128 aa1.13□□□□□ -2.23
GPATCH8-207ENST00000590041 MUC12Q9UKN1 5478 aa1.13□□□□□ -2.23
GPATCH8-207ENST00000590041 MUC17Q685J3 4493 aa1.12□□□□□ -2.23
GPATCH8-207ENST00000590041 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
GPATCH8-207ENST00000590041 MUC5ACP98088 5654 aa1.08□□□□□ -2.24
GPATCH8-207ENST00000590041 SPRR2GQ9BYE4 73 aa1.05□□□□□ -2.24
GPATCH8-207ENST00000590041 MDN1Q9NU22 5596 aa1.05□□□□□ -2.24
GPATCH8-207ENST00000590041 MT1HP80294 61 aa1.03□□□□□ -2.24
GPATCH8-207ENST00000590041 KRTAP19-2Q3LHN2 52 aa1.03□□□□□ -2.24
GPATCH8-207ENST00000590041 FLGP20930 4061 aaPredicted RBP1.01□□□□□ -2.25
GPATCH8-207ENST00000590041 KRTAP19-6Q3LI70 58 aa1□□□□□ -2.25
GPATCH8-207ENST00000590041 KRTAP19-5Q3LI72 72 aa0.99□□□□□ -2.25
GPATCH8-207ENST00000590041 MT1XP80297 61 aa0.96□□□□□ -2.26
GPATCH8-207ENST00000590041 KRTAP19-8Q3LI54 63 aa0.96□□□□□ -2.26
GPATCH8-207ENST00000590041 MT2AP02795 61 aa0.92□□□□□ -2.26
GPATCH8-207ENST00000590041 PRM1P04553 51 aa0.92□□□□□ -2.26
GPATCH8-207ENST00000590041 SPRR2EP22531 72 aa0.92□□□□□ -2.26
GPATCH8-207ENST00000590041 SPRR2BP35325 72 aa0.92□□□□□ -2.26
GPATCH8-207ENST00000590041 SPRR2AP35326 72 aa0.92□□□□□ -2.26
GPATCH8-207ENST00000590041 MT1FP04733 61 aa0.91□□□□□ -2.26
GPATCH8-207ENST00000590041 MT1BP07438 61 aa0.91□□□□□ -2.26
GPATCH8-207ENST00000590041 SPRR2DP22532 72 aa0.89□□□□□ -2.27
GPATCH8-207ENST00000590041 MT1EP04732 61 aa0.88□□□□□ -2.27
GPATCH8-207ENST00000590041 MT1LQ93083 61 aa0.88□□□□□ -2.27
GPATCH8-207ENST00000590041 MT1AP04731 61 aa0.87□□□□□ -2.27
GPATCH8-207ENST00000590041 MT1GP13640 62 aa0.84□□□□□ -2.27
GPATCH8-207ENST00000590041 SPRR2FQ96RM1 72 aa0.84□□□□□ -2.27
GPATCH8-207ENST00000590041 MT4P47944 62 aa0.83□□□□□ -2.28
GPATCH8-207ENST00000590041 KRTAP19-7Q3SYF9 63 aa0.83□□□□□ -2.28
GPATCH8-207ENST00000590041 KRTAP6-2Q3LI66 62 aa0.8□□□□□ -2.28
GPATCH8-207ENST00000590041 MT1MQ8N339 61 aa0.77□□□□□ -2.29
GPATCH8-207ENST00000590041 KRTAP19-3Q7Z4W3 81 aa0.75□□□□□ -2.29
GPATCH8-207ENST00000590041 KRTAP6-1Q3LI64 71 aa0.72□□□□□ -2.29
GPATCH8-207ENST00000590041 PHGR1C9JFL3 82 aa0.71□□□□□ -2.3
GPATCH8-207ENST00000590041 KRTAP20-2Q3LI61 65 aa0.7□□□□□ -2.3
GPATCH8-207ENST00000590041 SYNE1Q8NF91 8797 aaKnown RBP0.68□□□□□ -2.3
GPATCH8-207ENST00000590041 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
Retrieved 78 of 20,778 RNA–protein pairs in 85.6 ms